Basic Information

Insect: Idaea biselata
Gene Symbol: -
Assembly: GCA_958496205.1
Location: OY292401.1:28435693-28443350[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00069 0.051 14.8 0.5 1 23 304 327 304 327 0.95

2 11 0.032 2.4 9.5 3.5 1 19 337 355 337 359 0.92

3 11 1.9e-05 0.0014 19.7 1.9 2 23 365 386 364 386 0.96

4 11 0.00091 0.067 14.4 0.8 1 23 390 413 390 413 0.94

5 11 0.16 12 7.3 1.2 1 23 416 440 416 440 0.96

6 11 7.4e-05 0.0055 17.8 1.2 2 23 508 529 507 529 0.95

7 11 0.91 67 4.9 1.9 2 23 549 571 548 571 0.92

8 11 5.1e-07 3.8e-05 24.6 3.2 1 23 577 599 577 599 0.98

9 11 0.0014 0.1 13.8 3.7 1 23 604 626 604 626 0.98

10 11 0.0051 0.38 12.0 5.8 2 23 633 655 632 656 0.95

11 11 0.017 1.2 10.4 2.1 3 19 695 711 694 716 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00069	0.051	14.8	0.5	1	23	304	327	304	327	0.95
2	11	0.032	2.4	9.5	3.5	1	19	337	355	337	359	0.92
3	11	1.9e-05	0.0014	19.7	1.9	2	23	365	386	364	386	0.96
4	11	0.00091	0.067	14.4	0.8	1	23	390	413	390	413	0.94
5	11	0.16	12	7.3	1.2	1	23	416	440	416	440	0.96
6	11	7.4e-05	0.0055	17.8	1.2	2	23	508	529	507	529	0.95
7	11	0.91	67	4.9	1.9	2	23	549	571	548	571	0.92
8	11	5.1e-07	3.8e-05	24.6	3.2	1	23	577	599	577	599	0.98
9	11	0.0014	0.1	13.8	3.7	1	23	604	626	604	626	0.98
10	11	0.0051	0.38	12.0	5.8	2	23	633	655	632	656	0.95
11	11	0.017	1.2	10.4	2.1	3	19	695	711	694	716	0.94

Sequence Information

Coding Sequence: ATGGAAGGGGATGACGTTACTCCTGAGTTCGGGATGGTCTATCCTATCATATTCATGCCCAAGAAGTGCACCAACTTGGAAACGAGCGCCAATATCACTGATAACGTATACATAAACATGAACATGATAACTACAGATGCTGAAGGTAACGATATGTGCATATACTCAGGATTCTGTTGCATCAAAATGGTAGATTCTTGTGAGGTCAACATTCCCACTGAACCTACCCCGGAGACTAGCTTGTCACTTGAAGATGACATAGAACGAATGCCAATAGTCTTATCAGAGGCAAACCAACTTTCCTTTCCCACTTACAATCAATCCGGAGTGTGGATTGACCCTTCTAGAAGTCCTTACGTTTATAACGATTACGATGTAAGTGCCCAAGAGCATTACTCTATCCACGAGACTCAAGGCTGCATCACAGTCGAGCAACACAACACAATAATAACTCAAAACGTCTACAATTATAAAGAGACCAACATTTGTAACATACAAGAGGTAAATACGAAGGATTTTGGGCAAGTCGGCCATAAAAAATACAGGAAAATAACTGAAGCAACAGTAGGGCAGTCAGATCCTAACGTAAGTTATTATGAAGATGACGAGTTTGAGTGTGGAGTATTCCTTTCGAATTTACCTGAAGAAATCATCAACGAGAAGAACTCTAAAGATAGAAAAACAGCAGCTAAAATTGAGGATAAGAGTGCACTTAGACAGCTAATGTCACCAGATATTGAACCTATTTCCAAGCAGAGAAAGACTATTTTATATTTGGGTGAAGATTCATACTCGGGGCAAACAATACAGAATATCTCATACAATGATCCGATGGTTACTTGTGTGGGGGTCGATCAAGTGGCTCAAGAAGTTGTTATCGATTCAAGTGGAGACCCTAAAAAGAAGCGTTACCAATGCGACAAGTGCAAGCAAATATTTATAGACATAGCGTCGTTCAGACAACACATGAGTGGATCCCACGCGCCTCCGCCTCCCAACGATAACCTCTATAAGTGCACCGACTGTTCCCGACAGTTCAAGACTGCTATCAAGTTCGAAACACATTGTCTAGGCCACGGCGACCCGGAGCTGGAGTGCACGATCTGCAACAAGGTGTTCGCGTCCAAGTTCACTCTCCGCGCGCACCACAAGCTGCACGACAGGAAGCATCGCTGCCAGCTCTGTGCCAAGTCCTTCGTCAGCGAGAGCGGGCTCAGGCAACATGCAGCGCGATCCCATTCGATGTTCATGTGTGACTTCAGTAAGTGTCCGTTCGTTGCCCGAGTCTACTCGGACCTGTGTGACCATCAGAAGGTGCATCGGGAACTCAGTGACGATGAACTCGACTATAGTTTACAGCAGGTAGAGGTAAAGCAAGATGAGCCGCAGCCGGACCCGAACCCCCCACCCTCCACCGAAGGCGACCGCATCCGGGAGGCAGACATAGTCATAGCCAAAGTTATGGCCAACAAGGTCTTCCTTTTGAACGCTAAGAAGGCCAACAAGCAAAGATGTCATAAGAGTTGCGAAGTCTGCCACAAAACTTTCGACCGTATCGGCGATTTAAAACGTCACCTTATCGAACATGTCATCAAAAGCACGATGGCAAAGACCCCCATCAACCAACATGGCACCTTAAACATACAATGCGAAATATGCCACTCCAACTTCTTTAACAAACTAGACAAATACAAAGCCCACCTACGGGAACATGCAAAGCTAACTATATACAAATGCACTCTATGTGATAAGTCCTTCAGTGATTCCAGTAACTTctcaaaacacaaaaaaatccaCGGTCTCTCATTTTTCCAATGCGATTTGTGCCATAGGAAATTCAATTCGAAAAAAACTATAGCCCAACACATGGAGTATCACCGAAAAAATAAGCCAATGAAATGCAGGTACTGCTCAAGGATTTTTCACTTCCAATCGATGTTgaaaaagcatattaaaaaCGCACACCACGAAACTCCATTGTCGAAATTCCGCTGCGCTTTTTGCGATGACATTTTCAAGTCTTTGAGAGAGAAATGGGATCATGAATGGGAAATACACAACGTTAGGAAATTGGTTGTTGATTGTTTAATCTGTGGTAATAAGTTTAGGAAGTATTCGCAGTTGAAAAGGCATTgcattgatgaacataatttggAGATACCATCGGCTAGGAAATTGCTAATGAAGAGATATGATGTATAA
Protein Sequence: MEGDDVTPEFGMVYPIIFMPKKCTNLETSANITDNVYINMNMITTDAEGNDMCIYSGFCCIKMVDSCEVNIPTEPTPETSLSLEDDIERMPIVLSEANQLSFPTYNQSGVWIDPSRSPYVYNDYDVSAQEHYSIHETQGCITVEQHNTIITQNVYNYKETNICNIQEVNTKDFGQVGHKKYRKITEATVGQSDPNVSYYEDDEFECGVFLSNLPEEIINEKNSKDRKTAAKIEDKSALRQLMSPDIEPISKQRKTILYLGEDSYSGQTIQNISYNDPMVTCVGVDQVAQEVVIDSSGDPKKKRYQCDKCKQIFIDIASFRQHMSGSHAPPPPNDNLYKCTDCSRQFKTAIKFETHCLGHGDPELECTICNKVFASKFTLRAHHKLHDRKHRCQLCAKSFVSESGLRQHAARSHSMFMCDFSKCPFVARVYSDLCDHQKVHRELSDDELDYSLQQVEVKQDEPQPDPNPPPSTEGDRIREADIVIAKVMANKVFLLNAKKANKQRCHKSCEVCHKTFDRIGDLKRHLIEHVIKSTMAKTPINQHGTLNIQCEICHSNFFNKLDKYKAHLREHAKLTIYKCTLCDKSFSDSSNFSKHKKIHGLSFFQCDLCHRKFNSKKTIAQHMEYHRKNKPMKCRYCSRIFHFQSMLKKHIKNAHHETPLSKFRCAFCDDIFKSLREKWDHEWEIHNVRKLVVDCLICGNKFRKYSQLKRHCIDEHNLEIPSARKLLMKRYDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00836931;
90% Identity: iTF_00836931;
80% Identity: -