Basic Information

Gene Symbol
pnr
Assembly
GCA_907269075.1
Location
OU026084.1:16911543-16916907[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.8e-18 2.2e-14 53.3 4.1 1 35 72 105 72 106 0.97
2 2 2.1e-18 9.9e-15 54.5 6.0 1 34 126 158 126 160 0.98

Sequence Information

Coding Sequence
ATGGATACACTACAGATGCAAAATTGGTTGCAGAACATAGCCCTGCTCGCTCGCGTCGGAGCCGCCGGTGGTCCCGTGGGCGGCATGGGCTCGGTGGGGGCCGGCCTGTACCCCCAGAACGTGGTGATGGGTTCGTGGTGCGCGCCCTACGACGCCTTGCAGCGACCGCCTGCATATGATGGTGTCCTGGAGACGTACGAGGAAGGTCGCGAGTGTGTGAACTGCGGCGCGAACAACACGCCGCTGTGGCGCCGCGACTCGACCGGGCACTACCTGTGCAACGCGTGCGGACTCTACCACAAGATCAACGGCGTGAACCGTCCGCTGGTGAAGCCGAGCAAACGGCTGTCAGCGGCGCGACGTCACGGCCAGTGTTGCACGAACTGCGGGTCGCGCAACACGACCCTGTGGCGACGCAACAACGATGGCGAGCCGGTCTGTAACGCGTGCGGACTATACTACAAGCTACACGGCATTAACAGGCCCCTGGCGATGAGGAAAGACGGTATCCAGACCAGGAAACGCAAGCCTAAGAAGTCTGGTAACGGAAGTAAACCTCCACAAGACGCGGTCAAGAAGGACGGACACAGCTCACCTGGAATCGACGATTCGAAGTCGAGTATATCGGAGGTGTCGCTGAGCCACCGCGAGCGGACGCGCGTGTCCCCCGAGCCGGTGGCGCAGTACCCCCCGACGACGGCGGCGGTGGCTCCCTTCCTCCACAACACCTCGCTGTTCAACATAAAGAGCGAGCCGGCGACCGTCGCGCCGCAGTACGACGCCTACTCCGCACAACACAACCACCACTACCACTCGCAGCAACACTATCTGCACGCGTTACAGTACGGTCTCGGCGGTGGCGAGGAGGAAGAAGGTAGCGGGTTTCTGCACCAGCGCAATGTGACGGCGCACGCCAAGCTCATGGCGTCCACGTAG
Protein Sequence
MDTLQMQNWLQNIALLARVGAAGGPVGGMGSVGAGLYPQNVVMGSWCAPYDALQRPPAYDGVLETYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGSKPPQDAVKKDGHSSPGIDDSKSSISEVSLSHRERTRVSPEPVAQYPPTTAAVAPFLHNTSLFNIKSEPATVAPQYDAYSAQHNHHYHSQQHYLHALQYGLGGGEEEEGSGFLHQRNVTAHAKLMAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00838092; iTF_00837136;
90% Identity
iTF_00838092;
80% Identity
-