Basic Information

Insect: Idaea biselata
Gene Symbol: -
Assembly: GCA_958496205.1
Location: OY292400.1:1836560-1840424[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 5e-10 1.9e-07 31.4 0.0 1 39 9 47 9 51 0.91

2 2 8.9e-10 3.3e-07 30.6 0.0 1 36 360 396 360 402 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	5e-10	1.9e-07	31.4	0.0	1	39	9	47	9	51	0.91
2	2	8.9e-10	3.3e-07	30.6	0.0	1	36	360	396	360	402	0.92

Sequence Information

Coding Sequence: ATGAAGAGAAGGCGAAATCAATATActgaagaaaatctgaaacgtgCCATAGATTTGATATGCGATAAAAGAGTCTCAGTAAGAAAGGCCGCGAAACTCTTTCAGATACCAAGATCAAGTTTACAGTTACGGatccaaaataaaaatgccCCTAGAACCTCTGTGTTATCCGATGTAGAAGAAGCTGAGCTTATAGATTTCATGAACGAAATATCTAGGAGAGGGTTTCCACGCAAGAAGGAGGATATCCAGTCATGCGTTGAGGACTTCTTGAATGCCCGCCCACGTTCAAACCAGTTTATTGATAACCGCCCAGGACAAAGCTGGTACTTCGGATTCCTAAAGCGTGTTAAAGAACATCTTAACGAATCTGTTAAAGTTACCAATTGCAAAACGAATGAAGATACTCACATGTGGTTTAACGCCATCAACAAATACGTTATGGAAGAAAATCTTTTCGATGTCTTTGACGATCCTAGTAGAGTATTAATGATTGATCAAACAACATTTGACATTTGTGCCTGTACTGGCAACGTGTATGTCGAAGGAACTTGCCCAGCTGGCTTGAGTAAAGCAGTTGAAAAGATAACTGTTATTTTCTCGTTCGCTTCCAATGGAGCCTATTGTAATCCGATGATTGTATACCCCTTCAGGAAGGTTCCAGATAGGATAGCTGATGGTGTTCCAATTGGTTGGAGTTTTGGCAGGAATGAAACCGGAACAATGACGGCCCAAATTCTTTACGAATACATAACTAACGTATTATATACGAAACTGTTGGAAGATGACGTTCAATTACCTGTCATTCTTTTCGTAGACGGGCAAAAAACTCACGTTACCATCGATCTTCTCGAAATGTCTAAAGATCTCCAAATTCATCTGATAGCCATCTACAGTAATGTAAAAGATATCTTATCTGCCGGTGACTTAGCTCTGACTCGTCCGATAAAAACTTCTTGGATAAAGGCACTAAAGTATTGGTTCAAAGAGAAGAAACAGGAACCGAATGCTAACAAGTTGACCTTTGCTCCTTTCTTGCAAGaTAATCGCCCTGGAGCAGCAAAGCATAAACCATATACAGAAGAGAAATTACATAAAGCTCTTGAATTTATACGCAATAAGGAAGGTTCGGTAAGAAAAGCGTCGATAGTATTTGATATACCACGGAGCAGTATCCATTTCAGATTGAATAACCCAGATATAAACAAAAAAGCGCCTAAACCCAAACCCAAGATTCTAACGGACGCTGAAGAAGCTGAACTTGTATCCCTCATGAATGATATGTCTAGAAGAGGATTTCCGCGGAAGAAGGAGGATATAAAGTCATTTGCTGAGGACTATCTTAAAGCTTCACCTTGTTATGATTCATTTCCCAACAACCGCCCGGGTGATACCTGGTACAACAAGTTTGTAAGCCGCCACAAAAGTGCTCTTAGTAACGTTGATGTATCATTTTGTAACTCTGCATACGATATTGAAGTGTGGTTTAAAGTTATTGACAAATACTTTCGGGAAGAAAATCTTTCCGATGTCATCAACGATTGGAGTAGAGTATTCATGCTTGACCAGACTACATTTAATGTCTGCGCAACTACTGGCAATATATACGTCGAAGAAACTTGCCACGCGAGAATCGAAAAGTCTGCTGAAAAGACAACGGTTATATACCCGTTCGCGGCTACTGGGAATTATTGTAATCCTATGATTATATATCCACTCAATAAAGTTTCGGATACAATAGGTGAAGGTGTTCCTGCGGGCTGGAACTTTGCTAGAAATGAGACCGGTACAATGACAGCCGATGTGCTGCACGAATACATCACTGATGTATTTTATACCAAATTGCAGCAACTTAAAATTCAACTGCCTGTCATACTTTTTGTGGATGGTCAAAAGACTAACGTCAACATTGAAGTTTTTAATGTGTgtaagaaattaaatatacatttGATAGCCATCTACAgcaatttaaaacatattttaactgaCGCCAATCTGGCTCTGACTCGTCCTATACGATCAGCTTGGACTAAGGCATATCAAAAAAGGCTTAACAAAGAGGAACAAGATCCAATTCCTAATCTTTCACGTTTTGCGCAATCATTGCGCCAAATAATTACAGAACACGTCGATAGTGTTAACTTGAGGAAATGCTTCTCCGTCACTGGATTGCAGCCTTTCGACTACAGTAACATTGTCGAATGTAGGCCAGAAGAAAACGATTCgtag
Protein Sequence: MKRRRNQYTEENLKRAIDLICDKRVSVRKAAKLFQIPRSSLQLRIQNKNAPRTSVLSDVEEAELIDFMNEISRRGFPRKKEDIQSCVEDFLNARPRSNQFIDNRPGQSWYFGFLKRVKEHLNESVKVTNCKTNEDTHMWFNAINKYVMEENLFDVFDDPSRVLMIDQTTFDICACTGNVYVEGTCPAGLSKAVEKITVIFSFASNGAYCNPMIVYPFRKVPDRIADGVPIGWSFGRNETGTMTAQILYEYITNVLYTKLLEDDVQLPVILFVDGQKTHVTIDLLEMSKDLQIHLIAIYSNVKDILSAGDLALTRPIKTSWIKALKYWFKEKKQEPNANKLTFAPFLQDNRPGAAKHKPYTEEKLHKALEFIRNKEGSVRKASIVFDIPRSSIHFRLNNPDINKKAPKPKPKILTDAEEAELVSLMNDMSRRGFPRKKEDIKSFAEDYLKASPCYDSFPNNRPGDTWYNKFVSRHKSALSNVDVSFCNSAYDIEVWFKVIDKYFREENLSDVINDWSRVFMLDQTTFNVCATTGNIYVEETCHARIEKSAEKTTVIYPFAATGNYCNPMIIYPLNKVSDTIGEGVPAGWNFARNETGTMTADVLHEYITDVFYTKLQQLKIQLPVILFVDGQKTNVNIEVFNVCKKLNIHLIAIYSNLKHILTDANLALTRPIRSAWTKAYQKRLNKEEQDPIPNLSRFAQSLRQIITEHVDSVNLRKCFSVTGLQPFDYSNIVECRPEENDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -