Basic Information

Gene Symbol
ARID5B_1
Assembly
GCA_949358125.1
Location
OX442345.1:2281679-2295348[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-16 6.3e-13 49.6 0.3 2 89 244 318 243 318 0.90

Sequence Information

Coding Sequence
atgtgcccagaacttggcgatggacacGCGTCCGACGCTATCATCAAGTCCTCCGCTGAACAGGATGAAGTCCTAGCGATAAGCGAGAAGGTAGTCCTAAAAGCAGAAGACCTCCTCAGCTGGGTATCAGAAGGCGACGACTGGCGATGGGGTCTGATGGCGGTATGGCGCGGCGCGTGCGCTCCACCCAGCGAAGTGAACCACACGGAGCCTCTACACCATACGAAACTGGACTTTAGTGACGTCGACAAGGAGAAGAATGCTATTGCCATAGAACAAGACGCTCCAGGCGTGGTGGTGTTCTCGTACCCTCGATACTGCCGATACAGAGCGCTAGTCTCCCGGCTGGAAGGCACCCAGGGTTCGTGGCTGCGGGATTCGTTGGTGGCAGCCCTCGGGGGTTACGCTGCTCCCACCACTCGCACCAGGATCCTGTACTGTAAGGACACGTTCGACTACCCAGACTTGGAAGGCCACGAGTTTGTCTGCAACCATCTCGCGCCCAAACTGAAGGGCAGACCGCGCGGTCGTCGCCGCAGACCGCCGCGTTCCAGAACGCAATCTCCGGACTCACGGTCCAGTGATGGGCAAGACGGATCTGAGGAGAAAGCGaccCCACGTCGGATATCCCTAAGGAACGGTCCCGACAAGAGTTCGGACGACGAAGAGAAAGAGAGGAAAGACATAAAAGAATTCAAGGACGTCGCTCTGGTGGGACCGACGCCGGAGGATGAAGCGTTTTTGATGCAGCTTCATCAGTTCTACAAGGAGAGGAATGAGGAGTTCCTACCGCCTACGCTTAAACACTTGTCCCTCCGAGCGCTCTACAACCGCGTCTCAAAGCGCGGCGGGTATGACGCCGTCTGTCGCAACAAACTGTGGCGAGTTCTGTTCGCGGAACATCCTGGATCCCACACCAGGCGACATTACGAACGATATCTGCTACAATACGAGAACCACGTGAGGAACGGTAGAAGGAACGGTGTGACGGAACAACAGGAGATACCGACCATTGACGTCGCGGACTCCCCTGATGCGAGACATCATACGCCGAAGCGAGACATCGTTGACTGCGAGACTGGTGAAATCAAAGAAGAGATCAACATGATCTCAAAACCCGCCGAGGAATTGAACCGAGAGTTTCTCGATTCTTTACCGAAAGAGGAAAAACCCGCGAAAATTGCGCTCATTCCTGTCGAGAAATTGATCAAGAATTGGGGACAAGTTGAGAGGGAAGAGAAGAGTGGAGTGAGTCCGGAAGCGAGCTACCTGAAGGGGTCGTCTCCCCACAACGGCCACGTCACCACTCTACTGGACCAGAAACCTCGTCCGGCGGGTCGCAGCTCGTTACGTGCGGTGCGAGTGAAGCCAAACAGACCGAACGCCAACACCACGCCGTCATCGCTATCAACATCCAGCTCCAGCAGTTCGACCTGGTCCCGCTCGCCGCCCGCCGGCGCGGCGCCCAACTTCGGGATCCACCACCCGCCGCCGGTACAACCTGTGCACGATGATGACATACAGGAGGTACCATACAAACCAAAAACTCCAGAAATCATCGATTTAGACGAATACCCAGAAAGCCCTCAATCAGTCAAGAAGAAAAAGCTAGATATTCTCAAAGAGGGTGGCCTAGAAGTTACCCCATTACCCACCCCTAGTTGGCCCCCCGTCCTACCGACCCCTATAACCCCTATTCTGACCCCTAACCCCATGCTACTAAACCCAGTGGTCCAACATCAAATTATGTCCAACGCACAGCTTTTTCAAATGTACAATGTTGTACCGAATTTTCCAAATGGCGCTTTGCCCCCAAAAGTGATACAAGCGACCTCTATATTTGGGACTACAAGCCCAGAAAAGACCGTCTACGGGAACCCAAAGGACCCTTTCATGCCCCCTCCACACGTTATCCACGGGGTACCCCTAAAACCGCAGAAAAGTGTCCAAATTCCCCCCATCCCACCCCAAGATATCCTCGATTTGACTTGTAAATTAACTTCAAAAAGCACGGAAACTTCAAAACCAACGGTCGAAATCGTCCGAGTTCCCACATCCCCGTCCCCTTCAAAAACATCCCCCCAGAATTTGACTAAAAACTACTCTATAATAGACGGAAAAGCAGTCGTGGGTTCCAATTTAGAAATCACTTTGGTCAACAAAAACAACCCTAAAGTCCAAAACCAATCTCGTCCGACCCAAAAGAGATCTTCAAACGGGAAATTCATACCGAAAACCCCTGAGAAAGACAAGACGCCCCCCAGGAAAACCCCCATAATCATACCCAATTACCCCGTCCCAGAACCCAGTTCGACCCAGTTGCCTCAGGGGCCGAGTCAGAAGGAAACAAAGCCAAATATGGGGTTTTTGGACCCTTACATGGCTCTATACAACTTTGCGGGTCAAATGGACCCTCGACAGCTCGCAGCATATAGGGACCTTATGACAAATCAAATGAAAGGATATTCTAACCTCTTAAACATGGGTATGCATCCAACAACGAAAAATTAA
Protein Sequence
MCPELGDGHASDAIIKSSAEQDEVLAISEKVVLKAEDLLSWVSEGDDWRWGLMAVWRGACAPPSEVNHTEPLHHTKLDFSDVDKEKNAIAIEQDAPGVVVFSYPRYCRYRALVSRLEGTQGSWLRDSLVAALGGYAAPTTRTRILYCKDTFDYPDLEGHEFVCNHLAPKLKGRPRGRRRRPPRSRTQSPDSRSSDGQDGSEEKATPRRISLRNGPDKSSDDEEKERKDIKEFKDVALVGPTPEDEAFLMQLHQFYKERNEEFLPPTLKHLSLRALYNRVSKRGGYDAVCRNKLWRVLFAEHPGSHTRRHYERYLLQYENHVRNGRRNGVTEQQEIPTIDVADSPDARHHTPKRDIVDCETGEIKEEINMISKPAEELNREFLDSLPKEEKPAKIALIPVEKLIKNWGQVEREEKSGVSPEASYLKGSSPHNGHVTTLLDQKPRPAGRSSLRAVRVKPNRPNANTTPSSLSTSSSSSSTWSRSPPAGAAPNFGIHHPPPVQPVHDDDIQEVPYKPKTPEIIDLDEYPESPQSVKKKKLDILKEGGLEVTPLPTPSWPPVLPTPITPILTPNPMLLNPVVQHQIMSNAQLFQMYNVVPNFPNGALPPKVIQATSIFGTTSPEKTVYGNPKDPFMPPPHVIHGVPLKPQKSVQIPPIPPQDILDLTCKLTSKSTETSKPTVEIVRVPTSPSPSKTSPQNLTKNYSIIDGKAVVGSNLEITLVNKNNPKVQNQSRPTQKRSSNGKFIPKTPEKDKTPPRKTPIIIPNYPVPEPSSTQLPQGPSQKETKPNMGFLDPYMALYNFAGQMDPRQLAAYRDLMTNQMKGYSNLLNMGMHPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00834412;
90% Identity
-
80% Identity
-