Ibis023803.2
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- ZNF212
- Assembly
- GCA_958496205.1
- Location
- OY292404.1:16051992-16067503[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.11 7.8 7.9 0.5 6 20 12 26 6 28 0.86 2 13 0.032 2.3 9.5 0.1 2 21 33 52 32 53 0.93 3 13 0.42 31 6.0 0.2 1 12 196 207 196 216 0.88 4 13 7e-05 0.0051 17.9 1.9 1 23 365 387 365 387 0.99 5 13 0.012 0.85 10.9 2.7 1 23 404 426 404 426 0.98 6 13 7.8 5.8e+02 2.0 0.9 1 9 445 453 445 466 0.78 7 13 1.9e-05 0.0014 19.7 0.4 2 23 473 494 472 494 0.96 8 13 0.015 1.1 10.6 4.3 1 23 510 532 510 532 0.97 9 13 1.5e-06 0.00011 23.1 3.6 1 23 538 560 538 560 0.96 10 13 0.0003 0.022 15.9 5.7 1 23 566 588 566 588 0.98 11 13 9.9e-06 0.00073 20.6 0.4 1 23 594 616 594 616 0.98 12 13 0.00035 0.025 15.7 1.1 1 23 620 642 620 642 0.98 13 13 0.0021 0.16 13.2 0.0 1 23 650 673 650 673 0.96
Sequence Information
- Coding Sequence
- ATGGGAGACGCTTATTTGAATTGCCCTCTTTGCTGCGATAAAACTTTTGGTTCCAAAGAATCCCTCCTCGAACACTTGAGTAATTTAGACGATTTGCATTGTCCAGTATGTGGTGGAAAATTTCCCTCTTTGCAACGTTTAACTGATCACTTGAGAGTTGATAATTGCTTGCCAGTTAGCACAGTATCCAATCTAATATTTGAAAACAGTCCTGAAGCTGTGAACCATGATTTTCAGTCGGAAAACACAGATCATATTGAGTTTAAAACTTTAGAGAATGTGGGATCTATATCCGATGCTGACGATACCTTCCTTCCGGTTCAAACATTAGACTCAGCTGACGTCAGCAAAATGTATGTTGAACTGATGAAGCCCATAGACACTCAGGAACTGAAGCTGATTAAAGACTCGGCTGACAGATATGTGCTTATTACCAATGATGGTGATTTCAACCAGGAAGCTATTGTCACTAAGCAGAATCATGATGGAACTATTTCTTTGACTTctgtaaaagACATGAAAGTCGAGACAGACACTCTAATATCTCCGACTGACCATGAACCAGAAGGCAGTCAACCTGAGTTGTACAGCTGCAACACCTGTGGCGTCTCAtttgtctctgtcatcgaacatATTCAGAATTACCATAATGACCAGGATGTTGTAGTTGAGGGGCAATTAAACACAGTTAACGGGACATTGCCTGCAGAATTTGAATCTATAAAAGCGGAGGCTGAGCCGGCAGAGAAGCAACTGTCCAGACGAATGATCACTGATACTGGGGACATTATTGAAACTCCATTCCTTAGAGTCACTTCAGGACATATTTCTGacAATACTGCTGCAGAAGAGAACCCCAAGGATCAAGTGACAGAAAAGCGAGGTGGAAAGCGTTTTGTACAAGTTGACAAACTTTGTGACAGTGTTATTAAGGACCTTAAACAAAATGAGAACGGTCCGTTCCACAAGGTGGTCGTAAAGGAAGCGCTGACTTCTAACGGCACCATGTTGAAAATGTATAGATGTATGTGGTGCTGCATTACTGTGCGGTCATTGGGAGACTTCAAGCAACATCCGTGTAAAACATTGAAATATAAATGCACTCAGTGTTCTGTATCTTACGACAACGCGAAGTCATTATGTGCGCACATGAAAGTTCACAAAACGAAAACAACTTCTATAGACCCTCTGAAAGTCCTCCCCGAGTCGTTCGAGTGTGAAGTCTGTTGTACGGAGTTCCCAACGAACAAGTCTTTGAAACTACATAAAAGAATGCACGATCCGCCTAAattgaGACCAATAGAACCGCCCAAGAAAACCGAAGATGAGAAATTCCACTGCAATATATGTTCTAAAACGATACCAGTAGAGTACAAAACAGTTCACCAAAACTATCATAAAACGGACGACTCGTTAAACTGCACTGTATGTAATAAGAAATTTAGTTCAGCGGAGTTTTTGGAAATGCATATGAATGTACATAATATGGATAAAGCACCAATAAGTAAACAAGACCAGTCGCTACCCTACTGCTGCATGTACTGTGAGAGAAGGTTCGCGAGACCACACGAAAAGGTGAAGCATGAAAGAATACATACGGGCGAGAAGCCGCACGCGTGCGAGATCTGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCGCGCCCCTACGAGTGTCCGCACTGCGGGAAGAGGTTTAAAGCGCACAGCGTATACAACCACCACCTGTTGACGCACTCGGAGGTGCGCGCGTACAAGTGTCCCTTCTGTCCGAAGGCGTTCAAGACGTCCGTGCAGTTGGCCGGACACAAGAACTCGCACACCAAGCCCTTCTCCTGTACAcattgtaacagGCCATTCGCGTCCCTATACGCCGTGCGCGTGCACACAGAGACGCACGCGCGGCAGAACAACCTGAAGTTCTCGTGCGCGCTGTGCGGCGCGAGCTACGCGCGGGCCTTCGCGCTCAAGGACCACGTGAAGCAGGCGCACGCCAGCCCGCCTGACCGAGTCGACTCTAACGATGCCAACGATACACCGACGGAACAAGAAGACTGGGAAGTTAAAGAGatGTACCAATTGGATAAAGTAAACGATGAGATGATTGTTCCTAATTAA
- Protein Sequence
- MGDAYLNCPLCCDKTFGSKESLLEHLSNLDDLHCPVCGGKFPSLQRLTDHLRVDNCLPVSTVSNLIFENSPEAVNHDFQSENTDHIEFKTLENVGSISDADDTFLPVQTLDSADVSKMYVELMKPIDTQELKLIKDSADRYVLITNDGDFNQEAIVTKQNHDGTISLTSVKDMKVETDTLISPTDHEPEGSQPELYSCNTCGVSFVSVIEHIQNYHNDQDVVVEGQLNTVNGTLPAEFESIKAEAEPAEKQLSRRMITDTGDIIETPFLRVTSGHISDNTAAEENPKDQVTEKRGGKRFVQVDKLCDSVIKDLKQNENGPFHKVVVKEALTSNGTMLKMYRCMWCCITVRSLGDFKQHPCKTLKYKCTQCSVSYDNAKSLCAHMKVHKTKTTSIDPLKVLPESFECEVCCTEFPTNKSLKLHKRMHDPPKLRPIEPPKKTEDEKFHCNICSKTIPVEYKTVHQNYHKTDDSLNCTVCNKKFSSAEFLEMHMNVHNMDKAPISKQDQSLPYCCMYCERRFARPHEKVKHERIHTGEKPHACEICGKSFRVSYCLTLHMRTHTGARPYECPHCGKRFKAHSVYNHHLLTHSEVRAYKCPFCPKAFKTSVQLAGHKNSHTKPFSCTHCNRPFASLYAVRVHTETHARQNNLKFSCALCGASYARAFALKDHVKQAHASPPDRVDSNDANDTPTEQEDWEVKEMYQLDKVNDEMIVPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00836832;
- 90% Identity
- iTF_00836832;
- 80% Identity
- -