Ibis013755.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Idaea biselata
Gene Symbol
-
Assembly
GCA_958496205.1
Location
OY292398.1:28783037-28788753[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.6e-12 3.2e-09 37.1 0.0 2 41 26 65 25 68 0.91

Sequence Information

Coding Sequence
ATGGCACCTGTAAAAAAGAAACCTATGAAAAAGACACCAAAGAAACCtccaaaaagaaaattaatgaaCTATGACAGAACAAAAATCAAAGATGCTATTGAAGCCATCAAAAGTAAAAGCCTGAGTATTCAGCGTGCTTCAAGAGAGTATAATATTCCAAGGAGCACCCTTATAGATAGGTTACATGGCCGGGTCGAAGAGAATACACTTAAAATGGGTAGAGACACGGTTTTGAATGAACTCGAAGAAAAAGAACTTGTGAAATGGTTAACTCAATTAGCGAAGAGTGGATTTCCAAGAAAGAAAAGCGATTTATTAAATACTGtccaaaaaattataaaagatgATGGTAGATCTAATAATTTTAAGGACGGACGCCCCGGAGATAAATGgtacaaattgtttttaaaaagacACCCGGAGCTCAGCGAGAGGACGGCTGAGAGTATCACTGCAGCTCGAGCAGTTGTTACCGAGGAGTATATCAGAAAATGGTTTAGAGATTTAAAGACTTATTTGACTGAAACTGGTAATGAAAATATACTTTTGCATCCCAGCCGAATCCTTAATGGTGATGAAACTAGTTTTAGACTTTGCCCTCAAACAGGTAAGGTGATTGGTCCAAAAGGCTGGAAAAATATTTATGATATAAAAAGGGGCAgtgaaaaagaaacaattacCGTTTTACTGGTTTTTTCGGCATCCGGTGAAACTGCTACACCAATGGTCGTATTTCCATATTCTCGAAAACCACCGAAGGAAATTATAGAAAGTGCGCCATCAAATTGGTTTATTGGAATTTCTGAGAGTGGGTGGATGCGAAGCGACGTTTTTTTTGAATATATCGCAAACGGAGTTCACCAGTGGTTGAACGACAAAAACGTCAAAAGGCCTGTTCTTCTTCTAGTGGATGGACATAAGTCCCATTTAACAAAAGATTTGAGTAAGTTTTGCGATGATAATGGCATAATTCTTTTCGCACTTCCACCTAACACGACGCACATAATGCAGCCTGCCGACGTTAGTGTATTCAGACCGATTAAAAATCAATGGAAGAACACTGTCAAAGAATGGCAAGATGCCAacccaaacaaaaaaataaccaaagTTACCTTCTGTCCTTTGCTACACACAGTTTTACAAATGGATATTACAAACACAATCAAAAACGGATTCAGGAAGTGTGGATTATACCCCTTTAATCCAAACGCCGTTGACTATACTAAgtgtgtaaaaaatattcatgaaaATTTGTACAGAGAAAAAGAAGGCTTACCAGAagatatacatataaatataactttgaaagttttagaatattacgAAAAAGATTTGCATAACGAaggtattaatataaataaaataaagaaaattatcaaaaaagaTAGTTCTGATATTGCGATTCAAAATAAATGTCCGATTTCGGATCAAGAAGAGCTCGATAGTAATAAAACCTTACATTCAGGATCAGATTTATCTTTAAGTATACTAAACATGAAAGATATGAATAGTTCCTTGACTTGTGAAGTCGAAAACTATACTGTTAACGATGAAGGTGTTTTGGAACCGGCTCTGAAGACTTACTCAAATCAATCTACTAcgcaaaatgttgaattaacGTTCTTTCCACTGGTTGCGATGTCGTCTATAGATAATGAAATGCCTCCGAAAatattttcaccaaaaaataatttacttgccAAAATTAATCTTAACTCCGAAAGTTCAAATTCGAAAGATCTTAATTACAATATTGACGATGAAAGAGTCTCAAAACAGGTGTCACCAATTGCAGTATCAAAATATACGGATAGTTCAATGCACCAAATATCCTCTGAAGTTATTTCCtcaaataaaattgtagtaACTGCTGAAATTCATCCTAATTTGGAAAAACGTGTCAAAACACAGTCGAATGataaaaatgaatcaaaattAAGCCTCTCGACCCAACAAGATTTTGATATAATTACTACAATAAACGAAAATGATACGCCCTTTAGGCCcataaacgaaaatattttaaacagatTAGACATTGCTTCAGATTTCGATTTCTCTTTGCCAGCATCTCCAACTAATAGCATAACATCTGAAAAACTATTGACACCATCCTCCCGCAGTGTAACACCAAaatcaagtaaaataaaaagttctacTATATCACCTTCTTTTAGAAATCATTTGTTTGCgccaaaaactttaaattttacaaataaatcaagaaaaagtaaagaaaaaatgcCTCTGGCTATTTCTTCAGATGCCTGGCGAACATACATAAAGGAAAAAGATGACGAAAAAGAAACAGTAATCAAAAATCGTGAAGAACGGAAGCTGAAGATGGCAATTAAAAAAGAACAAATAGCTAAACTAAAGTTAGAAGCTTCTCAAAGAAAACAAATCACTAAGAAAAAACGAACGACAGCAAAGAGCAGAGTTGAGTTCTCTCAAAGAAAAATGAGTAGAAGTagtcaaaataatgaaaatatatacTCTATAACCGAATACTTCGCCGGTGCATATCTGTTAAGTTTTATCAAAACAGGATATGTCAGTCCGGTTCATCTGGAGAAACGGTTAAGTGGAATCATAACGAGTGATAATATTCAAATTCCGGATTACACACCTGAGGAGTGTAAATCATTCTATGAGATTCTGCAGGAAGGGTTTGATAAGGAGAGGATCACTCCTGAGGATATCGTTAGTTATTTCACTGCATTGATGTCAGAATCAAAGAACATGAAGGTTAAACCGTTGATTGAACAAGCTGCATACAGGAACCTGACTGCGCTATCCATTATAACTCAAAGTATATCAGAGTTTGCTGACTTTCCATGGATCCCCATCATGAAGAGAATGCCTGTAATTCGGGTTGAGGCCCAAAAGTTctttaatgtaataaaaatgatagcAGACAATAATTTGATCGGATATCAAATCTCCGGGACAGCTTCCTCATTTCCCAATTTGACTGGACTATGTATCCAACTTCAAattgttgttaaaaataaacacacacTCCTCGACTATAGAGGAGTTGGAAGTGTTGCCAGCATTGGAAAAATCCAATCCGATAAGTTTAAGAAGTGGGCAGAGGATTATTCCGTAAACACGAATGGATCCAAGATTGATATTAGAGAATTAATGTCTACTGATGAATTAACTTCCAAATTCCTGGAAAGTGAACATATTTCCAACGTTTTAAATACTTTCCTCTCAGACAAACAGAATTTTGTTGACGAGGAAGTGGCAGACGATGAAgattttaaatccttttttacCGGAGGGGACAATAAGGGATTGAGCACTAGAAgggatgacgatgatgatgatgacgactaCAAACCTAGTCGACCAAGAAAAATTCCGAGAGTTCGGATTCAAGAATCGGCCATAAGTGATGAGCCTCAACCAGGTCCATCGAGGGAAGCTCCTGATGTGCAGGAATCACAGGACCAATATGGTGAGGGAATGGAAACTGATGCTCCTTCTGAGACAGATACTATCACACCAACATCTGATGTTAATGAATCAACTTCCACAGGTGAACCAGAACTCAGGAAGCAACCAGCCCGACTGAAGAAGGGAAAAACAGGAACATACCTTGTTCCAACTATCCTTAAGACGAAAGTAATTGACTTAATTGGGCAAATTCATGGTGTATTCTTACATCCAGGAATTATTACTGAGAATATTACATCAGTTTCAAGCTTTACTCagattaataaagaaaaaattccACTAAAGTTGTCAGGAGCATTCTTGTCATCTTTAACTAAAAAACAAATGGAGCCAGTCTCACAGGCATCAATCCTTGTTGGATATCTCGATTCAGAGAATTATATAAGACAACTTGAATTTCCCACTTTGTTCTATGGGTCAAGATTTGATTCTGAACTAACCAGATTATGTGAGGAACAAACTATTATTGATCCCCAGGGCATCAAGAAATTCATTGTTCTTCACATCTTTATTGTAACAGAAAAGACTTCTTAA
Protein Sequence
MAPVKKKPMKKTPKKPPKRKLMNYDRTKIKDAIEAIKSKSLSIQRASREYNIPRSTLIDRLHGRVEENTLKMGRDTVLNELEEKELVKWLTQLAKSGFPRKKSDLLNTVQKIIKDDGRSNNFKDGRPGDKWYKLFLKRHPELSERTAESITAARAVVTEEYIRKWFRDLKTYLTETGNENILLHPSRILNGDETSFRLCPQTGKVIGPKGWKNIYDIKRGSEKETITVLLVFSASGETATPMVVFPYSRKPPKEIIESAPSNWFIGISESGWMRSDVFFEYIANGVHQWLNDKNVKRPVLLLVDGHKSHLTKDLSKFCDDNGIILFALPPNTTHIMQPADVSVFRPIKNQWKNTVKEWQDANPNKKITKVTFCPLLHTVLQMDITNTIKNGFRKCGLYPFNPNAVDYTKCVKNIHENLYREKEGLPEDIHINITLKVLEYYEKDLHNEGININKIKKIIKKDSSDIAIQNKCPISDQEELDSNKTLHSGSDLSLSILNMKDMNSSLTCEVENYTVNDEGVLEPALKTYSNQSTTQNVELTFFPLVAMSSIDNEMPPKIFSPKNNLLAKINLNSESSNSKDLNYNIDDERVSKQVSPIAVSKYTDSSMHQISSEVISSNKIVVTAEIHPNLEKRVKTQSNDKNESKLSLSTQQDFDIITTINENDTPFRPINENILNRLDIASDFDFSLPASPTNSITSEKLLTPSSRSVTPKSSKIKSSTISPSFRNHLFAPKTLNFTNKSRKSKEKMPLAISSDAWRTYIKEKDDEKETVIKNREERKLKMAIKKEQIAKLKLEASQRKQITKKKRTTAKSRVEFSQRKMSRSSQNNENIYSITEYFAGAYLLSFIKTGYVSPVHLEKRLSGIITSDNIQIPDYTPEECKSFYEILQEGFDKERITPEDIVSYFTALMSESKNMKVKPLIEQAAYRNLTALSIITQSISEFADFPWIPIMKRMPVIRVEAQKFFNVIKMIADNNLIGYQISGTASSFPNLTGLCIQLQIVVKNKHTLLDYRGVGSVASIGKIQSDKFKKWAEDYSVNTNGSKIDIRELMSTDELTSKFLESEHISNVLNTFLSDKQNFVDEEVADDEDFKSFFTGGDNKGLSTRRDDDDDDDDYKPSRPRKIPRVRIQESAISDEPQPGPSREAPDVQESQDQYGEGMETDAPSETDTITPTSDVNESTSTGEPELRKQPARLKKGKTGTYLVPTILKTKVIDLIGQIHGVFLHPGIITENITSVSSFTQINKEKIPLKLSGAFLSSLTKKQMEPVSQASILVGYLDSENYIRQLEFPTLFYGSRFDSELTRLCEEQTIIDPQGIKKFIVLHIFIVTEKTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-