Basic Information

Insect: Idaea biselata
Gene Symbol: -
Assembly: GCA_958496205.1
Location: OY292394.1:37278095-37302309[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.46 34 5.9 3.7 1 23 266 288 266 288 0.98

2 12 0.033 2.5 9.5 2.7 3 23 297 318 295 318 0.93

3 12 0.93 68 4.9 2.1 1 23 322 344 322 344 0.97

4 12 1.5e-05 0.0011 20.0 6.7 1 23 349 372 349 372 0.99

5 12 0.00027 0.02 16.0 0.5 1 23 376 399 376 399 0.97

6 12 0.44 32 5.9 0.2 3 20 421 438 419 440 0.89

7 12 1.1e-05 0.0008 20.4 0.4 3 23 454 475 452 475 0.95

8 12 0.0016 0.11 13.6 1.7 1 23 495 518 495 518 0.98

9 12 0.0087 0.64 11.3 7.7 3 23 536 556 529 556 0.95

10 12 0.0026 0.19 12.9 1.0 1 23 562 584 562 584 0.96

11 12 5.8e-08 4.3e-06 27.6 0.7 3 23 591 611 590 611 0.97

12 12 0.00069 0.051 14.8 0.2 1 23 617 640 617 640 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.46	34	5.9	3.7	1	23	266	288	266	288	0.98
2	12	0.033	2.5	9.5	2.7	3	23	297	318	295	318	0.93
3	12	0.93	68	4.9	2.1	1	23	322	344	322	344	0.97
4	12	1.5e-05	0.0011	20.0	6.7	1	23	349	372	349	372	0.99
5	12	0.00027	0.02	16.0	0.5	1	23	376	399	376	399	0.97
6	12	0.44	32	5.9	0.2	3	20	421	438	419	440	0.89
7	12	1.1e-05	0.0008	20.4	0.4	3	23	454	475	452	475	0.95
8	12	0.0016	0.11	13.6	1.7	1	23	495	518	495	518	0.98
9	12	0.0087	0.64	11.3	7.7	3	23	536	556	529	556	0.95
10	12	0.0026	0.19	12.9	1.0	1	23	562	584	562	584	0.96
11	12	5.8e-08	4.3e-06	27.6	0.7	3	23	591	611	590	611	0.97
12	12	0.00069	0.051	14.8	0.2	1	23	617	640	617	640	0.96

Sequence Information

Coding Sequence: ATGATTTTCTACGTGTTACAAAAACCAGTTTGCAGTCCGAACCTCAAAATTGCGTTTCATTTAGAAAACAATAAccaaatGCGGAGTCAGGTGCTCCGGTGCAACTTACTTGGTGTAGAGGTGTCGTCGGCTTTGAAGGTCGGTGGGGGATGcacgcgcggcgcgggcgtaacaggcggcggcggcgggcgatGGCGACTGACTGCTAGCCCGGGCGAGAGCCCCGCCGCCCGCGCGACCCCAACCCCCGCGCCCTATCGGATAAACAACGTGCATTGTGGACCCGATCTGCCCTACTCCATGCGACACACATGCGACATCTACGTGCTAAGCAATACCCAACGCTGCGTTACTGGAGAAAAATCTGTAGTCTCTTCTCAACTTTGTGGACGGGACCAGCGATGTGATGATATACTAGATGAAGTGAAAGAAGAGGCTGGATTAGATGACATTGAGAGTAATGGAATAATAAATGATAGTGAAATTAACACAAATGATATTGATTCAATAAATGATAATGATATAACCAGTGATAATTCAGAAGATGATAAATTTATAAGTCAACTTTTAcatgaaattaaaaagaaatcatctaaaattaagaaaaaaatcaagaaaaatgaTGAATTCGATAAAAGTCATGAAACTCCATTAAAAAGAAAGAGACAAAAACAACCATTGAAGAATAAACAGGAATACGAATCTATATTCGATATAGTATACTTTAAAAACGATGACGAAGCGAAGGCAGAGTTCGCTGTCAGACAAAACTCAGATTATTACAAGAATGCAGCTTTTAAATGTACTGTGTGTTTCACTGCCTTCAAATGTCAGAAGGTTTTGGACTACCACATGAGATGGCATGATCCGTCGTCGGGTGAACATCTGTGTGACATATGCGAGATGAGGTTCAAGACTTACCTATCGATGAGGAAGCACAGAAACAACGTACATTACGGAAGATACCGGTGCAAGGTGTGCCCACTTATAACTTACCATAAAATGGTGATGATTCTCCATTTTAGGAAACATCAAGGCGTCGAATATAAATGCAAGCATTGTCAGaaggtttataaCCACAGCTCGACGTACCTCACACACATGCGCACGGCGCACCGCTCCGGACACACGTGCAGCGAGTGCGCAAGGACCTTCGTCTCGCCCGTCGGCTTGAGGGTGCACAGGCAGAAAGTTCACCAGTTATCACATACGTTACGCGCGGGTGAGAGCCAAGTGCAAATGGAAGGGTCAGGTGTCCACTGCCGCGACTGCGACATAACCTTCGCTAGCGACGACGTCTACACCGTTCATCTGCTACACACGCCTCTACACAAACACCTCGCTCAGGACATAATAGCTTGTCCAGAGTGCGGCAAACGTTTCGAAGACAAACTGAGCTTACGGACGCACAGACGGCAGTCGCATCCGAACTACAATTACTCTTGGTCGAAGAATGCAGACAAAACCGGAGTAAGGAAGGAGTTCAAATGTCGCGAGTGTGGTGCAACAGGCGTCCACAACTCGTGGCTATACAACCACTACCGTAGCAAACATCCGGAGCTGACGTACGAGGCGGCGGTGTACGACCACACGCGCCGGCATCTCTGCGAACACTGCGGGAAGAGCTTCGTGCACCACTGGCAACTCTCAGAACACACCCTGCTCCACTCGGGGCTCCGGCCACACACGTGCGGAACGTGCGGCGCCTCCTTCCGCACTGGCACCGCGCTGCGGACGCACAGCGAGCGCCATCTCCCGCCGAGGCGGCCGTGCCACGTCTGCGGGAAGAAGTTCGCTTCCGCCTCCAACCTGGCTAACCATATGAGGTCCCACACGGGCGAGCGGCGCTACAAGTGCTCGGTGTGCGACAAGGGGTTCCTCCACGCGGCCGCGCTGCGGGAACACGTGCGTGGCGTGCACTTGCATGTCAGGCGCGATCGGAGGCCTAAACCACATACTGTTGTTGACAATAAACATTGA
Protein Sequence: MIFYVLQKPVCSPNLKIAFHLENNNQMRSQVLRCNLLGVEVSSALKVGGGCTRGAGVTGGGGGRWRLTASPGESPAARATPTPAPYRINNVHCGPDLPYSMRHTCDIYVLSNTQRCVTGEKSVVSSQLCGRDQRCDDILDEVKEEAGLDDIESNGIINDSEINTNDIDSINDNDITSDNSEDDKFISQLLHEIKKKSSKIKKKIKKNDEFDKSHETPLKRKRQKQPLKNKQEYESIFDIVYFKNDDEAKAEFAVRQNSDYYKNAAFKCTVCFTAFKCQKVLDYHMRWHDPSSGEHLCDICEMRFKTYLSMRKHRNNVHYGRYRCKVCPLITYHKMVMILHFRKHQGVEYKCKHCQKVYNHSSTYLTHMRTAHRSGHTCSECARTFVSPVGLRVHRQKVHQLSHTLRAGESQVQMEGSGVHCRDCDITFASDDVYTVHLLHTPLHKHLAQDIIACPECGKRFEDKLSLRTHRRQSHPNYNYSWSKNADKTGVRKEFKCRECGATGVHNSWLYNHYRSKHPELTYEAAVYDHTRRHLCEHCGKSFVHHWQLSEHTLLHSGLRPHTCGTCGASFRTGTALRTHSERHLPPRRPCHVCGKKFASASNLANHMRSHTGERRYKCSVCDKGFLHAAALREHVRGVHLHVRRDRRPKPHTVVDNKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00836838;
90% Identity: -
80% Identity: -