Ibis006831.1
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- -
- Assembly
- GCA_958496205.1
- Location
- OY292395.1:22791239-22793932[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-12 1.2e-09 38.4 0.0 2 41 26 65 25 68 0.91
Sequence Information
- Coding Sequence
- ATGGCACCTGTAAAAAAGAAACCTATGAAAAAGACACCAAAGAAACCtccaaaaagaaaattaatgaaCTATGACAGAACAAAAATCAAAGATGCTATTGAAGCCATCAAAAGTAAAAGCCTGAGTATTCAGCGTGCTTCAAGAGAGTATAATATTCCAAGGAGCACCCTTATAGATAGGTTACATGGCCGGGTCGAAGAGAATACACTTAAAATGGGTAGAGACACGGTTTTGAATGAACTCGAAGAAAAAGAACTTGTGAAATGGTTAACTCAATTAGCGAAGAGTGGATTTCCAAGAAAGAAAAGCGATTTATTAAATACTGtccaaaaaattataaaagatgATGGTAGATCTAATAATTTTAAGGACGGACGCCCCGGAGATAAATGgtacaaattgtttttaaaaagacACCCGGAGCTCAGCGAGAGGACGGCTGAGAGTATCACTGCAGCTCGAGCAGTTGTTACCGAGGAGTATATCAGAAAATGGTTTAGAGATTTAAAGACTTATTTGACTGAAACTGGTAATGAAAATATACTTTTGCATCCCAGCCGAATCCTTAATGGTGATGAAACTAGTTTTAGACTTTGCCCTCAAACAGGTAAGGTGATTGGTCCAAAAGGCTGGAAAAATATTTATGATATAAAAAGGGGCAgtgaaaaagaaacaattacCGTTTTACTGGTTTTTTCGGCATCCGGTGAAACTGCTACACCAATGGTCGTATTTCCATATTCTCGAAAACCACCGAAGGAAATTATAGAAAGTGCGCCATCAAATTGGTTTATTGGAATTTCTGAGAGTGGGTGGATGCGAAGCGACGTTTTTTTTGAATATATCGCAAACGGAGTTCACCAGTGGTTGAACGACAAAAACGTCAAAAGGCCTGTTCTTCTTCTAGTGGATGGACATAAGTCCCATTTAACAAAAGATTTGAGTAAGTTTTGCGATGATAATGGCATAATTCTTTTCGCACTTCCACCTAACACGACGCACATAATGCAGCCTGCCGACGTTAGTGTATTCAGACCGATTAAAAATCAATGGAAGAACACTGTCAAAGAATGGCAAGATGCCAacccaaacaaaaaaataaccaaagTTACCTTCTGTCCTTTGCTACACACAGTTTTACAAATGGATATTACAAACACAATCAAAAACGGATTCAGGAAGTGTGGATTATACCCCTTTAATCCAAACGCCGTTGACTATACTAAgtgtgtaaaaaatattcaagaaaATTTGTACAGAGAAAAAGAAGGCTTACCAGAagatatacatataaatataactttgaaagttttagaatattacgAAAAAGATTTGCATAACGAagATGCCTGGCGAACATACATAAAGGAAAAAGATGACGAAAAAGAAACAGTAATCAAAAATCGTGAAGAACGGAAGCTGAAGATGGCAATTAAAAAAGAACAAATAGCTAAACTAAAGTTAGAAGCTTCTCAAAGAAAACAAATCACTAAGAAAAAACGAACGACAGCAAAGAGCAGAGTTGAGTTCTCTCAAAGAAAAATGAGTAGAAGTagtcaaaataatgaaaatatatacGTACGTAATGCAACTCAATGTGCTGGTTGTGATGAAGAGTTAATAAGTGACGTGGAGGAtgataacttaaaaaatattggcTGTGACATTTGTCCTAAGTGGTTTCATTTACAATGTACCGCCAAGCGCAACAAACACTATAAAGATGTGGCCAATGAAGAGTTTATTTGTCACCATTGCCTTGTAcacttattgtaa
- Protein Sequence
- MAPVKKKPMKKTPKKPPKRKLMNYDRTKIKDAIEAIKSKSLSIQRASREYNIPRSTLIDRLHGRVEENTLKMGRDTVLNELEEKELVKWLTQLAKSGFPRKKSDLLNTVQKIIKDDGRSNNFKDGRPGDKWYKLFLKRHPELSERTAESITAARAVVTEEYIRKWFRDLKTYLTETGNENILLHPSRILNGDETSFRLCPQTGKVIGPKGWKNIYDIKRGSEKETITVLLVFSASGETATPMVVFPYSRKPPKEIIESAPSNWFIGISESGWMRSDVFFEYIANGVHQWLNDKNVKRPVLLLVDGHKSHLTKDLSKFCDDNGIILFALPPNTTHIMQPADVSVFRPIKNQWKNTVKEWQDANPNKKITKVTFCPLLHTVLQMDITNTIKNGFRKCGLYPFNPNAVDYTKCVKNIQENLYREKEGLPEDIHINITLKVLEYYEKDLHNEDAWRTYIKEKDDEKETVIKNREERKLKMAIKKEQIAKLKLEASQRKQITKKKRTTAKSRVEFSQRKMSRSSQNNENIYVRNATQCAGCDEELISDVEDDNLKNIGCDICPKWFHLQCTAKRNKHYKDVANEEFICHHCLVHLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00835479;
- 90% Identity
- iTF_00835479;
- 80% Identity
- iTF_00835479;