Basic Information

Insect: Idaea biselata
Gene Symbol: Sall1
Assembly: GCA_958496205.1
Location: OY292406.1:9759334-9763397[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.46 34 5.9 0.5 2 23 29 50 28 50 0.90

2 16 0.1 7.5 7.9 6.8 1 23 122 144 122 144 0.97

3 16 0.0012 0.085 14.1 0.4 2 23 148 169 147 169 0.96

4 16 4.1e-05 0.003 18.6 5.3 1 23 174 197 174 197 0.97

5 16 0.018 1.4 10.3 2.3 2 23 208 230 207 230 0.94

6 16 0.00045 0.033 15.4 0.5 1 23 236 259 236 259 0.97

7 16 9.4e-06 0.00069 20.6 1.2 2 23 264 285 263 285 0.97

8 16 1.9e-06 0.00014 22.8 1.0 1 23 291 313 291 313 0.98

9 16 0.14 10 7.5 0.1 2 23 422 444 421 444 0.94

10 16 0.34 25 6.3 12.4 1 23 467 489 467 489 0.98

11 16 0.0031 0.23 12.7 0.1 1 23 493 515 493 515 0.98

12 16 0.0047 0.35 12.1 0.4 1 23 520 543 520 543 0.91

13 16 1.1 83 4.6 5.2 2 23 552 574 551 574 0.94

14 16 0.39 29 6.1 2.4 1 23 580 603 580 603 0.94

15 16 0.001 0.075 14.2 7.1 2 23 608 629 607 629 0.97

16 16 9.3e-05 0.0069 17.5 1.3 1 23 635 658 635 658 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.46	34	5.9	0.5	2	23	29	50	28	50	0.90
2	16	0.1	7.5	7.9	6.8	1	23	122	144	122	144	0.97
3	16	0.0012	0.085	14.1	0.4	2	23	148	169	147	169	0.96
4	16	4.1e-05	0.003	18.6	5.3	1	23	174	197	174	197	0.97
5	16	0.018	1.4	10.3	2.3	2	23	208	230	207	230	0.94
6	16	0.00045	0.033	15.4	0.5	1	23	236	259	236	259	0.97
7	16	9.4e-06	0.00069	20.6	1.2	2	23	264	285	263	285	0.97
8	16	1.9e-06	0.00014	22.8	1.0	1	23	291	313	291	313	0.98
9	16	0.14	10	7.5	0.1	2	23	422	444	421	444	0.94
10	16	0.34	25	6.3	12.4	1	23	467	489	467	489	0.98
11	16	0.0031	0.23	12.7	0.1	1	23	493	515	493	515	0.98
12	16	0.0047	0.35	12.1	0.4	1	23	520	543	520	543	0.91
13	16	1.1	83	4.6	5.2	2	23	552	574	551	574	0.94
14	16	0.39	29	6.1	2.4	1	23	580	603	580	603	0.94
15	16	0.001	0.075	14.2	7.1	2	23	608	629	607	629	0.97
16	16	9.3e-05	0.0069	17.5	1.3	1	23	635	658	635	658	0.96

Sequence Information

Coding Sequence: ATGACTGACGCGGAAAGAGAAAACGCGGCAACGCTCATGGAATTCACAACCGTCAGACCTTTTCTATCGCAGACGGCTTACATCAAATGTTTCTATTGCGACAGTACATTTACGGAAACCAATCTCGCTTCGACTCATTTAGCATCACACGAAACCCCATCACGTCAAGAGCTAAtgaatacttatttaaaagcAAAGAAGATCGTAAAAGTAGACGTATCAGATTTGAACTGCCGCATCTGCCAAGAGAAACACACAGATCTAGTCGAGATTCGAAAACACTTAATACTACAGCATAAGAAAGAGTTTAAAGCAGCCGAGAGTGGTCTAATGGCTTATGATTTGAATTCAAAAATTGGTGTTTTCTGTTGCTGTACTTGTAAAAAAGGATTTAACTCCTTTTTCGTATTGAACCAGCACATGAACGTCCATTTCAGCGTTGTCTGTGAAACTTGTGGACGCGGCTTCTCATCTTACACAAGGCTAATGAACCATAAAATCAGACACGAAAACGGGAACTACCGTTGCAAGATTTGCCCAGAAGTTTTCTCCAACAAGCATAAATTACGACATCATGTTAGCAAAAAACACAAAATCACTACGAAAACTTTACAACCGTCAAAGTGTCCGCATTGTCCTGAAAGGTTTTCGGGATACCATCCTCGAATGCGACATATGAAGGACGTTCATGGAATTGTCTTTACCTTCGAGTGTACGGAATGCAAAGCAGTCTTCCCTTACAGAAGACTGTTGACGGAACACACCAACAAAATCCACAAACAGAACAATCAATGCGACTATTGTGGCAAATGTTTCGGAACGCCAACTTTACTTCGGATCCATGCAAAGAGTCATACGGGGGAAAAGAACTTTATTTGCACTATTTGCCAGAAAGCTTATGCTTATAAAAAGGGTTTAAATAGGCATATGAAGACACATAATCATACTGATGCGCCACCAGAGCATGAAGACGGCAAGCATGATGGGAGGCAAAAGGCGGGAGATGGAAGCTCGCAGCTAACAATATCCGAACGCCGAAACGCAGCTAACTTCATAGCGCACACCACAGCGATACCACTCGCTTTCGGCCAAAATACTAACCACAAATGTTTCTACTGCAAACTTATATTCAACGACGCCGACATTAAAAAAGTTCTAGAACATACCAGAACTCACGATATACCAAAAGAAACCGAAATCTTCGAAAATTTACTCCCATCGGGGCAAGTCCGGACGGCTGTCAAAGTAGACATCTCTGAACTTAGTTGCAGAATGTGTCAGGAGAGCTATCCAGATTTAGAAGGGATAAAAGCGCATCTGATTTCGACACATAGCGTGTTTTTCACACCCGCTTCAAACGGTGTCATAGGGTACAATCTGACGGTAAAAGACGGCCAATTCCACTGCCATATTTGCAGTTGCAAATTTCACACTTTCTTCAAACTGAACCGCCATATGAATATTCACTTTAGCAAGTTTGTGTGCGAAACATGCGGCGCGACTTTCTTATCCCAACGACGTCTAAACGCTCACATTTTAATACATCGTCGTACGGGCTTCCCTTGCGCAACTTGTGGCAAAACCTACAAAACTGAGGCCTATTTGAAGTTCCACGTAGAAAAAGCTCATTTGGGGCAACAAAAGCGCATGCTTCGCTGCAGACATTGCCAGGAGAAGTTCAAGGAACATTACTTAAAGCTTAAACACTTGAAAGAAGCTCATGGGATCACTTTTACCTTCGATTGTGAAGCGTGCTCGTCTACTTTTCCTTCAAAATCGTTGTGGAGAAGTCACCATTACAGGTTCCATTCAGATAAAACGAAATGCGAGCATTGTAATAGGTGTTTTGACAGTTTAAATTCGTTGAAACAACATCAGTTCACTCATACGGGAGAGAGGAATTACACGTGTAAGATATGTTCCAAAACGTATAGGTATGATAGAGGTTTACGCACACATATGAAAGCGGTACATTCTTGCTGTTAG
Protein Sequence: MTDAERENAATLMEFTTVRPFLSQTAYIKCFYCDSTFTETNLASTHLASHETPSRQELMNTYLKAKKIVKVDVSDLNCRICQEKHTDLVEIRKHLILQHKKEFKAAESGLMAYDLNSKIGVFCCCTCKKGFNSFFVLNQHMNVHFSVVCETCGRGFSSYTRLMNHKIRHENGNYRCKICPEVFSNKHKLRHHVSKKHKITTKTLQPSKCPHCPERFSGYHPRMRHMKDVHGIVFTFECTECKAVFPYRRLLTEHTNKIHKQNNQCDYCGKCFGTPTLLRIHAKSHTGEKNFICTICQKAYAYKKGLNRHMKTHNHTDAPPEHEDGKHDGRQKAGDGSSQLTISERRNAANFIAHTTAIPLAFGQNTNHKCFYCKLIFNDADIKKVLEHTRTHDIPKETEIFENLLPSGQVRTAVKVDISELSCRMCQESYPDLEGIKAHLISTHSVFFTPASNGVIGYNLTVKDGQFHCHICSCKFHTFFKLNRHMNIHFSKFVCETCGATFLSQRRLNAHILIHRRTGFPCATCGKTYKTEAYLKFHVEKAHLGQQKRMLRCRHCQEKFKEHYLKLKHLKEAHGITFTFDCEACSSTFPSKSLWRSHHYRFHSDKTKCEHCNRCFDSLNSLKQHQFTHTGERNYTCKICSKTYRYDRGLRTHMKAVHSCC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -