Ibis020126.1
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- -
- Assembly
- GCA_958496205.1
- Location
- OY292402.1:15782382-15783575[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-14 3.5e-11 43.3 0.0 2 43 47 88 46 90 0.94 2 2 0.41 1.5e+02 2.9 0.0 25 44 145 165 145 165 0.92
Sequence Information
- Coding Sequence
- ATGCAAGACAAGTGTACACCAAATGTTACAATAGACACTTTGCAATACAATGGGAATAATGAGTCAAACGATACAACAGGCGATACGCAGGTGGGGATAGCAAAGAAAAGCATAAGCAGACGTCTATTTAATTACGGGCACGAAAACCTGAACAAAGCTATAGaagcaattaaaaataaaagcatgGGCCTAAGGGAAGCATGTCGGGTCTACGGCGTTCCAAAAACAACGGTACATGATAGACTTTCAGGAAAAATTTCATCCGACCGAATGCCAAAAGTAGGCCCAGATCCAGTTTTAGGTCGTGAAGGTGAAGAAAAAGTAAAACACTGGGTGTTAGATATGGCCAGATGTGGGTTACCTGTTCAAAAGAAAGATCTTCTCGATAGTGTATCGAAAATTATCAAAGATACGGgcaaaaaaaatccatttaagcATGGCATTCCGGGAGATACGTGGTATAAAGCTTTTTTGAAACGCCATCCGGAAGTGAGCGTTCGTGAACCTGAGGGTTTTAATAACGCCAGAGCGGCAGTCACTGAAACACGGATACGATGCTGGTTTAATGATTTGAAAGAATATGTTAAATCCATAGATTGTCTAGATATATTTGACAACCCAAATAGAATATTTAATGGAGATGAAACCGGCTTTGCACTTTGCCCCAAAAGTGGCAAAGTTTTGGGGCCCAAAGGCTTTAAAAACCTttacatcattaaaaaaaataatgaaaaagagAAAATAACTGTTTTAGTTATGTTCTCAGCAACCGGAAAGATTTGCCCTCCTCTGGTAGCCTTTCCTTACGTAAGACCTCCCAAGGCTTTAGTCGATAGCATGCCTGAGGAATGGGTACTTGGGAGGTCCGAGAGTGGATGGATGAGGAGTGATGTGTTTTTCGAATACATTTGCAACACATTTGCATTTGAGCAAAATTGA
- Protein Sequence
- MQDKCTPNVTIDTLQYNGNNESNDTTGDTQVGIAKKSISRRLFNYGHENLNKAIEAIKNKSMGLREACRVYGVPKTTVHDRLSGKISSDRMPKVGPDPVLGREGEEKVKHWVLDMARCGLPVQKKDLLDSVSKIIKDTGKKNPFKHGIPGDTWYKAFLKRHPEVSVREPEGFNNARAAVTETRIRCWFNDLKEYVKSIDCLDIFDNPNRIFNGDETGFALCPKSGKVLGPKGFKNLYIIKKNNEKEKITVLVMFSATGKICPPLVAFPYVRPPKALVDSMPEEWVLGRSESGWMRSDVFFEYICNTFAFEQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -