Idim027090.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- -
- Assembly
- GCA_949358125.1
- Location
- OX442345.1:7549175-7559984[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-07 0.00016 22.1 0.0 3 38 366 401 364 404 0.87 2 2 9.8 4.4e+03 -1.8 0.1 29 41 711 723 711 726 0.82
Sequence Information
- Coding Sequence
- ATGGAGACCTGTCAGGACTCAGACATGATACAAGCAGTGGTAGAGAATAAAGAGAATGATGTTACAGAAAAGGATGAAATAGAACCAGATAAGTCAGTAGAGATGGATGAAACTCTTGTGAATGATGATAGCAGTGTGGCATTAGAAAACCAGAAAGACGAGACTTACACAGTTAGTGAAGATGAAAAGTCAGATACGTCGGAATGTTCTTCGAATTTTGAGGAGTGTATTAGCGAAGAAGAAGTTATTTCTGTAAATGTGGAAAACCATGGAAAGCGTGTGAGAAAAGCACCACAGAGGTATGGTTACAGTAATGTGTGCATGATAAATGAAGATGTGGTCGAGGAATGTCTTACCTATGAGGAGGTGATAGGTGGTTCTGATCGAGAAGAGTGGTGTAAAGCAATGGACGAGGAGTTGCAGTCATTCCAAGATAACGATGCCTGGGAGATTGTGGACAAACCTAGTGATGCTTGTATAGTGCAGTGTAAATGGGTCTATAAAAAGAAGTTAAACAATGATAATACAGTGAGATATAGGGCCAGATTGGTTGCAAAAGGTTTTACACAAAAAGAAGGTTGTGTAGTTTCACATGAATGCAGAAAGCAGCAAACAGTGGCCCTCTCCAGCACAGAAGCGGAGTATATGGCGGTCTGTGAAGCCAGTAAGGAGGCAATTTTCCTAAGGAATCTGCTTTCTGAATTAATTGTAAACACAAATTCCAACAATGAGCCAATATTGTTATACAATGATAGTCAGAGTGCCCAAAAATTAACTGATAACGTGGGAATTGAAAGAGAATCCACAACTGACTATGAAATGAAATCGGAAGGGATTGAAGACGAACACTTTGAACACATCGAGTATTTGGACGAAGAAATCTTAGACTCAAACCGTATGAGAGATCGACcagTGAGGTTACCTCGCCGACGCCGCACCTTCCGCCGCGACTCTCGCGACGCGCCACACGACTCACGCGATGCACCACACGACTCGCGCGACGGTACCGACGCGTCGCCCGCTAGACACAAACCGAAATGGCCTCGGAAGCTGCCCCCTCAATTGCGCTACCAAACTTATAAACAGTACACAGCTGAAGACTTAAGAGATTGCATCGAAGCGATAAAGAGTGAAGAGATGTCCGTGAAGGAAGCGAGTGAATACTTCAGTATACCGAGCAAGACTCTGCAGAGGAAAATCAGGATGGGAATCTTAGaGGAAGAAAACCCGATACCGCTAACGAAGACCCTCGAGCTGATAGAAGATATCCAAGCTATACTGACGTACACCAACGCGACGCCTTTCAAGACCCGCTTCAACCAGATCCTGTGTGCCTTCTGTTCCGTCGAGTGTGGGGGGGACTTGAGGAGTCACACTCTGATACACCATCCCGACAGACTTGCCAGGGTGGAAGCGATGCTACGTCCCTACTTCCAGAACCAAATGCTACGGATCGACATCCAAGACTTGTCCTGCAGTCGCTGCTCGCTGCCCGCGCGGCGCATGTCAGACATGCTCCGACACCTGCGCACGGTGCATCGGGTATCACTTCGAATGGCGGCCACGAACATCGTCCCCTACTGCCTGACGCCTCACAACGCTTGCGCGATCTGCAACGAGACCTTCTCAGCTTTCAAAGTTCTCGACACGCATATGAACAACCATTTCAAGAACTACAGCTGCTCCGAATGCGGCGAACCGTTCATAACCCTACCTCGGTTGAAGAGCCATGAAAAAATTCAGGGATTGGGCCGATTTCCTTGTAATTATTGCAGCAGAGTTTTTGTGAGGAGACAGTATAGGAACCAGCATGTGTCCAAAGCGCACTCGAAACACGCCTCGTTTAAATGCAGTCATTGTTCGGATAGTTTTAAAACTGAGAGCCTTCGACAGAAACATATTATAGAATCTCACGCAGATAGGGTTAAAGTGATCAACTGTGAAATTTGTGGTGCGATATTCCATTTTGATGCTCAGTACAAGAAACATTTGAGACGTAAGCATAATATGGAGAACGCTTGTGAAGTTTGCGGGAAGACGTTTGAGAGTAAGTTTTTGTTGAGCGAACATAAACTGAGGCATACTAGAGTGAAAGATTTCTATTGTGATATTTGTAAGAAAAGTTACTTTTCAAAGACCAGTTTGCAGTCGCATTTGAAGAGGTGTaatcacagtttacttagtagttag
- Protein Sequence
- METCQDSDMIQAVVENKENDVTEKDEIEPDKSVEMDETLVNDDSSVALENQKDETYTVSEDEKSDTSECSSNFEECISEEEVISVNVENHGKRVRKAPQRYGYSNVCMINEDVVEECLTYEEVIGGSDREEWCKAMDEELQSFQDNDAWEIVDKPSDACIVQCKWVYKKKLNNDNTVRYRARLVAKGFTQKEGCVVSHECRKQQTVALSSTEAEYMAVCEASKEAIFLRNLLSELIVNTNSNNEPILLYNDSQSAQKLTDNVGIERESTTDYEMKSEGIEDEHFEHIEYLDEEILDSNRMRDRPVRLPRRRRTFRRDSRDAPHDSRDAPHDSRDGTDASPARHKPKWPRKLPPQLRYQTYKQYTAEDLRDCIEAIKSEEMSVKEASEYFSIPSKTLQRKIRMGILEEENPIPLTKTLELIEDIQAILTYTNATPFKTRFNQILCAFCSVECGGDLRSHTLIHHPDRLARVEAMLRPYFQNQMLRIDIQDLSCSRCSLPARRMSDMLRHLRTVHRVSLRMAATNIVPYCLTPHNACAICNETFSAFKVLDTHMNNHFKNYSCSECGEPFITLPRLKSHEKIQGLGRFPCNYCSRVFVRRQYRNQHVSKAHSKHASFKCSHCSDSFKTESLRQKHIIESHADRVKVINCEICGAIFHFDAQYKKHLRRKHNMENACEVCGKTFESKFLLSEHKLRHTRVKDFYCDICKKSYFSKTSLQSHLKRCNHSLLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837000;
- 90% Identity
- iTF_00837000;
- 80% Identity
- iTF_00837000;