Ibis000593.1
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- -
- Assembly
- GCA_958496205.1
- Location
- CAUEGO010000144.1:83-5568[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-10 7e-08 32.8 0.0 4 39 180 215 177 220 0.88 2 2 1.1e-05 0.0042 17.5 0.3 2 27 232 257 231 257 0.94
Sequence Information
- Coding Sequence
- ATGCTTGGGCACGGTGGTGCCGTCCATGTGAAATGCGAGCCGCCGTCCGATGAAGAAGACAATCCGCCGCAACTAGCTGATTTGTTTCTtactaagctCTCTTCTGGATATACATCAGTCAATACTGTGAAATCACCATCTAATCAAGATGATGAAGGGCATAATGCTGCTTTAATGCAACAGTTGCAcCAATCCTCTCGGCTGGAGGAGCTGGCTCCACTGACGCCAGCCGCACCGTCTGCGACGCCGGTGTGCGTGAAGACAGAGCCTGGCACGGGAGACACCTCACTAATGCTCGAAACACTTCAGTCTACGCCTCATATCACGGGTTCATTTCTCTTAGAAAGACATCTGGCTATGCTAAGTTCGACACGGCTTACAGATTCTGCAGACTTTTTGCCTTTACAAACCGTCAAAGACGAGCCGTCATCAGAAGGAGAAGCACAGGCTTTGAGCAGCGACGAAGCGAGCGACTCGTGTGGCGTCTCGGAAGCAAGTGCAAGCGCTCGCGGCAGTCCCAAGGGATGGTCGCAGGCCGACATGGAGGGAGCGCTCGACGCCTTGAAGAACCATCACATGAGTCTTACTAAGGCGTCATCTCGTTACGGCATCCCGTCGACGACGCTGTGGCAGCGCGCGCGGCGGCTCGGCATCGACACGCCCAAGAAGGAGGGCGCGCCCAAGAGTTGGAGCGACGCGGACTTGCGCGCCGCGCTGCAGGCGCTGCGCCATGGCTCGCTCTCTGCCAACAAGGCGAGCAAGGCCTATGGTGAGATATATTTAGACtaa
- Protein Sequence
- MLGHGGAVHVKCEPPSDEEDNPPQLADLFLTKLSSGYTSVNTVKSPSNQDDEGHNAALMQQLHQSSRLEELAPLTPAAPSATPVCVKTEPGTGDTSLMLETLQSTPHITGSFLLERHLAMLSSTRLTDSADFLPLQTVKDEPSSEGEAQALSSDEASDSCGVSEASASARGSPKGWSQADMEGALDALKNHHMSLTKASSRYGIPSTTLWQRARRLGIDTPKKEGAPKSWSDADLRAALQALRHGSLSANKASKAYGEIYLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -