Idim007759.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- bab1
- Assembly
- GCA_949358125.1
- Location
- OX442330.1:4616302-4624468[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-06 0.00092 19.6 0.0 3 35 39 72 37 77 0.91 2 2 6.1e-17 2.7e-14 53.3 0.0 1 43 198 241 198 243 0.95
Sequence Information
- Coding Sequence
- ATGCTGGAGAACTCCCAGGCGTGGATGGGAGCATCTACATCGTCATCAGCGCTGGCAGGAGAGGTCCCTGCTCATACGGTGAACGTGAAGATGAAGGCACCGCGATGGACAGACTCACAGCTACAGGAAGCGATTCAAGCAGTGGTCACCCAACGCATGCGATTTACCCAAGCAGCTTTCTTTTACGCCATACCAAAAGGCACTTTATACGATAATATTCTAGGAAAATCTAAACGTATGGCAGTGTTAGACGATGCAGCCCTCACTCCTGGCGAAGAACGGGTTGTCCTCGAATTCTGTTGCGAGACTAGTGTTACTCCTTACAATCGTAGAACCAAAAAATCACTCCGGGAAGTGCTAGCTTTTGTAGAAAAGCTGAGACGGACGAGGGACCCTGACTTTGCTTTCGTAGGCCTCACCGGCTTCCGTTGGTGGTGGGCTTTTTGTAAAAAACACTCCATCGTATCACTTTTCTACGAAGCAGAGACGTACCAGTATCGGATGCAGTCGCTGTGGCAGCAATGCTGGAGCACGAATCAGAACATGGTGCACAACCTGAGACTCAGAGAGCGCGGCCCACTCAAATCTTGGCGGCCTGAGACCATGGCTGAGGCAATATTCTCAGTACTGAAGGAGGGCCTCTCGCTCTCTCAAGCGGCGAGGAAGTACGACATACCGTATCCAACGTTCGTGCTCTACGCTAACCGAGTGCACAACATGCTTGGACCCAGCGCTGATGGAGGCGCAGATCTGAGACCGAAGGGCAGGGGACGTCCTCAGAGAATATTGTTGGGCTCTTGGCCGGACAATCACATTCGTGGCGTGATCAGAGCCGTCGTGTTCCGAGAGAACCACTCCGCTCCTCACACTCCTCAGCATCATCTGCGAGAAATGGAGATGCCAGTCTACCCCGCCATCACGGATGGCTCGAGCGTGGGGACAGCCGGTGGGAACGGCTGCGGTGGCGACGGTCGCGAGGGTCACGTGTCTCCGAACGCCGCCGCAGCCGCGGCGGTCGCCGCCGTGGCTCACAACTTGCGCCGGTCGATGTGCAATATGGTAGTGGCGGCGCAGCGACCAGGGGAACACGGAGCTCACGTAGCGTTGCCCTCCCTGCCGCTGCACTCGCCGCGCCTCGCTTCTCCGCTCACCGCCGGGCTGGAGTCTCCGTTGTgctcgccgccgccgccgccaggGCATGAGGCGGCTCGTCCCGCCGATCCGTTCCGGCCGTTCGCGGAGCCCCCGCCGGAGCGCCACGCTCCCGCTCCTCCCCACGAGATGGGCCCGCCCGAGACTCCGGTATCGCGCAACAACGGTCAAGGCGCTTCGCCCCTCGAGGCCGGCTCGCCGCCGGTCATCTGA
- Protein Sequence
- MLENSQAWMGASTSSSALAGEVPAHTVNVKMKAPRWTDSQLQEAIQAVVTQRMRFTQAAFFYAIPKGTLYDNILGKSKRMAVLDDAALTPGEERVVLEFCCETSVTPYNRRTKKSLREVLAFVEKLRRTRDPDFAFVGLTGFRWWWAFCKKHSIVSLFYEAETYQYRMQSLWQQCWSTNQNMVHNLRLRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGSWPDNHIRGVIRAVVFRENHSAPHTPQHHLREMEMPVYPAITDGSSVGTAGGNGCGGDGREGHVSPNAAAAAAVAAVAHNLRRSMCNMVVAAQRPGEHGAHVALPSLPLHSPRLASPLTAGLESPLCSPPPPPGHEAARPADPFRPFAEPPPERHAPAPPHEMGPPETPVSRNNGQGASPLEAGSPPVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -