Idim024267.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- clz9
- Assembly
- GCA_949358125.1
- Location
- OX442342.1:1474369-1494750[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-12 4e-09 36.8 0.0 1 42 14 55 14 58 0.92
Sequence Information
- Coding Sequence
- atggtgcggaattataaaaaaaaaacagaaacgcAATATACGCAGGACGACTTATTAAAAGCTATAGACGATGTTaggaaaaataaactaaacaccTATCAAGCAGCAGACGTTTACGGAATCCCGAGGTCTACTTTGGTTCACCGAATACGCGGATCACGAGGAGTAAAAAAATCATATCGTGGCAGGCCTACTGTTTTCACGAAAGAAACCGAAACCAAAATAGCCGGATATATCCACATACTCGAAAAAACAGGTTTTCCGTTAACGGTTCAAGAAGTAAGACTTTTGATATGTGATTATGTCAAAAGAAATGGCTTTATTACGCCTTTCAAGAATGATATGCCGGGCGATGACTGGTGCAAGGGGTTTAGGACCAGAAATAATCTCTCTTTAAAAAAACCCCAATCGGTGGAGACCGCAAGACGAAAGGCATGCAATCCTTTcattgtatatacctactacgaTTTATTACTGAAGACGCAGCAAGAATTAGAACTAACTGCAAAACcccaaaatatatataacttaGATGAGACCAGCTTTTGCTGTGATCCATCAAAAGCTAAAGTAATGGGACAGGTTGGATACCGTTCGACAAGAACTACTAGCTCACCTGGTAGAGACAATACCACAGTGCTTTTGGCTGCTAACGCTAAGGGTGGAAAGATTCCACCCTTAATCATTTTTCAAGGTAAACACCTTTGGAGTGAATGGGTATACAAAGATGAAACAGTCAAAACAGCATATGCAGTGAGCAGAAAAGGATGGATGAAAACatctatatttgaaaagtaTATTAAAGACGTTTTTATTCCCGCTATCGGCTCTGAAAGACCAGTACTTCTAATATATGATGGACATTCAACTCATTGTGATCCAAGTGTGATAGAACTTGCTGCAGCAAATGAGATAACGATTCTTAAATTACCACCCCACTCATCCCATATACTACAACCTTTGGATTGCAGCACAATGAAGCCTTTAAAAGATCGTTGGGAGAGTGAGCTTATCAAATGGCAAAGACTTCATGTAGGGGCTAAATTGCCTAAATCAGAATTCGCTAGAATTCTTACAAACATATGGGACAATTTAAACCCCGTAATTATCGAAAATGGTTTTATTAAGACAGGTACATTTCCTGCTAACCCAAACGCCATCTCGAAAGAAAATTTTGATGCACTGTCTTGGTCTAAATGGGAAGATCATCTACAGCAACAGTCTTTAAAACCAGATCAAGTAGAAGAGCGACCAGAAGAACAGATACCAAATGTCGTCACCCAATTGCCAAGCCTTGCAAGTTTAGCTTTAAaatttctctacctcctccccccgcTCCGGGTACTCCCCTTCGCTACACTGGCGCCCAACGTCGTCGGTCCCGAATCCTCGGAGCCCGGAGACTATAAAACAACAAGAGTCGTCGGAGGAGCCACCGGTAGAGCCAGCCAGAGTCGAGGTAGAGTCGACAGTAGAGCCGAAGTAGAGTCGACAGTAGAGTCGACAGTAGAGTCGACGGTAGAGTCGACAGTAGAGTCGACGGGAGAACCAGCAGCTTACATCATCATACGGTACTCCCCTTCGCTACATTGGCGTCCAACGTCGTCGGACCCGAATCCACGAAACCGTGAACAAGAAGAGTCGTCGGAGGAGTCATCGGTAGAGTCGAGGTAG
- Protein Sequence
- MVRNYKKKTETQYTQDDLLKAIDDVRKNKLNTYQAADVYGIPRSTLVHRIRGSRGVKKSYRGRPTVFTKETETKIAGYIHILEKTGFPLTVQEVRLLICDYVKRNGFITPFKNDMPGDDWCKGFRTRNNLSLKKPQSVETARRKACNPFIVYTYYDLLLKTQQELELTAKPQNIYNLDETSFCCDPSKAKVMGQVGYRSTRTTSSPGRDNTTVLLAANAKGGKIPPLIIFQGKHLWSEWVYKDETVKTAYAVSRKGWMKTSIFEKYIKDVFIPAIGSERPVLLIYDGHSTHCDPSVIELAAANEITILKLPPHSSHILQPLDCSTMKPLKDRWESELIKWQRLHVGAKLPKSEFARILTNIWDNLNPVIIENGFIKTGTFPANPNAISKENFDALSWSKWEDHLQQQSLKPDQVEERPEEQIPNVVTQLPSLASLALKFLYLLPPLRVLPFATLAPNVVGPESSEPGDYKTTRVVGGATGRASQSRGRVDSRAEVESTVESTVESTVESTVESTGEPAAYIIIRYSPSLHWRPTSSDPNPRNREQEESSEESSVESR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00836461;
- 90% Identity
- -
- 80% Identity
- -