Ibis012763.1
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- -
- Assembly
- GCA_958496205.1
- Location
- OY292398.1:10777991-10786869[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0045 0.33 12.2 1.6 3 23 205 226 204 226 0.96 2 23 0.057 4.2 8.7 0.3 1 21 614 634 614 635 0.96 3 23 9.7 7.2e+02 1.7 0.4 3 23 677 698 675 698 0.90 4 23 0.0079 0.58 11.4 3.0 3 22 709 728 709 728 0.96 5 23 0.027 2 9.8 0.9 2 23 736 758 735 758 0.95 6 23 0.011 0.85 10.9 0.2 3 23 781 802 779 802 0.96 7 23 0.00035 0.026 15.7 0.8 1 23 808 831 808 831 0.96 8 23 0.12 8.8 7.7 0.0 1 23 856 879 856 879 0.90 9 23 0.00042 0.031 15.4 1.6 1 23 884 906 884 906 0.98 10 23 0.0093 0.68 11.2 0.2 1 23 912 935 912 935 0.95 11 23 0.02 1.5 10.1 3.8 1 23 948 970 948 970 0.97 12 23 0.00017 0.012 16.7 1.8 1 23 1026 1049 1026 1049 0.97 13 23 0.0018 0.13 13.4 1.6 1 23 1112 1135 1112 1135 0.96 14 23 0.0037 0.27 12.5 2.2 2 23 1162 1184 1161 1184 0.95 15 23 0.24 18 6.8 0.1 2 23 1190 1212 1189 1212 0.93 16 23 0.0069 0.51 11.6 0.1 1 21 1256 1276 1256 1277 0.95 17 23 0.0012 0.086 14.0 0.6 1 23 1287 1309 1287 1309 0.93 18 23 0.00011 0.0078 17.3 0.3 2 23 1400 1422 1400 1422 0.93 19 23 1.7e-07 1.3e-05 26.1 1.1 3 23 1429 1449 1428 1449 0.98 20 23 0.023 1.7 10.0 0.1 2 23 1468 1490 1467 1490 0.95 21 23 0.11 8.5 7.8 0.0 1 23 1511 1533 1511 1533 0.97 22 23 0.041 3 9.2 0.4 1 23 1539 1562 1539 1562 0.95 23 23 0.00024 0.018 16.2 0.4 1 23 1570 1593 1570 1593 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAAATACTGCCGATTTTTCCTACCACCAGTTCGGATGAGGCGGAACCTCACGTCCTCGCTACAAAAATCAAGGATTGCGTCTCTGTGCAGATAAACGAAGACGACAATCTACCGACGAATGTCTGCAGGAAATGCATGGACAATGTCAACAACTGGCATGTATTCAAGACTGTGTGTAAAAAGACGCAAAACAAACTACAGTCTCTGATTAAAAGGGATGGCAGCCTACTAGAAGAGGTGAAAATCAAAAGTGAACCTTTGTCTGATGAGATTTATGATGATGGAGTGGTTATTGACGCGTCATACCCTGATGAGCACTCGCATTCTGCAAAGATACAACCGGAAGGCCCTCCGATCTTGGCTTCCTTGGGACTTACACCACGAAGTGATAAGGGTGTCGAGAGTGaaaaagatgaagaagaagaattcGAAGAGGAGTCTTTGCCGGTACCCCAACCGGTAAAAGTACCAGCCATGCCTGAGGTTTCAATCACAGTTATGCGGCCAACCGGTGAGACCCTTCATGCACGACAAGGCATCCAGCAAATCGCGTCGAAAGACTGTCTTATCTGTGGACGAACGTACAGGTACTCACACAACGCTCGGCGGCACGAACTCACATCACATGGCTTCGACcgatatacaaacaaaatatccAAACAGAGATCTGTTCATCATACCCGAAGCCACCACATGCAGCCCAAACTTAGACCTAACCCGTTCAATCCCAAAGCGAGGCTCATGCCTAATCCGATTAGCCACAAAATGCAGTTAGTATCCAAAAAAATTCAACCAAAATTAATACCTCAAAAAATTATTACTCCACCCAAACCAATACCTATTAAAACCCCGAAAGGACATTCAAATAACTTACCATACCCATTACGTATAAAAGCACTGAAGGATTTGCAAATAAAGAAAAAGGAACCACAAATATTGAAAACTTTATTAACTTCTAAGCCTGAAGTTCTAGTATCTGAGCCGGAGATTATGAATTCCGGACCGGAGAGTCCTGAGACGTTGATATCTGAACCGGAAATAGCGTCTTTCCAAGTGGAAACTATTTTGTCAGAACCTAATGACCATGAGCCTGATGAGGCTGATCCTGAAGTCGATCCCAATCAGGAAATGGAAGATGAAGGTGAGATGCCAAATAATCAGACTCAAAATTACGACACTCTTGATATGGAATCAGATAATGAAATCGAAATCGCAAGAGAACAAGATAACGAAGGTGATATTGTTGAAAATAACGATGAAGATAATGAACACATACTGCCTGACGACTATAACCACGTAGAAGAAGCAGAAATTGACGGAGAAATTGATCGAGACAATGACACCGTTGACAGTCAGCAGATGGAAATTGATGATAGCTACCTTACTAAACGAGAGAAAGACGAAGAAGAACCTAACGAAGAAGAGGAGAATGATGATCACGAACAGAGTCAAGATGGAGAGGAGAACGAATATGAAGAAGTGCCAGTTGTACCAGAAGTCGAAATTAATGAAGAAATGCAGAATAATTCTTACAACAGTGAAGCAAATGAAGAAGAGGAGGAAACTGAAGATAACGGTGACATCAACGATACCGTCGATGATGAAGAAAATAAAGAACTCGATCCTGATAAAACTTACGTAACGAGAACCCAACAGGATTTCATTAATAAATTTCGTGACGTCATTCTCCAAATCAATACAAAGAAATGCTTGTGTTGTCAAAAGGAATACCCTCGCCGCAAAGCGGTTATACAGCATTTACAGAAAAACGGTCAAAAAGTACCGAAACATACGTGCTACAACTGCGTAGTTACATTCACCCATATTGGTGCATTACTTAGTCACATGAGGGCAAACTGTTGCACAGATCTCTGGAAGATTATTTACGACGAAAACGGTATCACTGAAGATATGGTCATCGAAGAACCTAAAAGCAAGGTCCAAGCCAAAGATATTTTCAACGCACGCTCTTATGGTTGTAAGTTGTGTCCTGCTAAATTCCAATTGAAGCAATCGATCATGAAACATGTGTCAGAGTTCCATGAAGATGGACAATCAGCGTCACCACTCGGCTGCGTACATTGTCGAACTCATTTCAAAGATAAAACATTACTTAAAAAACATATCCGCGTCGGTGAATGCACAGTTAATATCCATTGCAACGTTTGCTCTGAACAATTTTCTACTACCCAAGAATTTAACGATCATGCTATGACTGTACATGCCGATCACTTTGAGAAAACCGAGAATGACAGTACGAACAAGTGCGTCGATGGTCGCGTCACCGATTGCCCTCTGTGTGGAAAGAAAAACAGCAATTATATCAACTTGGTAAAGCATTTGAAGATGGCACACGACGAAGATAGGCCACACTATTGTCAAAACTGTGACGCGAAGTTTGAGCAAGCGGGGGATCTTAACAAACATATTTACACGGAACATTCTCACCAGGCGTTAGGTCAGGCCAATGAACCCGATATGTCGCTAGTGAAGGAAGAAGCGGAGGAGTATCACTATTCATGTACAGAATGTAACGCTATATTTGAAACAGTTGATGCGTGGACTGACCACCAAGTGGCTGAGCACAATCAAATTGCGCACCAATGTGACCAATGTGATAAAAAGTTCCTACGCCCTTCAGAACTTGCCGAacataaaaatacacatttgcGGGTTAAATTCTATCCTTGTAGCATTTGTTCCAACTCTTACAGCACTCCGCAGAAGTTATCCGATCACGTGCAACAGGCTCATCCTGGGGCTGGCGTGAATGCGAGTGGGGAGACTGAATTTTTCTGTGTTCATTGTATTCGATCGTTTAAGAGTCGTCAAGCTTTCTCGAACCACATGCGTATACATGCCAAAGTTCCTACAACTAACAGGAAACCTAATACTGCTGAGCCAAAAGGATTCGATCCTCGTATTATTGGGAAgccaataaaacaaattaacctTGCTCAACACGTTCAACAACAGCCCGGTTTCGTCAACTTCAAGCCAAATATTAACGTTCCTAATGCTCCTTATTCGTGTGATATTTGCGGTAAAGGCTTCatgcacaaaaaaaatatttggaagCATAAAAAAGTACTGCATGCTGATATTTTAAATGACAGACATGATAGTGAGGAGAATACAATGCAAGCCTCCACTGAAGAGGATGACTTCAACGTTGACGAAAACGGGTCCTTGCTTTCGACACCACAGTTCAACAGCTTTAATTTTACGAACTTTCCTAATAACACACAACAGCAGCAGCAACAGCAACAGGAGTCTTTGCCTTTCTCTTGCGAATTGTGCTCAAAGAAGTTTCCGCTCAAGACTAGTTTATGGAAACACAAGCGGGCCAAGCATGGAATAACAAATCCCGGTGTTGTAAATGAGACACAAACTTTATCCAATACATCATCGATTGAAGGCGGCAGTCGCTCCAGTTGTACTATTTGCAAAATAACTTTCCCCGACAAGAAATCCTATTATCGTCATCGAAAAAATTTCCACAAGACTGCAACTCAAATGTGTAAACTCTGTGGGAAACCTTTGAATTCGACTTTAGAACTTTATGAGCATTTGAAAGCGGCTCATGCCAGGGAACTGTTGGGTTATAATGCTAATCAAAGCACAAGCAAGACTCAAGATACATCTCAAGATATGGATGGGGACTATGATAACGACCAAGATGCAGTAGATCCGAGCGTCGACTACCAGGCTAGATATCCCTGTGATATGTGCGGAAAACAATTTGTCGGACTTCTTGCTTTACAAAACCATCAATGCGTCAACCAACCATCTTCGCAACCGCAAACATTTGACTGTGAAATTTGCCACAAGAGCTATACTTCTATTGCCGCTTTGAAGAGTCATCGCGGCTGGCATTTACGTTCACCTGACGGCAAAGCGGCGGCTAATAATAGCGGGCTCTGGATGCCTCAGCACAAAGTGACGAGCAAAGTGAGCAAGCATGAAGTGGTAGACGCATCGCAGTTAGCTCGAGTACAACACACGACGACGACCACTCCCACCTCGGTTGCGAAAAGAAGACTACCACCTGAGGTCGAAGTAACCGTCGTCAATCCCAATAAAAAGCTACGTTCAGATGATTCCGTCGAAATGGATCAACAAAACAATGACGCTGTCGAGGGAAGGTACTGCACGATATGCGACAAAGAATTCACGAAACGAGCTGCCTATCAACGCCACATGGACGAAGTACATCAACCCAATTCAGTGTTCTGTCCAGTCTGTGACAAGAGTTTTACGCGCAAATCTACACTAATCGTCCACATGAAGAAACACTACGAATCTGGCGAAGGTAGCTCTTCGACAGCGGCTCCGGATGACGACGCTCTCTCTTGTGACGTCTGCGGAGCGCAATTCGACAACGAATTCGCGTTAAGTTCACATCGGGCGACAAGTCACGCCGAGGATTCTGGAGAATCAGATGATGATGGCAATGTTCCTATCGCACAACCGGGAGAGTTTACCTGCGGTCAGTGTGGTGATGGTGTCGCTACTCCTCGGGATCTGATCGCGCATCGCACAATGCACTCTACGCCCACGAAATTCTTCTGTAACATTTGTTCAGTGTACTTTGCTCGAGCTTTGGATCTCTCATCGCATACGCGCGCGCGTCACGCTGACAACGAAAAGGTTTTCTTCCCGTGTGCTATGTGCGACCGATTCTACATGAACAAGAAGAGCTTACAGCGTCACATCGAGATGGCACATtga
- Protein Sequence
- MNVNYDRVCRLCLSSRGEILPIFPTTSSDEAEPHVLATKIKDCVSVQINEDDNLPTNVCRKCMDNVNNWHVFKTVCKKTQNKLQSLIKRDGSLLEEVKIKSEPLSDEIYDDGVVIDASYPDEHSHSAKIQPEGPPILASLGLTPRSDKGVESEKDEEEEFEEESLPVPQPVKVPAMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRTYRYSHNARRHELTSHGFDRYTNKISKQRSVHHTRSHHMQPKLRPNPFNPKARLMPNPISHKMQLVSKKIQPKLIPQKIITPPKPIPIKTPKGHSNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPNDHEPDEADPEVDPNQEMEDEGEMPNNQTQNYDTLDMESDNEIEIAREQDNEGDIVENNDEDNEHILPDDYNHVEEAEIDGEIDRDNDTVDSQQMEIDDSYLTKREKDEEEPNEEEENDDHEQSQDGEENEYEEVPVVPEVEINEEMQNNSYNSEANEEEEETEDNGDINDTVDDEENKELDPDKTYVTRTQQDFINKFRDVILQINTKKCLCCQKEYPRRKAVIQHLQKNGQKVPKHTCYNCVVTFTHIGALLSHMRANCCTDLWKIIYDENGITEDMVIEEPKSKVQAKDIFNARSYGCKLCPAKFQLKQSIMKHVSEFHEDGQSASPLGCVHCRTHFKDKTLLKKHIRVGECTVNIHCNVCSEQFSTTQEFNDHAMTVHADHFEKTENDSTNKCVDGRVTDCPLCGKKNSNYINLVKHLKMAHDEDRPHYCQNCDAKFEQAGDLNKHIYTEHSHQALGQANEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHQCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQQAHPGAGVNASGETEFFCVHCIRSFKSRQAFSNHMRIHAKVPTTNRKPNTAEPKGFDPRIIGKPIKQINLAQHVQQQPGFVNFKPNINVPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRHDSEENTMQASTEEDDFNVDENGSLLSTPQFNSFNFTNFPNNTQQQQQQQQESLPFSCELCSKKFPLKTSLWKHKRAKHGITNPGVVNETQTLSNTSSIEGGSRSSCTICKITFPDKKSYYRHRKNFHKTATQMCKLCGKPLNSTLELYEHLKAAHARELLGYNANQSTSKTQDTSQDMDGDYDNDQDAVDPSVDYQARYPCDMCGKQFVGLLALQNHQCVNQPSSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDASQLARVQHTTTTTPTSVAKRRLPPEVEVTVVNPNKKLRSDDSVEMDQQNNDAVEGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGSSSTAAPDDDALSCDVCGAQFDNEFALSSHRATSHAEDSGESDDDGNVPIAQPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICSVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -