Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949358125.1
Location
OX442343.1:10483744-10510641[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-24 5e-21 75.6 0.0 2 89 101 184 100 184 0.93
2 2 2.3 7.6e+03 -1.9 0.0 33 62 1276 1306 1270 1325 0.79

Sequence Information

Coding Sequence
atgggTAAATGTGATGAAGCTAATGTTGAAGTTAGTATGGGGGACTCAGCGTCCCCCATGAAACCTGATAATTTTACATTCACGCCTCCTCCGGAGGCTCCGGTGTTCGAGCCCACACCAGAGGAGTTCCTGGATCCTCTGGCGTACATCAGCAAGATACGTCCTATCGCCGAGAAGTCGGgcatttgcaaaataaaaccaCCAGCGCATTGGCAGCCACCTTTCGCTGTGGATGTGGACCGACTGCGGTTCACCCCTCGGATTCAGAGGCTAAACGAATTAGAGGCAATAACCCGCGTGAAGCTGAACTTCCTCGACCAGATCATCAAGTTCTGGGAGCTGCAGGGCTCCGTGCTTAAGATACCGACCGTCGAGAGGAAGCCTCTTGACTTATACGCGCTGCACAAGATCGTCAGGGAAGCTGGCGGCTTCGAAGTATGTTCGTCAGAGCGCAAATGGTCGAAGATAGCGCGGCGTATGGGCCACCCGCAGGGGAAAGGCATCGGCTCCATACTCAAGAACCACTACGAGAGGATCCTCTACCCGTATGACGTCTTCAAGAGTAATGGAGCTCAAGGTGACAATAAGGAAACTAAGATCGAGGTGAAGACGGAATGCACCCCCGAGAAGGCGACCCGCAGCCGTTCCTCGTCGAAGTGCAGCGCGACGGCCGGGGGCGCGGGCACGCGGCGGTTCCGCGACCCCGAGCCCGCCGCCGAGGGCAGCCACGCCGAGGGCGCGCTGCCGCCGCCGCACCAGGCGCCGCACACGCCGGTCAAGGAGGAGCCGGTAGTGCACGCCGAGACGAGACGTAGTCCCCGCGAGAACAAGTGGATGTCTGGAGGCGCGGCGGGGTGCGGTTCCCGCGGCCGCGCGCCGCGGTCGGCGCGGCTCCGCGAGCACCGCATGTCCAACATGACGGTCTCCGTCACACCGGCGCCTGCGCCGCCCTTACTGCCCAACCCCTTGGACCCGCTCGCCAAGTACATGTGCCGCGTGTGCACGCGAGGCGACGTGGAGGAGCAGATGCTGCTGTGTGACGGCTGCGACGACTCGTACCACACGTTCTGCCTGTTGCCGCCGCTCGCCATCGTGCCCAAGGGCGACTGGCGCTGTCCCGTCTGTCTCGCCGAGGAGGTGTCGAAGCCAGCAGAAGCGTTCGGGTTTGAGCAGGCCTCCCGCGAGTACACACTACAACAGTTTGGAGAAATGGCTGATCAATTCAAATCCGACTACTTCAACATGCCTGTACATATGGTGCCGACATCAACAGTGGAACGGGAATTCTGGCGCATCGTGTCCTCTCTAGACGAGGACGTGACCGTGGAGTACGGAGCTGACCTTCACTCCATGGACCACGGCAGTGGGTTCCCCACCAAAGTGTCCGCACATCTGTACCCCGGGGAGCAACAGTATGCAGACTCTAGCTGGAACCTGAACAACCTGCCCGTCTTGGAGGGATCTGTGCTTGGACACATTAATGCTGACATCTCTGGGATGAAGATCCCGTGGCTGTACGTAGGGATGTGCTTCGCGACATTCTGCTGGCACAACGAGGACCACTGGAGCTACTCCATCAACTATCTGCACTGGGGGGAAGCCAAGACCTGGTATGGAGTTCCGAGCTCAAAAGCGGAGCAGTTCGAGGCGGCAATGAAGGCGGAGGCTCCGGAGCTGTTCCAGCTGCAGCCGGACCTGCTGCATCAGCTGGTCACCATCATGAACCCCAACGTCTTGATGAAGGCTGGAGTACCCGTCTATAGATTGGACCAACACGCTGGTGAATTTGTGATAACATTCCCGCGCGCGTATCACGCGGGCTTCAACCAAGGATATAATTTCGCTGAAGCAGTCAACTTCACACCGGCCGATTGGTTGAAAATGGGTCGCGAATGCGTCTTACACTACTCGACTCTCCGGCGATACTGCGTGTTCTCTCACGACGAGCTGGTCTGCAAGATGGCGCTCGAGGCGGAGTCTCTCGGGCTGACGGTCGCACTCGCCGCCTACCGCGACATGCGGACCATGCTCCTTCACGAGAGGAAGGCGAGGAAGTCGCTGCTAGACTGGGGTGTAACGGAAGCGGAGCGCGAAGCGTTCGAGTTGCTACCGGATGACGAGCGTCAGTGCGCGGTGTGCAAGACGACGTGCTTCCTGTCGTGTGTGACGTGTGCGTGCACCAACAACGTGGCGTGTCTGCGGCACTACGGCCAGCTGTGTCACTGTCCGCCGCACGCGCATCGACTGAGATACCGCTACACGCTGGACGAGCTTCCGGCCATGTTGGACAAGTTGAAGCGCAAGTCGGATCTGTTCCGCGAGTGGGCCGAGGCCGTTCAGAACGCCCTTGACCCTGACACGCCCAAGTCTTGCGACCTGGATGGGCTGAAGTCATATCTCAGGAGGGTACAGGAACTTAAGATGCAGAAGACGGAGCTAGTCCGCGCGCTGGAGACGGCAGTAGAGGACGCGGAGAAGTGCCTGTGCGTGATCCAACAGCTGGACCTGCACAAGATGCGCACCCGCACGCGGCACCACGACCCCAAGTACCGGCTGACGGTGCGCGAGCTGACGCTCTTCGCGCAGGAGATCGACTCGCTGGCCTGCGTGCTGCCAGAGGGCAGCGCTGTCAAGGAGGTGCTGCGCCAGACGGCAGAGTTCGAAGGCCGAGCCAAACAGCTCCTCGACGAGGACCTGACACCGGACGACGTATCCCCCGCATACCTCCGGGAAGTGGAGGACACGGTGGAGCTCGGCTCTGGGCTCTGCATAGTCCTGCCGGAACTAGTGGCGCTAACGGCGCGCGCCGCGCAGTTGCGGTGGTTGGGGGAGGCGAGGCGCGCGAGGGACGCGCAGCCGCCCCCCGCGCTCCTCGCGAGGTTGCTGGCGCAGGCGGGGGACGTGCCGCCCTGCGCCGCCGTCGCCACCGAGCTGCAGATGTTGCACAAGCTCAGAGTTGAAATCGAGGAGTGGGAGAAGCGAGCGGCCGCCGTGCTGATAGACACCTCCCGACCGGCGAGCGAGCGAGAGGCCAACACTCAGTACAGCACGATCACTGAGCTAGAGGCGCTACTGACGGATGGAGACGACATCGACGCCACGCTGCCATCGTACCACGCGCTGCAGACTGCCGTCTCGCACGCAAAGGACTGGCTCGCTAAGGTGGAAGAGATGCAATCGAAGGAACTGTACCCATACGTGCACAGCGTAGAGGCTCTGTCCAAGAAGGGGGCTCACATACCGCTGCGACTGGTGGAGAAGGATCAACTGCAGAATGCTATCCAAGCAGCTGACGAGTGGAAGAAGGGGGCGGCTGAAATGTTCCTCAAGAAGAACTGGTCGGGCTCGCTGCTGGAGGCGCTGTCCCCTCGCGTGGAGTGGGACCCGCCGTCCCCCGCGAGGCGACGGGGGCCGGCGCCGCCCACCGACCTGCTCACCAAGTTCACTGAAGACTCCACTCCGACTGAGATCGTCGCTGCTTTCAAACATGCGGAGAAAACTGAACTCGATGCCGTCAGGGAGATCAGAAGTCGCAACATGCGCAAGGCATTAGGAACGACGAGCGCGCCTGCCACCTACTGCCTGTGCCAGAAGCGGCAGTTCGGGCAGATGACGCAGTGCGAGCTCTGCAAAGACTGGTTCCATTCTGGGTGCTTGGTGAACTACCGCCCGCCGTCGCCGGTGGGCGGGCGAGCGGAGCGCAGTCCGGGCGAGGAAGGCTCGCCCCCCGCTCCCGCCCCCGCTTCCGCCGGCAAGTTCCTGTGTCCGCTGTGCGTGAGGACCGAGCGCCCACGGCTGGACAAAATACTATCCCTACTGGTATGGCTACAGAAGCTGCCGGTACGCGTGGCGGAGGGCGAGGCCCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGACGCGGCGCGACACCATCTGCACTACAGCGTCGCTCTGCCGCACATCACGCAGGCAAATCGTGAGAAAGCGGATAAACTGAACGCAGAATTAAAGAAAGCAACCGGACGTGGACACGACTCTATGTCACAGAACCCGAGATCGTCGGCGGCCGTGGAGCACGCGTATAGCGCGTCAccgcggggcgggggcgggggtaGCGGGGGAGGGGGCGAGCCCGGCGCCGTGCCCCCACGCCTACCGCCGCAGGTGCTGCAGAAACTTGAGGACCTCATGCTGGAGGGAGACTTGCTAGAGGTACGTACTCTACTCTCGCGGAGACTCCTTACAGAATAG
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTPPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVREAGGFEVCSSERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAQGDNKETKIEVKTECTPEKATRSRSSSKCSATAGGAGTRRFRDPEPAAEGSHAEGALPPPHQAPHTPVKEEPVVHAETRRSPRENKWMSGGAAGCGSRGRAPRSARLREHRMSNMTVSVTPAPAPPLLPNPLDPLAKYMCRVCTRGDVEEQMLLCDGCDDSYHTFCLLPPLAIVPKGDWRCPVCLAEEVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRIVSSLDEDVTVEYGADLHSMDHGSGFPTKVSAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRLDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVLHYSTLRRYCVFSHDELVCKMALEAESLGLTVALAAYRDMRTMLLHERKARKSLLDWGVTEAEREAFELLPDDERQCAVCKTTCFLSCVTCACTNNVACLRHYGQLCHCPPHAHRLRYRYTLDELPAMLDKLKRKSDLFREWAEAVQNALDPDTPKSCDLDGLKSYLRRVQELKMQKTELVRALETAVEDAEKCLCVIQQLDLHKMRTRTRHHDPKYRLTVRELTLFAQEIDSLACVLPEGSAVKEVLRQTAEFEGRAKQLLDEDLTPDDVSPAYLREVEDTVELGSGLCIVLPELVALTARAAQLRWLGEARRARDAQPPPALLARLLAQAGDVPPCAAVATELQMLHKLRVEIEEWEKRAAAVLIDTSRPASEREANTQYSTITELEALLTDGDDIDATLPSYHALQTAVSHAKDWLAKVEEMQSKELYPYVHSVEALSKKGAHIPLRLVEKDQLQNAIQAADEWKKGAAEMFLKKNWSGSLLEALSPRVEWDPPSPARRRGPAPPTDLLTKFTEDSTPTEIVAAFKHAEKTELDAVREIRSRNMRKALGTTSAPATYCLCQKRQFGQMTQCELCKDWFHSGCLVNYRPPSPVGGRAERSPGEEGSPPAPAPASAGKFLCPLCVRTERPRLDKILSLLVWLQKLPVRVAEGEALQCVTERAMAWQDAARHHLHYSVALPHITQANREKADKLNAELKKATGRGHDSMSQNPRSSAAVEHAYSASPRGGGGGSGGGGEPGAVPPRLPPQVLQKLEDLMLEGDLLEVRTLLSRRLLTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00837249; iTF_00834407;
90% Identity
-
80% Identity
-