Idim024494.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- tfap2e
- Assembly
- GCA_949358125.1
- Location
- OX442342.1:5040870-5070437[+]
Transcription Factor Domain
- TF Family
- AP-2
- Domain
- TF_AP-2 domain
- PFAM
- PF03299
- TF Group
- Basic Domians group
- Description
- Activator protein-2 (AP-2) transcription factors constitute a family of closely related and evolutionarily conserved proteins that bind to the DNA consensus sequence GCCNNNGGC and stimulate target gene transcription [PMID: 2010091, PMID: 1998122]. Four different isoforms of AP-2 have been identified in mammals, termed AP-2 alpha, beta, gamma and delta. Each family member shares a common structure, possessing a proline/glutamine-rich domain in the N-terminal region, which is responsible for transcriptional activation [PMID: 2010091], and a helix-span-helix domain in the C-terminal region, which mediates dimerisation and site-specific DNA binding [PMID: 199812]. http://www.ebi.ac.uk/interpro/entry/IPR013854
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1e-24 1.8e-19 71.1 0.1 1 45 195 239 195 240 0.99 2 3 9.7e-18 2.9e-13 50.9 0.1 10 45 254 289 251 291 0.95 3 3 1.2e-73 3.7e-69 233.3 0.0 10 196 304 487 301 488 0.97
Sequence Information
- Coding Sequence
- ATGGTCTGCTCTTGTTTTCTTCATCATCTTAAACCAACTTATATTTGTCTCCAGGAGCGCCTAGGCGGTGGCGGGCTAGGGCTGGGAGGCGGCGGGTTCCGAGGCGGCGGACAGCCTTCCCTCGCTGACTTCCAACCGCCCTACTTCCCGCCGCCATTCGCGCCTGCTCCTCATCCAGCCAGTCCACACCACCAACAGCAGAGCCATGGCATGGACTACGGGGGAGGTGGTGGGGAATACAGCCAGCACTACGCTCCGCAGCAGTTACTACCGCGGCATCACCACCACGAGCCGCATGGCCATCTGCGACACCCGAGGGACCACCATGACGCGATACATGCACACCATTTATCGCATGGTGGTTTCGGATACGGAAGCGGGGGCGGCGGCGGGGAGAGGAGAGCGGACTACGGTGCGAGGGAGCAACATGAACTCGCCCTACACCACGCGCTGCATACGGAGGAAACTCCTaatGCAGCGATGGATGATACGACCGGGTTTATGACGGATCTACCTCTTTTAAAAACAATGAAAGGACGAGACGGGCTTGGCGGCGCGGGCTCATGTGCTCCGAACGACGTGTTCTGTTCAGTACCGGGCCGTCTGTCCCTTCTGTCGTCGACTAGCAAGTACAAAGTGACGGTGGCTGAGGTTCAGAGAAGATTGTCGCCTCCGGAGTGTTTGAATGCTTCTCTACTGGGCGGGGTTTTGAGGAGGttagttgatttttttattcaggACGGGCTAAGTTGCTCTGGTCTACTGTCGTCGACTAGCAAGTACAAAGTGACGGTGACTGAGGTTCAGAGAAGATTGTCACCTCCGGAGTGTTTGAATGCTTCTCTACTGGGCGGGGTTTTGAGGAGGTTAGTTGAATTTTTGATTCAGGACGGGCTAAGTTGCTCTGGTCTACTGTCGTCGACTAGCAAGAACAAAGTGACGGTGGCTGAGGTTCAGAGAAGATTGTCACCTCCGGAGTGTTTGAATGCTTCTCTACTGGGCGGGGTTTTGAGGAGagCGAAAAGCAAAAATGGCGGCAGGTTACTCAGGGAGAAATTAGAGAAGATAGGTTTGAATTTACCCGCGGGTAGAAGAAAAGCTGCTAACGTCACTTTACTTACATCTTTAGTTGAAGcgGAAGCAGTACATTTAGCTCGTGACTTCGGCTACGTGTGTGAGACGGAGTTCCCCGCGCGCGCGCTGGCAGAGTACCTCGCGAGGCAGTACGCGGAGCACGACGCGAGGAGACGACGTGACTTGTTGCAGGCTACCAAACAGGTAACAAAAGAGCTGATGGACCTGCTGAACCAAGACCGGTCCCCGCTGTGCAACACGCGGCCCCCGCACCTGCTGGAGCCCGCCATCCAGCGACATCTGACGCACTTCTCGCTCATTTCGCACGGGTTCGGTGGGCCGGCGATCGTGGCTGCACTCACGGCTATACAGAATTTCCTTAACGAATCACTGAAGCATTTAGACAAGTTATATCCCCAAAGCGGCATGGTGTCGTCGACAATGGATAAAACAAAAATGGATCCCGACATCAAGAAGtaa
- Protein Sequence
- MVCSCFLHHLKPTYICLQERLGGGGLGLGGGGFRGGGQPSLADFQPPYFPPPFAPAPHPASPHHQQQSHGMDYGGGGGEYSQHYAPQQLLPRHHHHEPHGHLRHPRDHHDAIHAHHLSHGGFGYGSGGGGGERRADYGAREQHELALHHALHTEETPNAAMDDTTGFMTDLPLLKTMKGRDGLGGAGSCAPNDVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRLVDFFIQDGLSCSGLLSSTSKYKVTVTEVQRRLSPPECLNASLLGGVLRRLVEFLIQDGLSCSGLLSSTSKNKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAANVTLLTSLVEAEAVHLARDFGYVCETEFPARALAEYLARQYAEHDARRRRDLLQATKQVTKELMDLLNQDRSPLCNTRPPHLLEPAIQRHLTHFSLISHGFGGPAIVAALTAIQNFLNESLKHLDKLYPQSGMVSSTMDKTKMDPDIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -