Ibis020295.2
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- clz9
- Assembly
- GCA_958496205.1
- Location
- OY292402.1:16387367-16389949[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-07 0.00015 22.1 0.0 5 38 18 51 14 56 0.87
Sequence Information
- Coding Sequence
- ATgccgaaaaaatatataagaaaaaaaatagtgaaatacACTGAAAAAGATGTAAATAATGCgatagaagatataaaaaatggaTTATCAAAATATGCTGCAGCTAAAAAATACTCAATACCCATATCGACACTGtacgataaaataaaacaaaattataacacAAATGTTGTTGGTAGACCGTTAGCTATCCCGTTAGAAGAAGAATATCGGTTGGTCGACGCAATTAAAACGATGGAAAAGTGGGGATTTGGTCTCTCGAGAGgcgaaattttaaatttagtagctGATTTTGTGAAGAAGAATAATTTACAAACACCGTTTATTAATTATCGCCCGGGCAAAGACTGGTTTATCAGCTTTAAAAACCGGCACAGGCTATCCATTAAAAAAGCACAGCCGGTCGAATATGTTCGAAAAAAAATGACCGATCCCTTCATTGTTTGTGATTACTTTAAACTATTACATGACACAATGATTGATTTAGACTTATTACAAAAACCACATTTAATTTGGAATATGGATGAAACTTCTGTGTGTCTCGACCCAACAAAAACAAAGGTAGTCGGCGCCATCAATAAGCCATGTTCTAGAACAACTTGTGGAACtggaaaagaaaatatttccgTGCTGACAACTGTGAATGCCAATGGTAAAAAACTAACGCCTctcattatttttaaaggaaaaaatgtaTGGGATCAATGGATGGcatcaaccgattttgatctcTCATACGCAGCAAGCGCCAAAGGATGGATGGAgtctgaaatattttataattatatggaGAAAGTTATGATTCCAGCTCTAGGTGAAGAACGTCCCGTGCTGATTATTTATGATGGTCATTCTACTCATGTAGATACAAAACTTATAGAGTTGGCCATAACGAATGATATAACTATTCTAAAACTCCCTCCTCACACTTCCCATTTATTACAGCCTCTGGATGTTTCagtttttaaatcttttaagtCAAAATGGGACAGTAAATTAGTTGAATGGCAGCGTCACAATGTTGGAATAAAAAtgccaaaaaaaactttttctgaaaCTTTTGCTAAAATTTGGCACGACACCAGCCCAGAAATCATTAAAAGTGGTTTCAAAAAAGCCGGCATTTACCCATTTAATTCTGAAGTTATATCAGAAGAGAAATATGACCCAACTGCCTATAGAAGatacaaaattgaaaaaaattctTCTCGGTACACACACTCAATTCctaaaacgctacttaaaatatgtattaactTTTTCAACGAACAGtttaacttatttgtaaattcttGTGGTCATGAACAAGATAATGTTGCAAACAGATTATattttttgactgatttatCAAAAACAGCTGAAGAAACCCGGTCTTTTACAGCAAATTCAACATCAAGTCTACCAAAGTGTCTGCAAGTTAACAGTATTGAACTAGAATCAAAGACCCGAAGTACAGTGAGTATgttaagtaatataaatacaacTTTTGAAGAGCTTCTACTTGAAAAAATACGCCAAGATAAAAAAGACAATATTAGTATTAAGAAAAAACGAATAGCCAGAGGAGCGGAAGTTATAACTGCTTCATTTTATGATAAAAAGACAAAAAGACAGACCGACAAAAATTGTGAACAAGGAGttaaaaaatccattaaaaagcaGAAAATtcacaatataaaaaacaaaaaaataaacaaaaatgatCTTACAAATCCAGTTCCATCGGGTTCtgacaaaactaaaattaaaaataagataaaatatcaacagtCAGACAGCTCTTCAACAAGTATCTCAGATATAATGAGTCTATACAGTGATTTAGAATGTGATTATGGTGACGCTGAAGGGTTTACAAAAGATTTCTGGGATGACCATAATATGAATTCACAGATAGAAGACGAATTCCAGATGCAAATAAGACAAGATAATCCCAAAAATCATAACATGGACAAAGTagcaaatataaacaaaaaagaaatagtGACCGAAGCAAGTTTAAATAGTTCAAATGAAAAGAGAATAAAAGGTAAAGGAAAAGGGAAGAAATCAAAGACTgggaaagaaaatattaatataattgaaAATGATATTCAAAAAAATGCTGAGATTGAattttttagaataaataatGATACTCAAAATAATAAGACTGAAAAAGAGAAGTTACCCAATAATAATGACAAGACTGACGGAAAAGACccaaccaaaaacaaaaaagtaattatTAAGAATGCACAATTTGAAGAAAATATAGAGAAAAATAGTGTTGAAACTACGGtggaatacaaaataaatgacaCCGTTATTGTGAGGTATTTCACCAGAAACAAATGGACCTACTATATTGgtttaatagaaaatatagatGAAGTACATGGAAACACAACTTATTATGACATTAATTTTTATAGGACAATTCGAAAGCCAAATCTCACTTTTGTATTaccgaaaaaaaataaagatcgtGACCGAGTAACGGAACTTTTAATCATTAAAAAAGTTGAATTAGTGAGAAGTATCGAAAATGACAAAGATTTTCACCTGTTGAATGAAGATAACTCAATTTATTTCTCTTTCTAA
- Protein Sequence
- MPKKYIRKKIVKYTEKDVNNAIEDIKNGLSKYAAAKKYSIPISTLYDKIKQNYNTNVVGRPLAIPLEEEYRLVDAIKTMEKWGFGLSRGEILNLVADFVKKNNLQTPFINYRPGKDWFISFKNRHRLSIKKAQPVEYVRKKMTDPFIVCDYFKLLHDTMIDLDLLQKPHLIWNMDETSVCLDPTKTKVVGAINKPCSRTTCGTGKENISVLTTVNANGKKLTPLIIFKGKNVWDQWMASTDFDLSYAASAKGWMESEIFYNYMEKVMIPALGEERPVLIIYDGHSTHVDTKLIELAITNDITILKLPPHTSHLLQPLDVSVFKSFKSKWDSKLVEWQRHNVGIKMPKKTFSETFAKIWHDTSPEIIKSGFKKAGIYPFNSEVISEEKYDPTAYRRYKIEKNSSRYTHSIPKTLLKICINFFNEQFNLFVNSCGHEQDNVANRLYFLTDLSKTAEETRSFTANSTSSLPKCLQVNSIELESKTRSTVSMLSNINTTFEELLLEKIRQDKKDNISIKKKRIARGAEVITASFYDKKTKRQTDKNCEQGVKKSIKKQKIHNIKNKKINKNDLTNPVPSGSDKTKIKNKIKYQQSDSSSTSISDIMSLYSDLECDYGDAEGFTKDFWDDHNMNSQIEDEFQMQIRQDNPKNHNMDKVANINKKEIVTEASLNSSNEKRIKGKGKGKKSKTGKENINIIENDIQKNAEIEFFRINNDTQNNKTEKEKLPNNNDKTDGKDPTKNKKVIIKNAQFEENIEKNSVETTVEYKINDTVIVRYFTRNKWTYYIGLIENIDEVHGNTTYYDINFYRTIRKPNLTFVLPKKNKDRDRVTELLIIKKVELVRSIENDKDFHLLNEDNSIYFSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00835534;
- 90% Identity
- iTF_00835534;
- 80% Identity
- iTF_00835534;