Basic Information

Insect: Idaea biselata
Gene Symbol: -
Assembly: GCA_958496205.1
Location: OY292406.1:13974864-13984119[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0014 0.1 13.8 0.6 1 23 154 177 154 177 0.93

2 20 0.15 11 7.4 2.2 1 23 204 227 204 227 0.98

3 20 0.0037 0.27 12.5 1.0 2 23 250 271 249 271 0.97

4 20 0.02 1.5 10.2 0.4 1 23 275 298 275 298 0.94

5 20 0.48 35 5.8 4.6 1 23 303 325 303 325 0.97

6 20 1.9e-05 0.0014 19.7 1.4 2 23 361 383 360 383 0.97

7 20 0.00038 0.028 15.6 1.1 1 23 391 413 391 413 0.95

8 20 0.023 1.7 10.0 0.2 1 14 419 432 419 435 0.92

9 20 0.2 15 7.0 0.8 1 23 460 483 460 483 0.92

10 20 0.29 21 6.5 0.2 2 23 511 533 510 533 0.96

11 20 0.051 3.8 8.9 0.7 2 23 556 577 555 577 0.96

12 20 0.016 1.2 10.4 0.7 1 23 581 604 581 604 0.92

13 20 0.036 2.6 9.4 3.4 1 23 609 631 609 631 0.98

14 20 0.16 12 7.3 0.1 1 23 751 774 751 774 0.97

15 20 0.0034 0.25 12.6 0.8 2 23 797 818 796 818 0.97

16 20 0.0095 0.7 11.2 0.4 1 23 822 845 822 845 0.91

17 20 0.00016 0.012 16.7 0.2 1 23 850 872 850 872 0.98

18 20 6.7e-06 0.00049 21.1 2.3 2 23 908 930 907 930 0.97

19 20 0.00011 0.0078 17.3 1.9 1 23 936 958 936 958 0.98

20 20 9.9e-06 0.00073 20.6 0.9 1 23 964 987 964 987 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0014	0.1	13.8	0.6	1	23	154	177	154	177	0.93
2	20	0.15	11	7.4	2.2	1	23	204	227	204	227	0.98
3	20	0.0037	0.27	12.5	1.0	2	23	250	271	249	271	0.97
4	20	0.02	1.5	10.2	0.4	1	23	275	298	275	298	0.94
5	20	0.48	35	5.8	4.6	1	23	303	325	303	325	0.97
6	20	1.9e-05	0.0014	19.7	1.4	2	23	361	383	360	383	0.97
7	20	0.00038	0.028	15.6	1.1	1	23	391	413	391	413	0.95
8	20	0.023	1.7	10.0	0.2	1	14	419	432	419	435	0.92
9	20	0.2	15	7.0	0.8	1	23	460	483	460	483	0.92
10	20	0.29	21	6.5	0.2	2	23	511	533	510	533	0.96
11	20	0.051	3.8	8.9	0.7	2	23	556	577	555	577	0.96
12	20	0.016	1.2	10.4	0.7	1	23	581	604	581	604	0.92
13	20	0.036	2.6	9.4	3.4	1	23	609	631	609	631	0.98
14	20	0.16	12	7.3	0.1	1	23	751	774	751	774	0.97
15	20	0.0034	0.25	12.6	0.8	2	23	797	818	796	818	0.97
16	20	0.0095	0.7	11.2	0.4	1	23	822	845	822	845	0.91
17	20	0.00016	0.012	16.7	0.2	1	23	850	872	850	872	0.98
18	20	6.7e-06	0.00049	21.1	2.3	2	23	908	930	907	930	0.97
19	20	0.00011	0.0078	17.3	1.9	1	23	936	958	936	958	0.98
20	20	9.9e-06	0.00073	20.6	0.9	1	23	964	987	964	987	0.97

Sequence Information

Coding Sequence: ATGATAAACCTAGtcctactggcgccatctatgCGGTCAGCTCTGAAAGCACGCAGGCACACGAAGAAAAATCAAGCGGCCCGAGCTCGGGCGACAGAAGTACCGCGGCCCTCCCCGCGCCGGGTCTGCGTCTCAGTGAAAGAGCCGGCCGCATCCAGCCCGTGCGCAGGCGCACGTACAGCTGGATCAAAAGACTCGACATCGACGCGGACGGACCGCCGACGCCCGTCACTGTCAGTCTACCATTCGCTCTTCGTGATCGATGAGTCAAGACGTTTGACCGAAGACTGTGTCACTCAATCGAAACCAATCAAGACCAAAGGCTGTAAATCTGCAAAAATATTTGGTTCACTTTGGGTGAAAGACAATAAACAAGAATTGAAGGAGACTAGAAATaattcactacaaatattgagATACTCTAACTGTACGCCGTTTAGGGATTATAAAGGATTACATTATTATTGCATGTATTGCGAATCCAGGTTCCCGTCGCCGAGTGCACTCAAGAAACACACTTTGGATTCGCATGCTGAAATCAAAGTGTCTCATATagaaaactttataaaaaagaattatGGTAGATTGTTGAAATACGACCTATCTCACTTTAAATGTAACCTCTGTAACTTAGAAATAGATACTATGACACATTTCCTAgaacatattaaaacaaaacacaacaaAGAAGTTTACATCGGGGCTAAAAATGAAGTTATACCTTTTAAATTTGAATCCGAACAACTGACATGTTTTATGTGCAAAAAGATTTTTGGtaactataaatatttattggacCATGTCAATACACACTACAGTAATTTCATTTGCGGTATATGTAGCTCCGGATTTGTGAAGTCGTTTCAACTGCGCAATCATTTGTCTCAGTTGCATAGAGTTGGAAAGTTTTCTTGTTCACATTGCCCTAAAATCTTAAAAACTGCCAAAGCAAGACACTATCATGTTAAGAAACATGTTGATAACAAGGACCTGAAATGTGGGTTTTGCAGTGAAAAATTGTCCGGTCAAGCTACGAAAGATAAGCATATGATAGAAAAACATGGCGCAGATATTGACACTACTTGTAAAATTTGCAACAAAGTATTTCCACATCGTAGAGGCTTACAGGTGCATGTTAGAAGAGTCCATCTATTTGAACGTCGGCGTCGCTTCAAATGTACCGACTGTGATATGTCCTTCTTCACTCGTTGGGAGCTGAACGATCATAGCGTGAAACACTCAGATTTAAAAGAATTCGAGTGTGATTTGTGTAACAAAACATTTGCTAGAAAAGATTTAAAGGAAACTAAACATAACTCACTACAAATATTGAGATTCTCTAACTCTACGCCGATAAGGACGTATAAAGGCCGCGATTATTATTGCAAATATTGCGAATTCAAAAACCCTTCTCCGGATGCTCTCAAGAAACATACTCTGGACTCACATGCTGAAATCAAAGTGTCATATATAGACAAATTTTATACCAAGAGTCGTCACACTTTGTTAAAATACGACTTAACTAATCTTAAATGTAACCTGTGTGATGTCGAAATAGATACTATGGAAAATTTCTTGGAACATATAAAATCGAAACACAACAAAGAAGTCTACATCGACGCTAAAAATCATATATTACCCTTCAAATTTGAATCCGAACAACTGACATGTTTTATgtgcaaaaatgtttttgattctTTCAAATACTTGATGGATCATGTCATTACACACTACTGTAATTTCTTCTGCGGTATATGTAGCTCCGGATTTGTGACATCGCAACAACTGCGCAATCATCTGTTCAATTTGCATAGAACTGGAACGTTTCCTTGTCCGCTCTGCCCTAAAATATTTGATACCGAAAGAAGAAGATGCCATCATGTTAAGACGCATGATAAGAAGAATAGATTCAAATGTTTGTCCGAGGGCAGTGTTGCTCAACCGAAATCAATCAAGACCGAGCACTATCAatctgcaaaaagatttggtTCACTTTGGATCACAAACAACAAACAAGACTTAAAGGAGAGTAGACATAATTCCCTACAAATATTAAGATACTCTAACTCTACGCCGATAAGGACGTATAAAGGTCTCCACTATCATTGCATATATTGCGAATTCAAGAATCCGTCGCCGAGTGCACTCAAGAAACACACTTTGGATTCGCATGCTGAAATCAAAGTGTCTCATatagaaaactttttaaaaaagaattatgGTAGATTGTTGAAATACGACCTATCTAACTTCAAATGTAATCTCTGTAATGTAGAAATTGATACTATCGAAGATTTCTTGGCACATATAAAGTCTAAACACAACAAAGAGGTCTTCACCGAAGCCAAAAATCAAGTTATGCCTTTTAAATTTGAATCCGAACAACTTACATGTTTTATGTGCAATAAGATTTTtggtaaattaaaatatctaatgGATCATGTTAATACACACTACTGTAATTTCGTTTGCGGTATATGTAGCTCCGGATTTGTGACGTCATTTCAACTGCGCAATCATCTCTTTGATATGCATAGGACTGGAACGTTTCCTTGTCCGCAATGCCCTAAAGTCTTTGCCAACGAATCGAAAAGGCGCGACCATGTCAATAGGCATGAAAGGAAGAAAACCCTAAGATGTGGGTTTTGCAGTGAAAAATTGTCCGGTCAAGCTACGAAAGATAAGCATATGATAGAAAAACATGGCGCAGATATTGACACTACTTGTAAAATTTGCAATAAAGTATTTCCTCATCGTAAAGGCTTACAGCGGCATGTTAGAAGAGTCCATCTATTTGAACGTCGCTTCAAATGTACCGACTGTGATATGTCCTTCTTCACTCGTTGGGAGCTGAACGATCATAGCAAGAAACACTCAGATCTAAAAGTATTCGAGTGTGATTTGTGTTTTAAAAGATTTGCCAGGAAGCCAAGCCTCGCGCGGCATATGATGAAAAGTCATCAAGATAACGCAAGCGTGTCTTCTGCGTAA
Protein Sequence: MINLVLLAPSMRSALKARRHTKKNQAARARATEVPRPSPRRVCVSVKEPAASSPCAGARTAGSKDSTSTRTDRRRPSLSVYHSLFVIDESRRLTEDCVTQSKPIKTKGCKSAKIFGSLWVKDNKQELKETRNNSLQILRYSNCTPFRDYKGLHYYCMYCESRFPSPSALKKHTLDSHAEIKVSHIENFIKKNYGRLLKYDLSHFKCNLCNLEIDTMTHFLEHIKTKHNKEVYIGAKNEVIPFKFESEQLTCFMCKKIFGNYKYLLDHVNTHYSNFICGICSSGFVKSFQLRNHLSQLHRVGKFSCSHCPKILKTAKARHYHVKKHVDNKDLKCGFCSEKLSGQATKDKHMIEKHGADIDTTCKICNKVFPHRRGLQVHVRRVHLFERRRRFKCTDCDMSFFTRWELNDHSVKHSDLKEFECDLCNKTFARKDLKETKHNSLQILRFSNSTPIRTYKGRDYYCKYCEFKNPSPDALKKHTLDSHAEIKVSYIDKFYTKSRHTLLKYDLTNLKCNLCDVEIDTMENFLEHIKSKHNKEVYIDAKNHILPFKFESEQLTCFMCKNVFDSFKYLMDHVITHYCNFFCGICSSGFVTSQQLRNHLFNLHRTGTFPCPLCPKIFDTERRRCHHVKTHDKKNRFKCLSEGSVAQPKSIKTEHYQSAKRFGSLWITNNKQDLKESRHNSLQILRYSNSTPIRTYKGLHYHCIYCEFKNPSPSALKKHTLDSHAEIKVSHIENFLKKNYGRLLKYDLSNFKCNLCNVEIDTIEDFLAHIKSKHNKEVFTEAKNQVMPFKFESEQLTCFMCNKIFGKLKYLMDHVNTHYCNFVCGICSSGFVTSFQLRNHLFDMHRTGTFPCPQCPKVFANESKRRDHVNRHERKKTLRCGFCSEKLSGQATKDKHMIEKHGADIDTTCKICNKVFPHRKGLQRHVRRVHLFERRFKCTDCDMSFFTRWELNDHSKKHSDLKVFECDLCFKRFARKPSLARHMMKSHQDNASVSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -