Ibis016423.1
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- clz9
- Assembly
- GCA_958496205.1
- Location
- OY292400.1:12855198-12857840[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-10 7.9e-08 32.6 0.0 3 41 16 55 14 59 0.91
Sequence Information
- Coding Sequence
- aTGGTGCGACATtatatacgaaaaaaagaaaaacaatactcACTAGACAAACTTCTTATGGCAGTTGAAGATGTTCGCAGTAAGAAAATGAATTCTTATCAAGCTGCTGATGTCTATGGCATTCCAAGATCCACAATAGTATCAAGACTGTATGAAACACATTCAACGAATGATAGAGCAGGTAGACCGACAGTGTTCTCTATCGATGTTGAAAGTAATATAGCAGAGTGTTTGCATATCATGGAAAAGAATGGGTTCCCGTTGAccagaaaagaaacaaaaattttaatatccgaaTATGTTCGTCGTAATGGCATAGTAACTCCGTTCAAAGATGACATGCCTGGAAAAGATTGGTTCCATGGATTTCAGAAAAGGCACAACCTAAGTATCAAAAAGCCCCAACCAGTTGAGATGGCCAGACGGAAAGCCTGTGATCCATTTATAGTGTACGGATATTTTGACATGCTAGAGAAGGTGATTGATGAATTAGGACTATCAGACAAACCGAAGCAAATGTATAACTTAGATGAAACCAGTTTATGTAACGACCCAGTTAAAGGGAAAGTGCTCGGTAAAAAAGGATACCaatccacaagaacaacaagTGGCCCTGGACGTAACAACACCACTGTTCTCCTAGCGATAAATGCAAATGGTGACAAAGTTCCTGCACTGATTGTTTTCCAAGGGAAACATTTGTGGTCGGAATGGGTATATAAAAACCCAAATGTAAAAACGGCATACTCTGTAAGCGAGAAGGGGTGGATGGAAACATCAATTTTTGAAAAGTATTTAAGAGAAGTATTTGTACCAGCGATTGGCAAACAGCGACCTGTGCTGCTTATATTTGATGGGCATGCTACTCATATTGATTTGAACGTTATAAAATATGCAGCATCCGAAAGAATTACAATCCTTAAATTACCACCACACTCGTCGCATATACTGCAACCATTGGATTGTAGTACGATGAAACCGCTAAAAGATCGTTGGGAAGAAAAAATAATCCAATGGCAGAGGCTACATATTGGTGTCAACCTACCAAAAGGCGAATTCGCTAGGCTTTTGACTGAAGTCTGGGATGAAATTAACCCTGTCATTCTGCAAAATGGCTTTAAAAGAACCGGGATATATCCGGTAAATAGAAACGCCATACCGAGACAATTATTTGATAATTTGACATTGCAGAAATGGGAAAATGCTCAAGCACAGCTTGTTGAAACCGACAAAGCCCAACCAGAGAATGTTATGGTACCCGATGTAATGAGCTGTGTTGAAATTACTATTATGAGCAAATCAGTTATAGTTCCAAGCTTATTATCACTAACTTTAAAAGCAATTAACGAACCAAACCAAAAAGAGAATGAAATTGAGACAGAAAATAAATATCGGAAAAGAAGTTTGGATATAAGATCATCTCAGGAGCATGTAAGACGCCCAAAAATGTCACTGCAAGAAATAGATAATAGTATGAAAATCAAACAGAGAAAAATTTTACctcaaaaatatgaaaataaaagtaatcaGCTAATTAAAGAAAACTATTCCAATGATGTACTGCACATAAAAGAAGAAACAAACACGAATCGTAGACCTGAACAAGATTCTAAATTTATACTTCAAGAGTCACAGAAAGTTTTAAAAACTTATGAAAGAATTAATAGGAAGGATACAAAGTGGTCAGACAAAAATTCAGAGAAAACAAAAACCCTTATCCAATTACAAATACCTAACAGAATTGACAGTAGTCTATTGCCAAACTCTCTTAAAATTTTGAAGTGCGAAACAATTCACCTACCGcaagaagtaaataaaaatattcaagacCCTAACATAACATTTGAAGAACTTCTATTGAAGACTGTCCGCAAAAATGATCAGCCTAAAACCcagaaaaaaaggataataaaCAGTACCGCAGAAGTTTTGACATATAACGATGTGATTCAAAGAATGACTgaagataatgaaaaaaaagagaAGATAAGACTAGACAAACTAAAAAAGAAAGAggctaaattacaaaataaagaaaataagatacaaaaaaaacaagatcaACGAAAAAAGAAACTACAACAAAGGCAACCAGGTGGTAATCAGAAGAAACAAAAACGACAGAAGAAGACATATAAAGAAAGGATCACAGATACTGATGATAGCGATAGCAGTTGTTCATACAAATCAATAAATGACTCCGAAGACGAAGATATGGAatgctattttaaaaatattttgcttgAACAGCAACTTGCAGACGACGATATGTTATCCGAAAACAAACCTTTTCCTGGTGATAGTGTAGATATGTCAGCCACTTCTTCGAAGACACAAGATCCAGGTTATAGTTTTTTCAAGACACAAGATCCAAAGAAAGACAAATTTGTATTGGTTAAATTCAGTTCAAGCAAAGGGAAGAAAACTTATAAATATGTGTGCCAGATAGAAGACATGATCAAAGAAAAAATTGTTGTACAGGGTTTcaagtcgtttaaaaaaaataaacaagttttTCGCGTTATTGATAATGACCATTCAATTATAGATAAAACCGACATTATTAGTTATCTTCCAGATCCCGAAATTAAGGGTAGTGAATATATATTTCCTTGCAAAATTGATGTTGTGGAAGCAGTGTGA
- Protein Sequence
- MVRHYIRKKEKQYSLDKLLMAVEDVRSKKMNSYQAADVYGIPRSTIVSRLYETHSTNDRAGRPTVFSIDVESNIAECLHIMEKNGFPLTRKETKILISEYVRRNGIVTPFKDDMPGKDWFHGFQKRHNLSIKKPQPVEMARRKACDPFIVYGYFDMLEKVIDELGLSDKPKQMYNLDETSLCNDPVKGKVLGKKGYQSTRTTSGPGRNNTTVLLAINANGDKVPALIVFQGKHLWSEWVYKNPNVKTAYSVSEKGWMETSIFEKYLREVFVPAIGKQRPVLLIFDGHATHIDLNVIKYAASERITILKLPPHSSHILQPLDCSTMKPLKDRWEEKIIQWQRLHIGVNLPKGEFARLLTEVWDEINPVILQNGFKRTGIYPVNRNAIPRQLFDNLTLQKWENAQAQLVETDKAQPENVMVPDVMSCVEITIMSKSVIVPSLLSLTLKAINEPNQKENEIETENKYRKRSLDIRSSQEHVRRPKMSLQEIDNSMKIKQRKILPQKYENKSNQLIKENYSNDVLHIKEETNTNRRPEQDSKFILQESQKVLKTYERINRKDTKWSDKNSEKTKTLIQLQIPNRIDSSLLPNSLKILKCETIHLPQEVNKNIQDPNITFEELLLKTVRKNDQPKTQKKRIINSTAEVLTYNDVIQRMTEDNEKKEKIRLDKLKKKEAKLQNKENKIQKKQDQRKKKLQQRQPGGNQKKQKRQKKTYKERITDTDDSDSSCSYKSINDSEDEDMECYFKNILLEQQLADDDMLSENKPFPGDSVDMSATSSKTQDPGYSFFKTQDPKKDKFVLVKFSSSKGKKTYKYVCQIEDMIKEKIVVQGFKSFKKNKQVFRVIDNDHSIIDKTDIISYLPDPEIKGSEYIFPCKIDVVEAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00835502;
- 90% Identity
- iTF_00835502;
- 80% Identity
- -