Basic Information

Insect: Idaea aversata
Gene Symbol: -
Assembly: GCA_907269075.1
Location: OU026108.1:10356871-10365745[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.1 84 4.5 4.1 1 23 249 271 249 271 0.98

2 9 0.24 19 6.6 0.2 1 23 291 312 291 312 0.97

3 9 0.00042 0.033 15.2 0.4 1 23 320 343 320 343 0.89

4 9 0.19 15 6.9 0.7 1 23 358 381 358 381 0.90

5 9 6.1e-07 4.8e-05 24.2 2.0 2 23 392 413 391 413 0.97

6 9 0.00029 0.023 15.7 1.2 1 23 419 441 419 441 0.95

7 9 8.8e-05 0.0069 17.4 1.3 2 23 448 469 448 469 0.97

8 9 2.7e-06 0.00021 22.1 2.9 1 23 475 497 475 497 0.97

9 9 0.0025 0.2 12.8 0.0 1 21 503 523 503 524 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.1	84	4.5	4.1	1	23	249	271	249	271	0.98
2	9	0.24	19	6.6	0.2	1	23	291	312	291	312	0.97
3	9	0.00042	0.033	15.2	0.4	1	23	320	343	320	343	0.89
4	9	0.19	15	6.9	0.7	1	23	358	381	358	381	0.90
5	9	6.1e-07	4.8e-05	24.2	2.0	2	23	392	413	391	413	0.97
6	9	0.00029	0.023	15.7	1.2	1	23	419	441	419	441	0.95
7	9	8.8e-05	0.0069	17.4	1.3	2	23	448	469	448	469	0.97
8	9	2.7e-06	0.00021	22.1	2.9	1	23	475	497	475	497	0.97
9	9	0.0025	0.2	12.8	0.0	1	21	503	523	503	524	0.95

Sequence Information

Coding Sequence: ATGGATTTAATGTGTCGATTGTGTTGTTCCACAATGTTCGTAAATAACAATATATTTGATGAAGAAAATGCTTTGTATCTAAAAATGTCGTTATACCTGCCTATTAAGGTATTTAAGAATGACGGTCTTCCGAATAAGATATGCGATAGGTGCAGCTGTAAAGTCAATGATTTGTACCAGTTTTGCAATGAAACTATTGAGGTTCAATCGCGGTTGCGAGCTATATTGTTATCAAATAGCATTGTCGAAGACTCCGTTGACCTGACGAGGGTCAAGGAAAATGCATCACCTCCACAAATAAACCACAAACTCGAACAAAGTACACAGACTGATGTAAATGCAGTACAAAATGTAACACCCTCGGCTGACCAAGCTAATATAATCTTCGATGATAAAATAATAATAAAACAAGAGCCCATAACGTCACAAATCAAGGAGGAATCATCGAACGAAGACTTCGACCGAGATTTCTCTGATGATGACGATATATCGTTGATCTCATTGAAAAAACAAAAGAAAGATAAAGTTTGTAATGGTGTCGAAAAACGTAGTAAGAAAAAGAAGGGAAAGTTAAAAGATTGGTTAATACATGTCTTACCAAAAGATTCGGGCATAAAGGTAGTAGAAAAGGATGAAACAGATGACAATAAAGCGGAGAACAAAGAACTATCTTATACAGACAGTAAAGAGTTCAGTGTATCAATAGACATGAGTAACATAAAACAGGAGATCACGGAGCCCGCCTACAACTGCTGTATTTGTCTCGCCACTTGCTACACCAGAGCCGATATGGTGCAGCATTACAAAAGTCATGTAACAGAAACCTTGGAGACGCCACCACCTGCGCCGGCGCCGCCTGAGAAGGAACCCTTCAGATGTGCGAGGTGTAATAAGGGTGTGACAGCGAGCGAGTGGTCGAGCCATTGGATGCGGCATTGGACGCGCGACCTGAGGCCCTACCGCTGCGGACTCTGCGAGAAGACGTTCAGGGATCCGTACCAGATACTCAAACATGGTGTATCTACCCACGGGTCGGCCTCGCTGCCCCCTCCCCCGGCGCCCGCCCCCCGCTTCCTGTGCGACGGCTGCCCCTCCCGGTTCGTGTACATGCGGTGCCTCACGGCGCACCGCGACCTGGCCCACCCGGAGCTCCGCGCGCGCCCGCTCGAACTCAGGTGTCCCACCTGCGGGAGGAGCTTCGCGCATCTCAACTCCTTGAGGAGACATCTGAGGAGTCATTCCGGGGAGAGGAACTTTCTTTGTAATGTCTGTGGGAAGGCGTTATCATCTCGCGAACACCTAAAGTTCCACATCCGTATCCACACCGGTGACAAGCCGAACGTGTGCGGCACCTGCGGCAAGGGGTTCGTCAAGAAGTGTAACCTGACGCTGCACGAGCGCGTCCACTCGGGGGAGAAGCCGCACGTCTGCTCGCACTGCGGGAAGGCGTTCAGTCAACGATCTACGCTTGTCATACACGAAAGATACCACAGCGGCGCCCGACCATACGTGTGCTCGCTGTGCGGCCGCGGGTTCGTCGCCAAGGGACTACTATCCATGCATTTGAAGTCTACTTGCATTTAG
Protein Sequence: MDLMCRLCCSTMFVNNNIFDEENALYLKMSLYLPIKVFKNDGLPNKICDRCSCKVNDLYQFCNETIEVQSRLRAILLSNSIVEDSVDLTRVKENASPPQINHKLEQSTQTDVNAVQNVTPSADQANIIFDDKIIIKQEPITSQIKEESSNEDFDRDFSDDDDISLISLKKQKKDKVCNGVEKRSKKKKGKLKDWLIHVLPKDSGIKVVEKDETDDNKAENKELSYTDSKEFSVSIDMSNIKQEITEPAYNCCICLATCYTRADMVQHYKSHVTETLETPPPAPAPPEKEPFRCARCNKGVTASEWSSHWMRHWTRDLRPYRCGLCEKTFRDPYQILKHGVSTHGSASLPPPPAPAPRFLCDGCPSRFVYMRCLTAHRDLAHPELRARPLELRCPTCGRSFAHLNSLRRHLRSHSGERNFLCNVCGKALSSREHLKFHIRIHTGDKPNVCGTCGKGFVKKCNLTLHERVHSGEKPHVCSHCGKAFSQRSTLVIHERYHSGARPYVCSLCGRGFVAKGLLSMHLKSTCI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00837912;
90% Identity: iTF_00837912;
80% Identity: -