Basic Information

Gene Symbol
ECM5
Assembly
GCA_958496205.1
Location
OY292394.1:22460399-22467023[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-19 1.4e-15 58.2 0.0 6 89 358 441 354 441 0.91

Sequence Information

Coding Sequence
ATGCTTGACCGTTCTCGTGCACGCAGACGTACGGCTACTGCATCGACTTCATTTGACCCTGTTATGCAGTTCCTGGTACCCAGACCTCGGCGCACACGAACCGGGGTCTCTACAAGGCCTACCCAGCCAGTACGTTGCGCATGTGGCAATGGGTACAGTGGGAGTTGCGAACGGTGCCCCATCTTAAGCAGCGTGATCGCAATGGGCAACACGGAGCAATGCCCAGACGATGTAGTTGAGCGTGCAGTTGCCGATTGGGTTGACCGCACCCAGCGATCGCCTTCGGTTCGGTTGCCCGCCGGCCCCGCCCACGCTGATGTGTATGCATTCAACGAAGAAACTGAGGTTGCAGCCAAGCCTAGTTCATTCCGCACGGCGAGACCGACTCCACCTCCTGACACCTCTCAACCTGGCCATTCTACCTCCTTCAACCCTGAAGATCTGAATCACGCTATCGATTCTGCTGACATGATTCGACTTCTTAAAACTCAATCCAAAGTCCTTGACTCCTATCTGCTCGAACATAAAGGCAGCACGCATCCCATGGATAGACGATTGAGAAAATTATCACAAATCCTTGAGAACTGTATGGCACAACTGACTTTGAATGAACATCTTCAGGCAGAATCTTCAGAAGTCATAGTcattgatgatgataatgatgtaCCTAAAATAGAGTCGTTGGAGGAGGGAGAAGGTGTTAATGGCCAAGAAGCCAACGAAGCGGCCCCATCCAACCAAGAGGCCCCATCCAACCAAAAGGCCCCATCCAATCAAGAATCTATGATATCAGACTTTATAATGTTCAATAACACGTCGCTTCCACTTGAAGACAATACCGACGGCCCTGATATTGCGGAAGCGCCATCTTTCTATCCGACTAGGGAGGAAATGGAGGACCTTAACACTTACGTCGAAAAAGTAGAGCCTGTTGCTCGTAAATACGGAATCTTCAAGATAGTGCCACCCAGGGACTTCCAACCGCCATGCCACTTGAAGAACGTTAAGTTTAAGTGCACAAACCAATACATTTCGTCGATGTTTTCGCGCTGGGGCCCAAATACCAGTGAGATGACTGTCATTAAAGCTCACTTAGCAACTCAAAACGTTGCCTTTAACCGTCCGCCTCTGTTCGAGGGCGTCGAAGTCGATATAGTCAAGCTATTCCAATTGGTACAAGATCATGGTGGACTAATCCGCGTCATGGGGGAACGCAAATGGGACACTATTGCCCAAAAAATGAACATGAAAACGCGCGCCGGTCGGTGTAATGCTGAAAAAATGTTAGACAAAGTATACATGAAACACTTGCTGCCTTATGAACCGTTGTCCGAAAAAGATCGGAGGACACTTCGCAAACGCGTGGCGACCGCGTGGCAAAAGAGATACGACCGGCAACGCGCACGGGCCAATCGCCCTCTTCATCGTCAGCGTCGATTACTCGGCGAATCTGAATCTTCCGAGGAGGAAGACGCCGAATCTCACGGCTTAGAGAGCTCCTTTCTCGAAGTCGACGACTGCGTCGTTCCAGGCTCTACTATGAACTTCCAACGGTTCAAACTTGTGGGTGACCGCGTTCGAGACTTGCGTTTTCCGGAGGCAAGCGCAGTCACGCCGCCGCACTGGGCGGCAGTGGAACAGGAATATTGGCAGCTCGTTGGCACTGGTACTGAGCATGTCTGTGTCAATGGTGCCGCGCTTGATACGTCACAGGATGCGCTGGGTTTCCCCGCTGCTTCTGATGGGCCATCATATGGCAATCATCCTTGGAATCTCAAGCGTTTGGGCGAGAGCAACCGCAACGTGCTAAGCTCGTTGGGCCCGACTCTGGCGGTGACGATCCCGACTTTGCACGTCGGCATGATGTTTAGCACCAATTGTTGGCATCACGACCCGCATCACTTGCCCTGGACCGAGTACATGCACCAAGGTCCACCTAAGATCTGGTATGGCATCGCTGATTCCGAGAGCGCTCCGTTCCGAGCGGCGGTCGAGCGCCTATGTCCTACAGCAGTGCAAGCGAAGGGGCTGTGGCTTCCATCGGACACGGTGATGTTGCCTCCGCGGGTGCTGGCTACCAACGGCGTGCGCCTAGTACGCGCATTACAAGCACCTGGCGAATATGTGGTTGTATTACCGGGCGCGTACAGCTGCTCGATCAGCACCGGATTTACTGTTTCCGAGAGCTTGTACTTTGCGGGTGATAAGTGGCTTGACGATGTTGGCGATGTGTTCGCTAAGCTTCGCTCCGACGCCGAGCCGAGTATGTTCGCGCTCGAAGCATTACTTGAAGGCATAGTGCGGGACACGACCGCGCCACTTTCACGCTTAAAGCGTGCCCATATGGTTTTACAACCGCTCCTACAAGCCGAATTGACTCAACGAGATAGTGCGACCGCAAAAGGTGTGCGGGCACTTTCCCCAAATGAATTCCTGAGAGAGAATCGCCGCTGCTCCAGAACGTCGTGGCAACTTGCCCGCGACGAGTGCCACGTTTGCCGCACGACGCTGTATTGGTCCAAGATAATTGATACGTCAACGCGCATGTCAGTGTGCCTCGAGCACGGCCTCAAATTGGTTGGAAATCCGCAGTCCGCCGCTGCGCCGTATACCGGACGATTTATCGTGATTTTATTCCACGCCAAACATAAATTACTTAGACTCCTTTCCGATATGGATAAATTTAATTTCGACAAGTAG
Protein Sequence
MLDRSRARRRTATASTSFDPVMQFLVPRPRRTRTGVSTRPTQPVRCACGNGYSGSCERCPILSSVIAMGNTEQCPDDVVERAVADWVDRTQRSPSVRLPAGPAHADVYAFNEETEVAAKPSSFRTARPTPPPDTSQPGHSTSFNPEDLNHAIDSADMIRLLKTQSKVLDSYLLEHKGSTHPMDRRLRKLSQILENCMAQLTLNEHLQAESSEVIVIDDDNDVPKIESLEEGEGVNGQEANEAAPSNQEAPSNQKAPSNQESMISDFIMFNNTSLPLEDNTDGPDIAEAPSFYPTREEMEDLNTYVEKVEPVARKYGIFKIVPPRDFQPPCHLKNVKFKCTNQYISSMFSRWGPNTSEMTVIKAHLATQNVAFNRPPLFEGVEVDIVKLFQLVQDHGGLIRVMGERKWDTIAQKMNMKTRAGRCNAEKMLDKVYMKHLLPYEPLSEKDRRTLRKRVATAWQKRYDRQRARANRPLHRQRRLLGESESSEEEDAESHGLESSFLEVDDCVVPGSTMNFQRFKLVGDRVRDLRFPEASAVTPPHWAAVEQEYWQLVGTGTEHVCVNGAALDTSQDALGFPAASDGPSYGNHPWNLKRLGESNRNVLSSLGPTLAVTIPTLHVGMMFSTNCWHHDPHHLPWTEYMHQGPPKIWYGIADSESAPFRAAVERLCPTAVQAKGLWLPSDTVMLPPRVLATNGVRLVRALQAPGEYVVVLPGAYSCSISTGFTVSESLYFAGDKWLDDVGDVFAKLRSDAEPSMFALEALLEGIVRDTTAPLSRLKRAHMVLQPLLQAELTQRDSATAKGVRALSPNEFLRENRRCSRTSWQLARDECHVCRTTLYWSKIIDTSTRMSVCLEHGLKLVGNPQSAAAPYTGRFIVILFHAKHKLLRLLSDMDKFNFDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-