Ibis000818.1
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- pnr
- Assembly
- GCA_958496205.1
- Location
- CAUEGO010000211.1:193-3532[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-19 1e-14 54.5 4.1 1 35 70 103 70 104 0.97 2 2 3.1e-19 4.6e-15 55.6 6.0 1 34 124 156 124 158 0.98
Sequence Information
- Coding Sequence
- ATGGATATGTTACCGATGCAGAAATGGTTGCAGAACATCGCCCTGCTAGCCGGCGCCGGAGGCGGCGGTGTAGGCGGCGTGGGCTCGATGGCGGGCGGGTTGTACCCCCAGAACGTGGTGATGGGCTCGTGGTGCGCGCCTTACGACGCTCTGCAGCGACCTCCGGCATACGATGGTGTGCTCGAAGCGTACGAGGAGGGTCGCGAGTGCGTCAACTGCGGCGCCAACAACACCCCGCTGTGGCGGCGCGACTCCACCGGGCACTATCTGTGCAACGCGTGCGGACTCTACCACAAGATCAACGGCGTCAACCGGCCGCTGGTGAAGCCGAGCAAACGGCTGTCAGCGGCGAGGCGACACGGGCAGTGTTGCACGAACTGCGGGTCGCGCAACACGACGCTGTGGCGACGCAACAACGACGGCGAGCCGGTCTGCAACGCCTGTGGACTATACTACAAGCTGCATGGCATTAACAGGTACAACTACAACTCATTACACAATTCTACTTCTTCTAGCTATTTTTCCACTCTGTGA
- Protein Sequence
- MDMLPMQKWLQNIALLAGAGGGGVGGVGSMAGGLYPQNVVMGSWCAPYDALQRPPAYDGVLEAYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRYNYNSLHNSTSSSYFSTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078730;
- 90% Identity
- -
- 80% Identity
- -