Basic Information

Insect: Idaea biselata
Gene Symbol: -
Assembly: GCA_958496205.1
Location: OY292399.1:3692801-3695600[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.3e-07 3.2e-05 24.8 2.8 1 23 232 254 232 254 0.98

2 11 0.039 2.9 9.2 2.5 1 23 262 284 262 285 0.92

3 11 9.1e-06 0.00067 20.7 0.4 1 23 290 312 290 312 0.95

4 11 4.2e-05 0.0031 18.6 2.6 1 23 319 341 319 341 0.98

5 11 0.059 4.4 8.7 5.1 1 23 347 369 347 369 0.99

6 11 0.00055 0.041 15.1 2.7 1 23 375 398 375 398 0.96

7 11 0.0046 0.34 12.2 2.2 2 23 404 423 403 423 0.97

8 11 7.6e-06 0.00056 20.9 2.9 1 23 429 451 429 451 0.98

9 11 1.1e-05 0.00079 20.4 2.0 1 23 457 479 457 479 0.99

10 11 6.5e-05 0.0048 18.0 0.4 1 23 485 508 485 508 0.96

11 11 0.0005 0.037 15.2 0.8 1 21 514 534 514 535 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.3e-07	3.2e-05	24.8	2.8	1	23	232	254	232	254	0.98
2	11	0.039	2.9	9.2	2.5	1	23	262	284	262	285	0.92
3	11	9.1e-06	0.00067	20.7	0.4	1	23	290	312	290	312	0.95
4	11	4.2e-05	0.0031	18.6	2.6	1	23	319	341	319	341	0.98
5	11	0.059	4.4	8.7	5.1	1	23	347	369	347	369	0.99
6	11	0.00055	0.041	15.1	2.7	1	23	375	398	375	398	0.96
7	11	0.0046	0.34	12.2	2.2	2	23	404	423	403	423	0.97
8	11	7.6e-06	0.00056	20.9	2.9	1	23	429	451	429	451	0.98
9	11	1.1e-05	0.00079	20.4	2.0	1	23	457	479	457	479	0.99
10	11	6.5e-05	0.0048	18.0	0.4	1	23	485	508	485	508	0.96
11	11	0.0005	0.037	15.2	0.8	1	21	514	534	514	535	0.95

Sequence Information

Coding Sequence: ATGGCTAATGCAAAGAGTAGATTAAACGCACCCAAAAGTGCAACTACTAAGAGAAAACGGGGTAGATCAAAACGGTCactgaataaaaacaaaaaatcctCAGATTCCACAACCAGTCCTGAGGATAATGTGGTCATGAGGAGACCGAGTAACTTGAAAACTTTGACAACGGAGGAGAAAGTTCAATTTTTGCTACAAAACGGACATTTACTAAAAGATCAATTTACTGTCAGATCTCCACCAAAGCCTGCTAAACAGAGAGAAGCAGCTTTTGAGAAACCTAAACCGTTGTCTAGAACAGAAAAGTTGTTACGGACAAGACCAATCATATCACCTGATGGGAGCATCAAACACAAGACAAGGAGCAACTTACGGTTGATCGACGACATCCTCAAAGGTGAACTTATGATCACCAACACTAGCAAACCCAAAGATGTTAGTCGAAAGCAACAAAAAGGTCAATCggtaaacaataataatgaaTTAGGAATAAGTGATCAAAATGACACAAAtcataagaaaaaaacattaaacaaaaccaaaGATTCCAAAATCTTATCCAAatctaaaactattaaaaagaATACGGCTAAAAGGAAAAAAGATAAAGATACTATCAGTATCAAAAGTAAAACCAATTTGAAAACAAAGCAAGTCACTCTGAGCAACGGATTGGTACTAACTCTAACACTGTTCCAATGTGATTATTGTAAAAAGATGTTCAGTGGAAAATCTTCCCTTCGTCGTCACATCTACACTCACTTGAAAGTCTCATACAGACCTTTTGCTTGCAAGAAATGTGCAATGAAGTTCCGGAACAAAATCACCTACCAAACTCATGTGGATGGTCATCATCCTGATGCACCATTCCTGTGCAATATATGCGACAAAACATTCACATTAGAGGAAAATCTTACATTACACTTAGAGACTCATGTAAAGAATGAAAATTCATACAAATGTATGTACTGTGACAAAAAATTCTCATACAATGTTTTGCTAACGCAGCATGAGAAGCAGCACCTTGTGACTGGCCGGTATCAATGTACAATATGTAGCATAAGCTATGACTGTCGGAACCATCTGTCTATGCATATGAAGAGCCATTTGAAAATTAAAGATTACATCTGTCAATATTGTGGCAAGGAATTCCAGAGGATGAATTCTATGAGGCGTCATGTGCAAATATGTCACGGTGGGCATAGGATCCAGTGTCCGATTTGTAAGAAGAAGTTGAAGGGTCATTTGACTGAGCATATGAGGACGCATAAGCAAGCTCGGCCCCATGAATGTGAGCAATGTGGTCAACGTTTCACACAGTCCACTCAACTGACTGTCCATAAGAGATCTCATACTGGCGCAAGGCCATACACCTGCAGGATCTGCCAACGTCCCTTCACTCATTCTAATGCTCTAATGCTGCATATTCGGCGCCATACTGGCGAGAAGCCTTTCGCTTGCGCCATGTGCCCTATGTCGTTTTCACAGTTACCACATATGAAGGCTCATATGCGTAATATCCACGGCAAAGATCTGCCGTATAAGTGTCCTAAATGTGATCAGTTCTTCAAGCTGAAGAGTGAAGTGGAGAATCATACGAAGGATTGCACGGTTGGCGAGCGCGAGTTAACGTTCGAAGAGAGGATCCAGGCTTCCGTGCAATACGAAGAGGTGGAGGTAGAGTCGCCTATGACCCTATCTCGCATGAGGTTTCTCCTCGCGCTCTTATTCACAATGATCGCTACCAAAGAAAAACTCAAATTTCTAGGGTTTAATAAACGCCTGATCGACGACCTGCTTGTGGAGTCCCTTGAAGCGATGGGCCAGACGCCTTGCAAGGACGCCTCTTTGCAGCCCTTCAAACGGTTGAAATCCAACATCCAGCTGTTGTTAAACGGAACAATACCCAAAGATCAGATGGAAAAGTTTCAGAAGGACAAGAAATCAACTGAGGAACTTCTGGAACTTCTAACAGATGAGAAGAAAAAGGAAGAATAG
Protein Sequence: MANAKSRLNAPKSATTKRKRGRSKRSLNKNKKSSDSTTSPEDNVVMRRPSNLKTLTTEEKVQFLLQNGHLLKDQFTVRSPPKPAKQREAAFEKPKPLSRTEKLLRTRPIISPDGSIKHKTRSNLRLIDDILKGELMITNTSKPKDVSRKQQKGQSVNNNNELGISDQNDTNHKKKTLNKTKDSKILSKSKTIKKNTAKRKKDKDTISIKSKTNLKTKQVTLSNGLVLTLTLFQCDYCKKMFSGKSSLRRHIYTHLKVSYRPFACKKCAMKFRNKITYQTHVDGHHPDAPFLCNICDKTFTLEENLTLHLETHVKNENSYKCMYCDKKFSYNVLLTQHEKQHLVTGRYQCTICSISYDCRNHLSMHMKSHLKIKDYICQYCGKEFQRMNSMRRHVQICHGGHRIQCPICKKKLKGHLTEHMRTHKQARPHECEQCGQRFTQSTQLTVHKRSHTGARPYTCRICQRPFTHSNALMLHIRRHTGEKPFACAMCPMSFSQLPHMKAHMRNIHGKDLPYKCPKCDQFFKLKSEVENHTKDCTVGERELTFEERIQASVQYEEVEVESPMTLSRMRFLLALLFTMIATKEKLKFLGFNKRLIDDLLVESLEAMGQTPCKDASLQPFKRLKSNIQLLLNGTIPKDQMEKFQKDKKSTEELLELLTDEKKKEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00836801; iTF_00834872; iTF_00837789;
90% Identity: iTF_00836801;
80% Identity: -