Iave003835.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- -
- Assembly
- GCA_907269075.1
- Location
- OU026109.1:7736279-7739445[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00016 0.013 16.6 2.3 1 23 355 377 355 377 0.98 2 11 4.4 3.5e+02 2.6 0.1 5 14 434 443 432 447 0.85 3 11 0.013 0.99 10.6 6.8 1 23 460 482 460 483 0.96 4 11 0.0016 0.13 13.4 2.7 1 23 487 509 487 509 0.98 5 11 0.0024 0.19 12.9 0.2 2 23 531 553 530 553 0.95 6 11 0.016 1.2 10.3 0.1 2 23 604 626 603 626 0.95 7 11 0.00025 0.02 15.9 3.2 1 23 636 658 636 659 0.96 8 11 0.0039 0.3 12.2 1.5 2 23 675 696 674 696 0.96 9 11 0.038 3 9.1 1.4 1 23 702 724 702 724 0.95 10 11 0.93 73 4.7 4.5 1 22 730 751 730 754 0.90 11 11 0.00014 0.011 16.8 0.1 1 23 802 824 802 824 0.98
Sequence Information
- Coding Sequence
- ATGGACACAACAGAAACATCCCAATTTTCTGTCAAAGAAGAACTAACCATCGTAGAAGAAGAACTAAACATTGCAATAAAAAATGAAATAGAAGATGAGCAAGTTGAAGACCCTTTCAACAATATTTCAATTGAAGTCAAACAGGATTTTATTCAAAACCAACAAGATGAAATAAACAATGCTATCCATGTACATGCTCAAAATATTGAACATGAAATAAATGCAACTCAAGCATACAATCAAAATATTGAAAATGATAATTTAGCAAACGTAACATCAAATCACCCAGACGCTGATAAAGATCAAGATTTTGAACAGATTCAAGAAAATAATTTAAAAATAGAAATTGAAGAGCAAACAACAGAAAATGATCCATACATACATAATATTCATTCAGACATTGAAAAAGATAATATGAAAACAGAAATTGACGACCAAAATATTGACATACACACTGAAAAAGATAATTTAACAACAGATATTGATGAAGAAACAGAAATAAAAGAAGAATCAGAATCGATACTACCAACAAATGATGATAAAATGAAAGAAGAACAACTAAATGATGGTGATAATGATATGGATCTTCTAACGTATGAGTATCCCAGTTTTGATGACAGTATGGATAGTAGTGATGCCGCTGCACTGTTTCAGGTTGAAGCTTGTTTAAGTGAGGAGACAATTAAACCTGATCGAGATTTTGATGAAAAACAAGACAATCAACCGAAAATAATTAAAGACGAAACAGATTTAACAGTAACGGAAACACATATAATATCGAACAAAGTGATTAACACAACATCAACACTAACAAATACTCACGATGGCATCATACAATCCCAAACAACCCAGACGTTAGTCATGCAAATACAGCCGGTCTCACAGAACATGAGCCTAGGACAGCCCGAAGAAATATTACCAACGAACAATGACAATTATGTAATTGAAAATTACGGAGAATCATTTCAACTTAATTCAATAACCGGTAACTTCTTATCATTAGAACAAGAAGCCTATGGTCTCTTACAAAAGAAGAAGCAAAAACAAATAACAAATAAACTATATCGATGTAATAAGTGCTCGAAAACTTATGCACAAAAACGAGGTATGGTACGGCATTATAAAATTCACGATGAAATAGAACGGAGGGAACTGGGCATTATCAAAGGTTTGAAAACAAAACAGGATAAAAAAGATAAATTAATAAAAGATGCGAAAATAAAGATTAAAAAGGAAGTTAAACAGGAAGTTGTAAAAAAGGAAATTGTTGAGAAACAAAGAAAGGAGGGTTATCCGTGCACTTGTGGACAAGTATTCAGAAGGAATAGTAGAATGGAAACTTGTTTGAAATCACATACTTACTTCTCAGACATTGACTTCAAATGCTCATCATGCGACAAAAAGTTTAAAACGGACCAAGAACTAATTTATCATCGTAACCACCATCATCGAAAGAGGTATCCTTGCAAATTCTGTCCGACAAATTACCACACTCAGAAAGCTCTTTTCAAACATTTACAAATACATCAGCAAGTCCAATTAACTGAATTCAAAGTCATAATAGAAGTAAATCAAGGAAAAATAGACTTGAACTGTTTAATTTGTAAAAAAACTAGTGCAACATTACCTGAATTGAAAAACCATATAATGAAAGATCATAAAGAGCCTTACAATTGTAAATACTGCAAGAAACAAACGTTTCCAAAACTCACAGAGTTTATCGATCATTTTAAAAAGTGCCATCTGGATATTGGGAACCAATCGTTACTAGAAGTGATCGAAGCTTTTTCAAAATTGGTTAAGGCATGGAAATGTGATAGCTGTGGGTTACAGTTTTATGAGGCTGATAAATTGGCGATACATCAAATGAATGATCATACTCAAGATATGAAGAACGAACAGCATTTCCAGTGTGAAGACTGTCAAAGAGTCTTTGTAAGTATTCAAGGATTGCACTCCCATAGACGAATGCATCATAGACCAGAAGAAACTGAACCGACAGAGCCCGAAGAAGTTGGGGTTATGTGTTTAGAATGCAGGAAAATATGTAAAGATATGACTGCATTAACATCACATATGAGACTGCATTCCATGGATAGAAAATACCCTTGCAAATTCTGCGATTTCCGCTTCGCGACGCCTCAAAAACGAAAAACCCACTCAGAAATACATACTGGCGACATGAAATATGTCTGCTTCATATGCGAATATCAATGTAGCTCCGAAAATCGATTGAAACACCACAAAATGTCAATAAAACATTTAAATATGAAAGAGTATCTATTGACAGGCAAACCTTTAATAGAAGAAGAGCCCACGAAAAAAGAAAAGGACAGAAAAAAAGATAGCGTTAAAAAGAAAAAGAAAGATAAAAAAGATAGAGAGGTGAATTTGGAAAATTTTTTCGTTTGTGATATTTGTGGGGAGAGATTTGAATCAGAAGATGCGATGAGGGAACACAAACTGACGCATCCTTTTATTGAATTCCCTAATGAGGAGAACCCTTCGAGAATATTTTTTAAGTAA
- Protein Sequence
- MDTTETSQFSVKEELTIVEEELNIAIKNEIEDEQVEDPFNNISIEVKQDFIQNQQDEINNAIHVHAQNIEHEINATQAYNQNIENDNLANVTSNHPDADKDQDFEQIQENNLKIEIEEQTTENDPYIHNIHSDIEKDNMKTEIDDQNIDIHTEKDNLTTDIDEETEIKEESESILPTNDDKMKEEQLNDGDNDMDLLTYEYPSFDDSMDSSDAAALFQVEACLSEETIKPDRDFDEKQDNQPKIIKDETDLTVTETHIISNKVINTTSTLTNTHDGIIQSQTTQTLVMQIQPVSQNMSLGQPEEILPTNNDNYVIENYGESFQLNSITGNFLSLEQEAYGLLQKKKQKQITNKLYRCNKCSKTYAQKRGMVRHYKIHDEIERRELGIIKGLKTKQDKKDKLIKDAKIKIKKEVKQEVVKKEIVEKQRKEGYPCTCGQVFRRNSRMETCLKSHTYFSDIDFKCSSCDKKFKTDQELIYHRNHHHRKRYPCKFCPTNYHTQKALFKHLQIHQQVQLTEFKVIIEVNQGKIDLNCLICKKTSATLPELKNHIMKDHKEPYNCKYCKKQTFPKLTEFIDHFKKCHLDIGNQSLLEVIEAFSKLVKAWKCDSCGLQFYEADKLAIHQMNDHTQDMKNEQHFQCEDCQRVFVSIQGLHSHRRMHHRPEETEPTEPEEVGVMCLECRKICKDMTALTSHMRLHSMDRKYPCKFCDFRFATPQKRKTHSEIHTGDMKYVCFICEYQCSSENRLKHHKMSIKHLNMKEYLLTGKPLIEEEPTKKEKDRKKDSVKKKKKDKKDREVNLENFFVCDICGERFESEDAMREHKLTHPFIEFPNEENPSRIFFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837932;
- 90% Identity
- iTF_00837932;
- 80% Identity
- -