Idim002545.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- clz9
- Assembly
- GCA_949358125.1
- Location
- OX442327.1:8434751-8437060[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-09 6e-07 29.8 0.1 2 39 15 52 14 57 0.93
Sequence Information
- Coding Sequence
- atgGTACGATActataaaagaaaaactactGATAAATACTCTCAAGAAACTCTACGCGAAGCAGTCAAAGCAGTACGGGAGCAGCAAATGACAGCTTTGAAAGCATCCAGAGTTTACAATGTTCCTAGAGCAACTATAATTTCACACGTAAATGGTGTTCGTGGTGTAAAATCGAAATCTCATGGGAGACCAACAGTTTTTTCAGAGAAGTTTGAGAAGAAAATGGCTTCAATGCTACATACAATGGAGCGCCACGGATTTGGACTAACCCAAAGAGAAATACGAGCTCTAGTCGGACAATATGTTCGTCGAAATAATATGGACACCCCCTTTACTAATGGGATTCCTGGGGAGGAGTGGATCAGAGCCTTccaaaaaagaaataagttgTCATTAAAAAAACCACAATCAGTAGAAATTGCAAGAAAGAAAGCCGCCGATCCCTTTGTTATCAATGAATTTTATGATTTACTACAAGGAATTATACAGGAGCAAAAATTAGAAGGCGATCAAATATGGAACCTGGACGAAACGAGTTTCTGCCAAGACCCTGGAAAATCTAAGATAGTAGGACTAAAAGGTTTTCAAGCCACTAGGACGACAAGCTCACCAGGTCGAGATAATACAACGGTGTTATTCGCTTGCAATGCCTACGGCGAAAAGGTTATgcctttgattatttttaaaggtaCTTATCTCTGGAACAGTTGGCTACCTGACGATGATTCAGGTAACCAACTAGCCGTTGCTTCTACTTCGAAAGGCTGGATGGAAGCTTCCGTTTTCGAaagctacttttcaaatgttttaattcCACAAATTTGCAAAACGGGCAAACCGCAACTAGTTATATATGACGGTCATTCTACGCATCTCGACTTAAATGTCATTATGAAAGCACACAATAGCAATATTACCCTGCTAAAATTGCCGCCACATTCGTCTCACATTTTACAACCGTTAGATGTGAGCACTATGAAAGCAATGAAAGATCGCTGGGACCAACAGTTGATAAAGTGGCAACGGCTTAATATTGGAAGAAAGttaccaaaaaaagaattcacCAAAATTTTGGTTGAAACCTGGAATGACCTCGAACCAGTTATAATAAGTAATGGGTTCCGAAAAACAGGAATTTATCCATTGGACAGGAACCAAATAGAAGAAGACAAATTTGACGCTGCGGCTCTGCTGCGTTGGAACAACCGAATAGAAACCCAGATTTTAACTcaacaagaagaagaaaaaacatcTGAAAAACCTCAAGAACAAAACAATAACagcgaagaaaaaataaatagtatagataaaaataatgaaatgtgTATTGACAGGGTAAAAGCAAAAGATCTTAACCAAATTAAACTTATTCCAAGAAAAAAAGGGGGCGActgtaatgttttaaaaataataagtaatgataaaatcataattaaaggaaaagaaaatattgatAGTATGAGTGAaggaaaagaaaatattgatAGTACTGAAGATGTATCTTTTGGAAGTTTATTACTTCAAACTATCTCAAGAGGAAAAGAAGAGcctaaacaaacaagaaaacgTATAGGAATAGGTGCTGAAGTAATTACCACAAAAGAGTACattgaaagaaagaagaaggaaATTGAAGAAAGAGataaaaagataaagataaaggaAGAGAAAGATAAAGGAGCGAAAAAAGTATCTAAAACCAATTTAAAGAAGCAACGAGCCAAAAAAATACAGCGCAAAAAATCTGTTACTACTAGTGAATCAGACATTATGAGCATACACTCTGATTCTGATATATTAGATGCTGGCAGTGATTCTGAGAGTGTTCCATGCCAAGAAACAGACTATCAACCCGAAAAATCTACACACACACTTACAGTACATGCTGATATCAACATTGAACCAAAACGGAGGTTGCAGAAGACATTTGACACAAAAAATGTCATTAACCACCAGCCGTTGACCAATGAAGAAATATTGAATGCGATAGAAACATACACGGATGAAAATAGCAATGACTTGATTTTGAAAGTAAAAGACACTGTTTTGGTTCGAtattacgaaaagaaaaaatggAAATACTATGTTGGAATAGTACAGCGTATTGAAAAAAATGATCGttacaaagttttttattacaaacattttgtAGACCAGAACAACGTAGTAAATTTTTCAATGCCAAAGAAACAAGACATTGATGTAGTTCCTATAACTGAAGTTGTGAAAAAAATTGAGTTAGTACAAAGCAAAGACAACCCTAATATTTTTACTCTGTTTGATGACCAAAATGATGTctattttttgtaa
- Protein Sequence
- MVRYYKRKTTDKYSQETLREAVKAVREQQMTALKASRVYNVPRATIISHVNGVRGVKSKSHGRPTVFSEKFEKKMASMLHTMERHGFGLTQREIRALVGQYVRRNNMDTPFTNGIPGEEWIRAFQKRNKLSLKKPQSVEIARKKAADPFVINEFYDLLQGIIQEQKLEGDQIWNLDETSFCQDPGKSKIVGLKGFQATRTTSSPGRDNTTVLFACNAYGEKVMPLIIFKGTYLWNSWLPDDDSGNQLAVASTSKGWMEASVFESYFSNVLIPQICKTGKPQLVIYDGHSTHLDLNVIMKAHNSNITLLKLPPHSSHILQPLDVSTMKAMKDRWDQQLIKWQRLNIGRKLPKKEFTKILVETWNDLEPVIISNGFRKTGIYPLDRNQIEEDKFDAAALLRWNNRIETQILTQQEEEKTSEKPQEQNNNSEEKINSIDKNNEMCIDRVKAKDLNQIKLIPRKKGGDCNVLKIISNDKIIIKGKENIDSMSEGKENIDSTEDVSFGSLLLQTISRGKEEPKQTRKRIGIGAEVITTKEYIERKKKEIEERDKKIKIKEEKDKGAKKVSKTNLKKQRAKKIQRKKSVTTSESDIMSIHSDSDILDAGSDSESVPCQETDYQPEKSTHTLTVHADINIEPKRRLQKTFDTKNVINHQPLTNEEILNAIETYTDENSNDLILKVKDTVLVRYYEKKKWKYYVGIVQRIEKNDRYKVFYYKHFVDQNNVVNFSMPKKQDIDVVPITEVVKKIELVQSKDNPNIFTLFDDQNDVYFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00836482; iTF_00836483; iTF_00836484; iTF_01209196; iTF_01208118; iTF_01208119; iTF_01209181;
- 90% Identity
- iTF_00836482; iTF_00836483; iTF_00836484; iTF_01209196; iTF_01208118; iTF_01208119; iTF_01209181;
- 80% Identity
- iTF_00836482; iTF_00836483; iTF_00836484;