Idim008671.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949358125.1
- Location
- OX442330.1:19536238-19578431[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-14 7.1e-12 45.6 0.0 1 38 273 311 273 317 0.94 2 2 3.3e-18 1.5e-15 57.3 0.0 1 43 479 522 479 524 0.95
Sequence Information
- Coding Sequence
- ATGCATCCGGATAAGTACGAGTACAATGACGCAATACCAGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACAATACCAGGACGCTCTAATACCGAAACGAAGCGAGGTCCAGTCAAGCGACGACGATTCCATGCCTTCCACCGACCAGCCTCCCGCTCTGAAGATCAAAACGATAGAGCAGATCAACGAAGACGACCGGAAAAGCCCGAAGCGTCCAGAGACCATCCTGGAGAGCCTGATCAAGAGGCCAGCGACGCAGCCGAAACTGGAGCTGACGGAGGAACCGACGGACTGGAAGCCGCCAGACAAATGCTACTTCTGTACTGACGGGGATAAGAGCGAACAACATCAAGAGGTCCAGCCACCGATGCCGCAGAGTCCAGCATCAGAATCGGACAGTAGTGAGGTGTCAGGAGCAAAGAGTCCCGCCACACCTGCGCCGCCACTGTTGCAGCATCTGTTGCAGCTGCAAGCACAGAACCCTCAAGCTATTGCGCAGTTTCAACAGATGGTCGCAACATTGGCGGCGCTCGGCACGGGAATGCTGCCGGCGCCTTTTGCTCAGAACTGGATGATGCCCCGGATGATGCAGAATAGAACACCTTGCGATAGCAGATTGAGCGAAGAGAAGACCGGACCCTCATCTCCGAGCCTGACGGAACAGCCTCTAGACCTCAGCGCCAAATCCACATCGAGCACCAGTGGTACACCGCCTCCTGATGTTAAGAACATGGACAACAGATTAAAAAGAGCCGCACCGGACGGTGTTGCGGGCAACTCATCAACAAAGCGCACCTACACCGAGGACGAGCTGGCGTCGGCACTGCGTGACATCCAGTCGGGTCGGTTGGGCACGCGGCGCGCCGCTGTCGTCTACGGCATCCCGCGCTCCACGCTGCGCAACAAGGTGAACAAGTTCGGGCTGGCGGCCGACCCGCCCGACTCCGAGCCCGAGAGCGAGCCCGAGCGGGTCGACTCACCGCCCTCCGTCATCCTCAAGATTCCCACGTTCCCGCCACCGGACGAGAAGAGCCCCGGCCCGGCGACGCCGGCACCGGCCCCGCACGCGCCGGTCACTCCACTCGCACCGCCTCATCAACCCTCGCTTGCTGCGCCTTCACAACTTTTACTGCCGCCTTCGGTGTACGCGGATCCACCTTCGACGCAGCACTTATTCACTTCTCTGAGCGACGTCATCGCCAAGAGTATCAGCCAGAAGTTCCAGCAGCCTCTGGAGCGCGGCCAGGGGTCGGATCTGTCGTTCATGCGCGCCCCGGACCGGCACGTGTCCGTGATCAAGACGCCGCCGGATGGCGGACGGTACGCCGCCGGCAActcgcgcgcgccgccgcccaACAACGGGCAACCCGCCGGAGGAAAAGGGACGCGGCCAAAACGTGGCAAGTACCGCAACTATGACCGAGATAGCCTCGTCGAAGCGGTGAAGGCGGTGCAGCGCGGCGAGATGTCCGTACACCGAGCCGGCTCCTACTACGGCGTCCCACACTCGACCCTCGAGTACAAGGTAAAAGAGAGGCACCTGATGCGGCCGCGTAAGCGCGAGCCGAAGCCGCAAGTCGACGTCAAGCCGCAGCCGGCGAAGCCTCCGCCGCCGAAGGCCGGGCCGAAGCCCTTCTCGAACGGAATGAACGGTCCGGACGGCGGTGGTGGATCGTACCCTGCGCCGCCCGGATATCCGTTCTGGGCCGGAGCTCAGTTCGCGCCGCCCCCAGCCCCGGATCTGTACGCATCGCACATGATGCGGCGGCTACGCGAGGAGGCCCCTGCCGCGCCGCCCGCGTCCAACGGCTCATTCCTGGAGGGTATAATCCGGTCGAGCCTGGAGCGGCCGGGCGCAGCGCTGCTCGCACGGCTGCAGGGCGAGGCGGCGCCCGGCGCGCTGCTCCGGCGGCTCGCGGACGAGCCTGACGCGCGGCTCGCGGCCGACATGCGCGACGCGGTGCAGCGCCTGCGCGCCGACAAGCTGCGCCCGCGCCAGGACGACACGCcccccgcgcccgcgccaccgCCCCCTCATCTCTAG
- Protein Sequence
- MHPDKYEYNDAIPGLERVAEELMGRRKWKQYQDALIPKRSEVQSSDDDSMPSTDQPPALKIKTIEQINEDDRKSPKRPETILESLIKRPATQPKLELTEEPTDWKPPDKCYFCTDGDKSEQHQEVQPPMPQSPASESDSSEVSGAKSPATPAPPLLQHLLQLQAQNPQAIAQFQQMVATLAALGTGMLPAPFAQNWMMPRMMQNRTPCDSRLSEEKTGPSSPSLTEQPLDLSAKSTSSTSGTPPPDVKNMDNRLKRAAPDGVAGNSSTKRTYTEDELASALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLAADPPDSEPESEPERVDSPPSVILKIPTFPPPDEKSPGPATPAPAPHAPVTPLAPPHQPSLAAPSQLLLPPSVYADPPSTQHLFTSLSDVIAKSISQKFQQPLERGQGSDLSFMRAPDRHVSVIKTPPDGGRYAAGNSRAPPPNNGQPAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQVDVKPQPAKPPPPKAGPKPFSNGMNGPDGGGGSYPAPPGYPFWAGAQFAPPPAPDLYASHMMRRLREEAPAAPPASNGSFLEGIIRSSLERPGAALLARLQGEAAPGALLRRLADEPDARLAADMRDAVQRLRADKLRPRQDDTPPAPAPPPPHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837396;
- 90% Identity
- iTF_00837396;
- 80% Identity
- -