Ibis026264.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Idaea biselata
Gene Symbol
-
Assembly
GCA_958496205.1
Location
OY292406.1:9772686-9789612[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 0.011 0.8 11.0 0.8 1 23 32 54 32 54 0.97
2 38 0.0032 0.24 12.7 0.1 1 23 58 80 58 80 0.98
3 38 0.018 1.3 10.3 0.1 2 23 86 108 85 108 0.89
4 38 0.005 0.37 12.1 5.8 1 23 114 137 114 137 0.96
5 38 0.00025 0.019 16.1 0.6 1 23 146 169 146 169 0.94
6 38 0.005 0.37 12.1 0.5 1 23 223 245 223 245 0.94
7 38 0.27 20 6.6 0.4 2 23 276 298 275 298 0.93
8 38 0.15 11 7.4 0.1 1 23 318 340 318 340 0.97
9 38 0.033 2.4 9.5 0.5 1 23 344 367 344 367 0.95
10 38 0.00023 0.017 16.3 0.6 1 23 376 399 376 399 0.97
11 38 0.044 3.2 9.1 4.2 1 23 405 428 405 428 0.96
12 38 0.033 2.4 9.5 0.9 1 23 470 492 470 492 0.96
13 38 0.022 1.6 10.0 1.7 1 23 605 627 605 627 0.97
14 38 4.6 3.4e+02 2.7 1.2 2 23 658 680 657 680 0.89
15 38 0.00097 0.071 14.3 0.6 1 23 702 724 702 724 0.98
16 38 4.8e-05 0.0035 18.4 0.5 3 23 731 751 730 751 0.97
17 38 0.00041 0.03 15.5 0.4 1 23 756 779 756 779 0.96
18 38 0.0036 0.26 12.5 0.5 1 23 785 808 785 808 0.97
19 38 0.0026 0.19 12.9 3.1 2 23 816 838 815 838 0.97
20 38 0.00019 0.014 16.5 1.7 1 23 844 866 844 866 0.98
21 38 1.3e-05 0.00097 20.2 0.8 1 23 872 894 872 894 0.97
22 38 0.07 5.2 8.4 1.2 1 23 949 971 949 971 0.94
23 38 7.3 5.4e+02 2.1 0.1 2 23 1002 1024 1001 1024 0.93
24 38 0.00012 0.0087 17.2 0.4 1 23 1046 1068 1046 1068 0.99
25 38 0.025 1.9 9.8 1.0 1 23 1072 1094 1072 1094 0.97
26 38 0.03 2.2 9.6 0.1 2 23 1100 1122 1099 1122 0.92
27 38 0.00041 0.03 15.5 1.6 1 23 1128 1151 1128 1151 0.97
28 38 0.001 0.077 14.2 0.7 1 23 1158 1181 1158 1181 0.97
29 38 0.0007 0.052 14.7 4.2 1 23 1187 1209 1187 1209 0.98
30 38 0.72 53 5.3 0.5 5 23 1326 1344 1323 1344 0.93
31 38 0.29 22 6.5 0.1 2 23 1369 1391 1368 1391 0.94
32 38 0.0061 0.45 11.8 0.0 1 23 1415 1437 1415 1437 0.98
33 38 0.0072 0.53 11.6 0.1 1 23 1441 1464 1441 1464 0.95
34 38 0.027 2 9.8 0.8 1 23 1469 1492 1469 1492 0.94
35 38 0.5 37 5.8 0.2 2 23 1499 1521 1499 1521 0.92
36 38 7.6e-05 0.0056 17.8 3.0 1 23 1528 1551 1528 1551 0.98
37 38 4.3e-06 0.00032 21.7 0.4 1 23 1557 1579 1557 1579 0.98
38 38 0.031 2.2 9.6 5.2 1 23 1585 1607 1585 1607 0.98

Sequence Information

Coding Sequence
ATGAAGCTTCACCTCGTTGATGATCATAAGATATTAATAGACGTTAGAACAGAAAACAATGAGATATTACCGTTGAAAATgactaaaaatgagtttatttgcGCATTGTGTGATAAGAAATGCGAAAATTATAGAGCTCTTAGTGGTCATATGAACATACACTATCAGAAGTATATCTGCGATCAATGCGGAGCTGGATTTATGTCTCCAGATCGCTTGCGCATCCATCGCTTGCGGCACGATTCGGGTTGCGTCCCTTGCGACGAATGCGGTAAAGTATTCCGTTCAATTTTCGCAAGAAAGGAACACTACTCGAATGTTCATATGAAAAAAGAAAGACATCATTGCCCAAAATGTCCTAAATCATTCGTCAATCACTATCAAAAATCCAAGCACATTGAAACCGTACACAATATTGCGAATAACGTTAAGGAGTTCAAATGTGATTTATGTCCAAAAGTCTACAATTCCAAGGCAAAGTTGACTGTTCATAAGAACGCGACACATTTGAAAATCAAGCGATATAGCTGCGAATTATGTACAGAGGAGGAGAAAGAAAAGCGAAGACGAGCAAAAATTAGAGAAGAGAGAAACGCGAAATGGACTCGCACCGCGAACCTATTAGAATATACTACGATTTGTCCGTTTAAATACAGAAAAAATGTATTCGCATGCCTTTACTGTGATACTAGCTTCTACGATTTGAGAGAATTGAGAGAGCATAATACCATCCATAGAGATCTGTCTCGCTCACGTATTCACAGTGCCGTAATAGCTGGATGCAGACCTGGCGATGGTTTCGTGAAAGCAGAAATCACTGATATCCAATGTAAAATTTGTAACACTTCATCGAATAGTCTAAACGATATAAAAGAACATCTGGTTAAAACCCATAATAAGAAAGTAAATTTTGATGACGATCTCATTCCATTCAAACTTTACGAAGATAAATTTATTTGCGGAGTCTGCAACGTGATCTTTCAAGCGTATAAACCTCTAACTACACATATGAATGTTCATTTTACTAAACACGTTTGCGATGTCTGTGGAGAAGGTTTTATGAATGAAATAAGATTAAAAGTCCATCATATCAGAGTGCACCAAGTAAGAAAAGATTTAGGTTCGTTTCCGTGCGAAAAGTGTGGGAAAGTTTTCTCGACTCTTTTCCTAAAAACTGATCATGTGAGGCGTGTTCACGAAAAAGAGAAGAGGTACCAATGTCCACATTGTCCTGAATGTTTTATGTACCACGTTTCTAGACTGAGGCATCTTGAATCAGCTCACGGTCCGGAcaaagaaaaacgaaaaacgGCTCAACTCAGAGAAGAGAAAAAAGCAGAGAAGGCTCGAGCGTCCTTCCTTTTCGAATTCACTACAATTTGCCCTTTCAAATTCATTAGAAATTTATTCGCATGTTTCTATTGCGATTCGAAATATCCGAAACAACAAGAATTGCGAGATCACCAATCGCTGCATcttaatttgaaaaaagaacAAATAGATGCAGCTATTACCGGTAGAGCGTACCGTCCAAAAATTATAAGAGTAGATATCTCTGATATTCGTTGCAAAATTTGTAATGCTACAGCCGAATCTATACGTGATATAAAGCAGCATCTATTTAATGAACATGATAAGACAGTAAATGTCAATGACGAAGACGGTGTTCTGCCAGTAAAAATTATGGGAAGTCCGGACGCAGAAAAACGAAAAAGGGACGAAGTCAGAGAAGAGAAAAAAGCAGAGAGGGCTCGAGCGTCCATCCTATTGGAATACACTACAATTTGTCCTTATAAATACGTTAGAAATTTATTCGCATGTTTCTATTGCGATTCGAAATATCCGAAACAACAACAGTTAAAAGATCATCAAACGTCACATcttaatataacaaaaaaacaaatagatgCAGCTATATCCGCTAAAAAGCACCGTATATTAAAATCTATAAGAGTAGATATATCTGATATACGTTGCAAAATTTGTAACACTACAGCCGAATCTATACACGATATAAAACAACACCTTTCTTTTAAACACGACAAGAAAGTAAGCTTCCATGACAATGACGGAGTTAGTCCAGTTAAAATTATGGGAAACGATTTTCAGTGTGGAATTTGCGATGCTTCGTTTCAATATTACAAAACTTTGACGACTCATTTAAGCGTTCATTACGATAATCTTAAAATATGCGACGTCTGTGGGAAAGGTTTCAGGGATAGTTACTTGTTGAGAATGCATAAGCAAAGGCACGAAGTTGGATCGTTTCCTTGTGAAGGATGTGATAAAGTTTTTACAACTTCAGTCATGAAAACAGACCACTATAACAGAGTTCACAGAAATCTCAAGAAATTTTCATGCCCAGAATGTTCGGAACAGTTTAAAGATTATATTCAGAGAACGAATCATATGATAAAGATTCACGGTATGAAACCGAAACAGATGAAGTGCCAACACTGTCCCTCTGTATTCAATCGTTCTTTCAAACTATCCAAGCATGTGAAAACAGTGCATTTGCAAACAAAACGGTTCTACTGTGAGAGATGCCCTTGGAGTTTCTATTACAAGCGAGATATGAGTAGACATATGCTAACTCATACTGGGGAAAAAAGCTTCGCTTGCAATGTATGTAACAGGACGTTTGCCGTCAAGAATACACTGACTCAGCATATGAGGCTCCACGTTCAGAGTATGAGATACAAGTGCGACTTCTgtaAACCGGTTGAAGAGAGAGTGAAGACAGAAAACGCAGAGCTCAGAAAAGAGCGTAAAGCGAAGCGAGCTCGTGCAGCTTTGATATTTCAATATACAAATATATGCCCTTTCAAACGCGTCAGAAACTCTTTCTTATGCCTTTACTGCGATACCGGTTATAATAGCGTCCAAGAATTAAGAAACCATCACATTTCACATAAAGATCTTGATAGCGCAAATATTACTGACGCCATCGCATGTTACGGAGCGTACGGAGACGAATCCATCAAAGCAGATATAACTGATATTCAATGTAAACTGTGTGATTCTCCAGCCGAAACCATAGAGCAAATGAAAATACATCTTAAGCTATATCATGACAAGAAAATTAAGCAAAAATGCGATAACGGTATCGTACCCTTTAAATTAATGGGTAACGGATATAAATGCGCGATATGTAATGTTAGTTTTGATTACTACAAATCTCTGGCTACTCATATGAATGTACATTTTACTAATCATGTTTGCGATATATGTGGACAGGGCTTCATGGCTGAGTACCGATTGAGAAAACACAAATTGCGACACGATATAAGCTCGGTGCCCTGTGATATATGCGGCAAGATATTCCAATCCTCAGTCTCGAAGACTGAACATTACTATCGCGTCCATACGGAGGGTAAAGGACATCAATGCCCAAAATGCCCAGCGTCCTTTAAAGATTACTCCCAAAAACTAACTCACATGTCAACCGTTCACGGCGTCAAAACTAAAGAATATAAATGTGAATATTGCCCAAAAGTCTTCATTCTCTCCTCTAAAAGGAACATACATACGAATTCTGTCCATTTGAATATTAAAAggttttcatgcaaattttgtGACAAGGAATTCTATCACACTACGGAGTTGAAAAATCACGTGCTGACTCATACTGGCGAGAAAAATCATGCCTGTCAAGTGTGCACAACAGATACGAAGGAAAAGACCTTAAGGCCATTATTTCAAGTGGACTATGATTGGACTCTCGGTAAACCACTTGGATCTTTCACAAACCTCAGCAGAATACGAGGAAATAAAATGAACAACAAAGCTGTAAACAGAATGAAGCTCACACCTATAGTTCTCCCAGATGCAGAATTTGACGTCAAACGTAAAGATAAACAGTTAACGAAGTCTAAATTTCGGAATATGTATGATCTCAGACAGAACGTCCTAACAGTATTTGAATTTTCGACCGCGTACCCTTTTACGGGTAAAAATAATGACATCGATTGCATTATCTGCGGAAAGAACCACAAAGATCTGGCAACTCTAAAAATACATATGGCTAGTCACGATTTTCAAGAAATGACACAattagttaagaaaagaagAGGAAAGATGTATAAAGTCGATGTCAGCGATTTGACTTGTAAAGTGTGCAATACTGCTATGAAAAATATACCAGATTTGAAAGTTCATTTGAAAGAGATTCACAAGAAAGTTATTGATACTGAAGTACAAGACAATATTGTTCCGTATAACTTAAATTTGACAAATGAGGGTTATCAATGCGCTATTTGCGGTGAAAATTTCATGCTGATGCGGGCTCTAGCAATTCACATGAACAACCATTTCAGCAATTACAGCTGTGAAGTTTGCGGCGCAGGATTTATGACACAGACTGCTATAAGAAAGCACTTGCAAGACGTTCATGAAACTGGTAACTTCCCTTGCGATCAATGTGACAAAACATATACGAATGATAGAAAGAGATCTATACATATCAAACAAGTACACCTAAAACAGTTACCGAGGAAATGTCCGATGTGTCCGGAACGGTTCGGCACTGGGTATAAGAGGATGATACACTTACAAAATGTTCACAACCAAGTGACGAGAGTATATAAATGCGAGACGTGCGGTATATCCTTCCATTTAAAATACCACCTGGTGATTCATATGAGATCTGTCCATATGCAAGAGAAGAATTTCCAATGCGATGTATGCCCTCAAGCGTTTTATAGCAAGCAGTCTTTGAAAAGGCACATGATCATTCATACGGGAGAAAGAAATTTCAAATGTCACATTTGTAGAAAAACTTTTTTCTGGAAGCGCAATTTAGTACAACATTTTAAAGTtcataataagtaa
Protein Sequence
MKLHLVDDHKILIDVRTENNEILPLKMTKNEFICALCDKKCENYRALSGHMNIHYQKYICDQCGAGFMSPDRLRIHRLRHDSGCVPCDECGKVFRSIFARKEHYSNVHMKKERHHCPKCPKSFVNHYQKSKHIETVHNIANNVKEFKCDLCPKVYNSKAKLTVHKNATHLKIKRYSCELCTEEEKEKRRRAKIREERNAKWTRTANLLEYTTICPFKYRKNVFACLYCDTSFYDLRELREHNTIHRDLSRSRIHSAVIAGCRPGDGFVKAEITDIQCKICNTSSNSLNDIKEHLVKTHNKKVNFDDDLIPFKLYEDKFICGVCNVIFQAYKPLTTHMNVHFTKHVCDVCGEGFMNEIRLKVHHIRVHQVRKDLGSFPCEKCGKVFSTLFLKTDHVRRVHEKEKRYQCPHCPECFMYHVSRLRHLESAHGPDKEKRKTAQLREEKKAEKARASFLFEFTTICPFKFIRNLFACFYCDSKYPKQQELRDHQSLHLNLKKEQIDAAITGRAYRPKIIRVDISDIRCKICNATAESIRDIKQHLFNEHDKTVNVNDEDGVLPVKIMGSPDAEKRKRDEVREEKKAERARASILLEYTTICPYKYVRNLFACFYCDSKYPKQQQLKDHQTSHLNITKKQIDAAISAKKHRILKSIRVDISDIRCKICNTTAESIHDIKQHLSFKHDKKVSFHDNDGVSPVKIMGNDFQCGICDASFQYYKTLTTHLSVHYDNLKICDVCGKGFRDSYLLRMHKQRHEVGSFPCEGCDKVFTTSVMKTDHYNRVHRNLKKFSCPECSEQFKDYIQRTNHMIKIHGMKPKQMKCQHCPSVFNRSFKLSKHVKTVHLQTKRFYCERCPWSFYYKRDMSRHMLTHTGEKSFACNVCNRTFAVKNTLTQHMRLHVQSMRYKCDFCKPVEERVKTENAELRKERKAKRARAALIFQYTNICPFKRVRNSFLCLYCDTGYNSVQELRNHHISHKDLDSANITDAIACYGAYGDESIKADITDIQCKLCDSPAETIEQMKIHLKLYHDKKIKQKCDNGIVPFKLMGNGYKCAICNVSFDYYKSLATHMNVHFTNHVCDICGQGFMAEYRLRKHKLRHDISSVPCDICGKIFQSSVSKTEHYYRVHTEGKGHQCPKCPASFKDYSQKLTHMSTVHGVKTKEYKCEYCPKVFILSSKRNIHTNSVHLNIKRFSCKFCDKEFYHTTELKNHVLTHTGEKNHACQVCTTDTKEKTLRPLFQVDYDWTLGKPLGSFTNLSRIRGNKMNNKAVNRMKLTPIVLPDAEFDVKRKDKQLTKSKFRNMYDLRQNVLTVFEFSTAYPFTGKNNDIDCIICGKNHKDLATLKIHMASHDFQEMTQLVKKRRGKMYKVDVSDLTCKVCNTAMKNIPDLKVHLKEIHKKVIDTEVQDNIVPYNLNLTNEGYQCAICGENFMLMRALAIHMNNHFSNYSCEVCGAGFMTQTAIRKHLQDVHETGNFPCDQCDKTYTNDRKRSIHIKQVHLKQLPRKCPMCPERFGTGYKRMIHLQNVHNQVTRVYKCETCGISFHLKYHLVIHMRSVHMQEKNFQCDVCPQAFYSKQSLKRHMIIHTGERNFKCHICRKTFFWKRNLVQHFKVHNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-