Ibis007758.1
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- ZFY_3
- Assembly
- GCA_958496205.1
- Location
- OY292395.1:37862140-37866421[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 4 2.9e+02 2.9 7.3 1 20 292 311 292 314 0.93 2 14 0.05 3.7 8.9 0.6 2 23 319 340 318 340 0.96 3 14 0.00036 0.027 15.6 1.6 2 23 345 366 344 366 0.97 4 14 0.0045 0.33 12.2 4.1 1 23 370 392 370 392 0.98 5 14 0.0012 0.091 14.0 3.9 1 23 398 420 398 420 0.98 6 14 0.0015 0.11 13.7 3.3 1 23 426 449 426 449 0.98 7 14 0.041 3 9.2 4.0 3 23 460 481 458 481 0.95 8 14 0.0011 0.083 14.1 1.1 2 23 495 516 494 516 0.95 9 14 0.00046 0.034 15.3 4.6 1 23 522 545 522 545 0.98 10 14 0.35 26 6.3 0.5 2 21 551 570 550 571 0.92 11 14 0.014 1 10.6 0.3 1 23 576 598 576 598 0.95 12 14 0.019 1.4 10.3 1.3 1 23 604 626 604 626 0.97 13 14 0.00055 0.04 15.1 0.9 1 23 632 654 632 654 0.97 14 14 0.00018 0.013 16.6 1.8 1 23 660 683 660 683 0.96
Sequence Information
- Coding Sequence
- ATGCCTCGGCCGGTTTCCCCAAGGATCTGCCGAGTGTGTCTCACCAGTGACATGGAACTCCACCGTGTATCCTCGCCAGCTTCGTCTACATTTTACGAATTACTCACTCACGTTAAGTTGAACAATGGGGGGCCAGAAGCCCTGTGCAGCTACTGTGTTGCAATATTGCAAAAGTGCTGCAGATTTGCTGAGACAGCTCGTCAAGCTAACACCGTGCTGGAGCAGTGGCACAATGGAAACACTACTtgGGTCCCAGAGAAGCTGCTACATTCATACACTAAAACTGCTGTGGAGATACAAatgtacatacatgttactaacTTACCTACGGACTCTCAAGATGTTAAAAGTGAAGCTTCAGGTGCTTGTGTAGATTACGCCGAAGACAATATTAGTACATATTTAGAAGACATAGAAACAGACAGAAAATCCGaagatatatttaaaaaaacactaagTTTCGATCAAGTAGAACCATTTAATGATCTCAAAATAGAACTTGATGATGCTAATTGTCGAATTGAAGCTAAtagtcaaattaaaaaaactactagtcAGATGGAAGACACTAATAGTCAGATGAAAGACACTAATAGTCAGATGGAAGACACTAACAGTCAAATTGAAGACACTAATAGTCAAATGGAAGACAATAATAGTCATATGGAAGACAGTAATAGTCATATGGAAGACACTTATAGTCAAATTGAAGAGACTAATAGTCAAATTGAAGACACCAATAATAtgaaaaaacataagaaaagtCATATAGGTGATAAAGATTTTGACTGCGAATTATGTGGGTTTAAATCTGGGACAAAACTTGGTGTAGTacaacataaaattaatattcatgGCAGTTTAAATAAGTTGTATCATTGCTTCATGTGTGAATTTAAATGTATTAGTAAACACCAATTAAAAAACCATGTATGGAAGCATGAAGACGAGAAAACCTGCATGGAATGTTCAACAGAATTCCAAGACatatatcttttgaatgaacaTTTAAAACAACACAGCGAGGAAATATCTTGCGATaactgtgattataaatgttctAATAAAATCCAACTGTTAAACCATATAAAAATCCACTCGAAAAAGTTCAGTTGTGATGATTGTAATAAACAATTCTTAAAACTCAATCATTTAAAATCACATCTGAAAAGTCATACGGGCGAAAAATCACATGTATGTCATTTGTGTGACTACAGAACTGATTTCGCTAATAATCTGAAACGGCATCTCCTTACACATACCAGTAATAAACCTTTCAGCTGCCCCGAATGCAAAACGAAACATAAAAGCGAAACTAACTTAAAAAATCATATGAAAACTGTTCATAATAAAAGTTACAAACGTAAAACTCATTTGTGTAAAAAATGCAGTTTCAAATGTGAGAAAAGAATTCAATTACAAGCTCATATGAAATCCAAACATACATTGAAACCTTTCCGAAAGAAACCAGGACAAAAATGCATTTGTAACTATTGCGATTTTACAGCTGCGAAGAAAAGCGAGTTAGAGCGACATATCTTCATACATACCGGGCATAAACCGTACACATGTCCAGAATGCAAACAAGCTTTTAAATGCAAATACTATTtgaaaaaacatataaaaataaagcacGTCTACGATAGAAAAACTTGTACAAGATGCAATAAGCACTTGCAAAATGAAACTGAATTACAAATCCATGCAAATGTGTGCCTAAAGAAGTTTCTATGCGACATTTGTGGATCAAAATGGAAGAATAGCCTGTTATTGAAGAGGCATATGATGATTCATACTGGGGAGAAGCCTTTTGCGTGTGAATTATGCCTCTACAGGTGCTCTTTAGAAAGCAGTATGGTGAAGCATATGCGAGTGCATACAAATGAAAAGCCGTATGCATGTGATAAATGCAGTTACAGATGCGCTGTAAGCAGCAACTTGGTGAGGCATCTTGCTTCACATAGCAATGAAAAACCGTTCGCCTGTCATATTTGCGAcgcgaaatataaaattaagaggGATTTGAAGAGGCATATTAATAGGTTACATGGATGCTCGGATGTAGTTGGATGTTGA
- Protein Sequence
- MPRPVSPRICRVCLTSDMELHRVSSPASSTFYELLTHVKLNNGGPEALCSYCVAILQKCCRFAETARQANTVLEQWHNGNTTWVPEKLLHSYTKTAVEIQMYIHVTNLPTDSQDVKSEASGACVDYAEDNISTYLEDIETDRKSEDIFKKTLSFDQVEPFNDLKIELDDANCRIEANSQIKKTTSQMEDTNSQMKDTNSQMEDTNSQIEDTNSQMEDNNSHMEDSNSHMEDTYSQIEETNSQIEDTNNMKKHKKSHIGDKDFDCELCGFKSGTKLGVVQHKINIHGSLNKLYHCFMCEFKCISKHQLKNHVWKHEDEKTCMECSTEFQDIYLLNEHLKQHSEEISCDNCDYKCSNKIQLLNHIKIHSKKFSCDDCNKQFLKLNHLKSHLKSHTGEKSHVCHLCDYRTDFANNLKRHLLTHTSNKPFSCPECKTKHKSETNLKNHMKTVHNKSYKRKTHLCKKCSFKCEKRIQLQAHMKSKHTLKPFRKKPGQKCICNYCDFTAAKKSELERHIFIHTGHKPYTCPECKQAFKCKYYLKKHIKIKHVYDRKTCTRCNKHLQNETELQIHANVCLKKFLCDICGSKWKNSLLLKRHMMIHTGEKPFACELCLYRCSLESSMVKHMRVHTNEKPYACDKCSYRCAVSSNLVRHLASHSNEKPFACHICDAKYKIKRDLKRHINRLHGCSDVVGC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -