Ibis018138.1
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- ZNF526
- Assembly
- GCA_958496205.1
- Location
- OY292401.1:12522026-12537221[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.19 14 7.1 0.2 2 23 233 251 232 251 0.92 2 11 1.4 1e+02 4.4 1.8 3 23 273 290 263 290 0.82 3 11 0.64 47 5.4 2.8 2 21 308 324 308 326 0.71 4 11 0.0011 0.081 14.1 0.3 3 23 347 367 345 367 0.96 5 11 0.16 12 7.3 0.7 2 23 373 392 373 392 0.93 6 11 0.42 31 6.0 2.1 1 23 399 421 399 421 0.91 7 11 1e-05 0.00074 20.5 0.5 1 23 427 450 427 450 0.97 8 11 0.0006 0.044 14.9 0.3 1 23 455 478 455 478 0.95 9 11 2.4e-05 0.0018 19.4 0.7 1 23 484 507 484 507 0.90 10 11 3.3e-05 0.0024 18.9 3.8 3 23 515 536 513 536 0.93 11 11 0.0014 0.11 13.8 5.4 1 23 542 565 542 565 0.96
Sequence Information
- Coding Sequence
- ATGAGTGCAAAACGGTGCAGAATTTGCTTATGTCTCAAACCTAGACGAGACATAACAGAGCTGGAATTCACCGAGGGTTCTACAAAGCATTCTTATACAGAAATCATTTTGTTTTGCTTGGATGTTAAGGTGGATGAAGACTCAACATTGGGCACAAAACTTTGTGTGAAATGTCACAGAAAAATCTTAGacttttatgattttaaaataatggcCAGAACCAACAACACCATCAAAAATGACATAAACGAACACACTCCGGATTCCGAAACATTTTTAAGTGAAGATATGATAAAACAAGAGATGCAAACTGATGAATCTGACAAAAAAGATAGCCATTACCATACCGATGTTAAAATTGAAgTGACAAACGAAGAGTGGGACAATAATGATCAGAATGAAGGTTTAATTGATGATGTCCAAGATGAAGGTTTAACTGAAGATATCCAAAATGAAGGTTTACTTGTTGAAgtccaaaataaaattttacctGATGATGATTCAACTGATGAAGACAGTGATAATAAGGAAAAGTCTATCTATGAGATGAGTCTTGCAGaaagattaaaaaaaccaaaaaatataaaGGTAGAAAAAGATGATAAAtcagaaaataaaagtaatgGTTTACTAAACCCAAAACCGATGGTAATGATACCAAAACAACCTAAGAGAAAGAGAAAAGCTTACATGAAGCCGTGTCCTGAATGCAAAAAACCAGTTGAAAATCTAAAACGACACTTAGTAACGCATCTGCCACCAGAGCAAAAGGCTATAGAATTATCAAAATGCAACAAAATGAGACGCAGCGGATTTTGTAAAGAGTGTGGGGTTGTAGTGAGCAATTTTAAGGAGCATATGAGTAAGCATTTGCCCGATAATATTTGGCAGAAGACGATGAAAGGGCAAGGACTCGCTGGAACTTGTAAGatatgcgGTAAAACTGTAAAGCGTCTAAAGAAACACATGGTGATACATTTACCACAGTTCCAAAAGGAGGTGAAGGAAGCAGAGAAAAAGTTCAAAGGCCCAGTTAACTGTCTCATATGCAATAGAGAATTTATATCACAACAGTATCTAGATCTACATATGAAATTACATTTAAAGCCCAAAAGACAATGCCCTTTCTGTGATAAGAAGGTATCAAAGCTGAGGTCGCACATCCGCGTGATGCACTCGCCCGAGCAGCTGCGCTTCGAGTGCGACTACTGCGGCTCGCGGCATCTTACTCGCTACATGCTACGCCAGCACCTCGCCACGCACACCGGCGATAAGCCCTTCCAGTGCGCGGACTGCGGGAAGCGGTTCATTGCGAAGGGCACCCTTATCACACACCAACGGCAAAAGCATCAGGGATTGGGGTATCTCTGTCAATATTGTTCTAAATCTTTGTCCAGTATAGCATCTTTGAGAGTACATGTCAGATCTGTGCACACAAAAGAGAAGCCTTTCGCTTGTCCTGACTGTGGCAAATGTTTCTCAACAAAGCAAGGTGTCCAGTCTCACGTCGCTGGCTTCCACACACAAGTCAAGAACCACCTGTGTCCCTACTGCcctaagaaatataaaacatcAGAACAATTGACGCGTCACCACAAAGAAGTCCACCTCCAGATAAAGAATTTCAAGTGTCAGTTCTGCGAGTCGCGCTTCTACCGGAACTCGCATCTGCGGCGGCATGAGTACACCATACATCTACGATATGCTAACGACAAAACTGATAACTAA
- Protein Sequence
- MSAKRCRICLCLKPRRDITELEFTEGSTKHSYTEIILFCLDVKVDEDSTLGTKLCVKCHRKILDFYDFKIMARTNNTIKNDINEHTPDSETFLSEDMIKQEMQTDESDKKDSHYHTDVKIEVTNEEWDNNDQNEGLIDDVQDEGLTEDIQNEGLLVEVQNKILPDDDSTDEDSDNKEKSIYEMSLAERLKKPKNIKVEKDDKSENKSNGLLNPKPMVMIPKQPKRKRKAYMKPCPECKKPVENLKRHLVTHLPPEQKAIELSKCNKMRRSGFCKECGVVVSNFKEHMSKHLPDNIWQKTMKGQGLAGTCKICGKTVKRLKKHMVIHLPQFQKEVKEAEKKFKGPVNCLICNREFISQQYLDLHMKLHLKPKRQCPFCDKKVSKLRSHIRVMHSPEQLRFECDYCGSRHLTRYMLRQHLATHTGDKPFQCADCGKRFIAKGTLITHQRQKHQGLGYLCQYCSKSLSSIASLRVHVRSVHTKEKPFACPDCGKCFSTKQGVQSHVAGFHTQVKNHLCPYCPKKYKTSEQLTRHHKEVHLQIKNFKCQFCESRFYRNSHLRRHEYTIHLRYANDKTDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -