Iave015183.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- -
- Assembly
- GCA_907269075.1
- Location
- OU026083.1:10118994-10128247[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.023 1.8 9.8 4.6 1 23 140 162 140 162 0.98 2 11 0.0002 0.016 16.3 0.7 1 23 168 190 168 190 0.98 3 11 7.2e-05 0.0056 17.7 1.7 1 23 196 219 196 219 0.96 4 11 0.01 0.81 10.9 3.3 1 21 225 245 225 247 0.95 5 11 0.0003 0.024 15.7 4.1 1 23 253 275 253 275 0.99 6 11 6.6e-06 0.00052 20.9 3.7 1 23 281 303 281 303 0.99 7 11 0.0014 0.11 13.6 0.9 1 23 311 334 311 334 0.97 8 11 0.0043 0.34 12.1 3.4 2 23 341 362 340 362 0.96 9 11 0.00036 0.028 15.5 3.2 1 23 368 390 368 390 0.98 10 11 4.6e-05 0.0036 18.3 1.8 1 23 396 419 396 419 0.93 11 11 5e-06 0.00039 21.3 3.9 1 23 433 455 433 455 0.96
Sequence Information
- Coding Sequence
- ATGTCTGTACAAGACAACATTGCGGACACCGGGGAAGAGGAGCAGGACAATGGGGTGACATACTTCGTTGACGAAGAGGGGCGGTACTACTACCAGTCGGCGGGACAGGGCCAGGGGCTCGTCTCACTATCCGGCAACGATGAGAACGCAGATGAAACATTAACGGAAGAGGATCCGATGAGGTTGGGCGAGGATGCTGAGAGCTACCAGACAGTCACCCTTCTACCTTCAGAGTCTACTGGTGGTGAGGTCAGCTATGTCCTCGTCGTGCAGGAGGATAATAAACCTAATGTCGATCTTGATTTAAAACCACCCCCGGATAAGAGCGATGTGTACGTATTCGAAGAAGAGGGGGAGAATGTTTCCGAAGAGGAACGAGAGAAACGTCCGAGGAAGAAGCGCGCCAAACGAGCTCTCTTCACTTGCAACTTCTGTTCATACACCAGCCACAGGAGATACTTGCTGTTGCGTCACTTGAAGGCGCACTCAGAGGAGCGACCGCACAAGTGCGTCGTATGCGAGCGCGGCTTCAAGACAGTCGCCAGTCTGCAGAACCATGTCAACATGCACAACGGCGTCAAGCCGCATGTATGCAAATATTGCAACAGCCCGTTCACAACATCTGGCGAGCTGGTCCGTCACGTTCGTTACAAGCACACGCACGAGAAGCCGCACAAGTGCACTGAATGCGACTACGCATCCGTCGAGCTGTCCAAGCTGCGCAGGCACATCCGATGCCACACTGGAGAGAGGCCATTCCAGTGCCAACATTGCACATACGCTTCTCCGGACACGTTCAAACTGAAACGTCACATGCGCACGCACACGGGCGAGAAACCATACAAGTGCGACATGTGCAGCATGTGCTTCACGCAGTCGAACTCGCTCAAGGCCCATCGACGCATCCATAACGTAGCTGAGAAACCGGTGTACCAATGCGAGCTGTGCCCGGCGAAATGTGGCCGCAAGACCGATCTGCGTATACACGTGCAGAAGCTTCACACATCGGACAAGCCGCTCGAATGCAAGCGGTGCGGGAAGTCCTTCCCGGATAGATATTCCTGCAAGGTTCATAACAAGACCCACGAAGGCGAGAAATGCTTCAAGTGCCAGCTGTGCCCATACGCTTCGACTACGTCTCGCCATCTGAAGACTCATCTCCTCAAACACACGGATGAGAAGCCGTTCTTGTGTGACTTATGTGACCAGTCATTCAGGCAAAAGCAACTGCTACGTCGCCACTACAACTTATACCACAATCCTGACTATGTGCCGAAGCCACCCAAAGAGAAGAGCCATTCCTGCCACGGGTGTAACCGCACTTTCGCGCACAAAGGCAACCTGATCCGCCATCTGGCCATACATGATCCTGAATCTGGTTACCAAGAACGGGCATTGGCTCTGAAACTGGGCAGGCAGAAGAAGGTCAAATACATTGATGCTGAAACACTAAAGAATATGAAAACGGACCCGGACAGCTTAACGGGTACAACGAGCCTTGTGAAGGTGTCGGCGAACGAGAAGCAGCGCCGCGAGCTGGTGACCGTGTCCGATGGTGACGGACAACAATATGTTGTGCTCGAAGTTATACAACTGGAGGACGGCACTGAACAGCAGGTTGCCGTTGTCGCACCAGAATATAACCCACAAGCCGATGATGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGCGGAGGAAGAAGAGGAAGAGGAGGAGCCTGAAGAGGAAGACGAAGAGGAAGAGGATGAGGATGATGGCGAAGAGGAGATAATACCGCCGGAGGTGACGAAATCTGCCGCACCTGATCGGAGTGTCAAGTTAGAACAGGAGGTCGATGCTTGCTTTGGATTTGAAGAAGAAAACGAGGAAGATGAAGAAGTATTCAGTGAAAAAGTTATATACCAATTGGTCTAA
- Protein Sequence
- MSVQDNIADTGEEEQDNGVTYFVDEEGRYYYQSAGQGQGLVSLSGNDENADETLTEEDPMRLGEDAESYQTVTLLPSESTGGEVSYVLVVQEDNKPNVDLDLKPPPDKSDVYVFEEEGENVSEEEREKRPRKKRAKRALFTCNFCSYTSHRRYLLLRHLKAHSEERPHKCVVCERGFKTVASLQNHVNMHNGVKPHVCKYCNSPFTTSGELVRHVRYKHTHEKPHKCTECDYASVELSKLRRHIRCHTGERPFQCQHCTYASPDTFKLKRHMRTHTGEKPYKCDMCSMCFTQSNSLKAHRRIHNVAEKPVYQCELCPAKCGRKTDLRIHVQKLHTSDKPLECKRCGKSFPDRYSCKVHNKTHEGEKCFKCQLCPYASTTSRHLKTHLLKHTDEKPFLCDLCDQSFRQKQLLRRHYNLYHNPDYVPKPPKEKSHSCHGCNRTFAHKGNLIRHLAIHDPESGYQERALALKLGRQKKVKYIDAETLKNMKTDPDSLTGTTSLVKVSANEKQRRELVTVSDGDGQQYVVLEVIQLEDGTEQQVAVVAPEYNPQADDEEEEEEEEEEAEEEEEEEEPEEEDEEEEDEDDGEEEIIPPEVTKSAAPDRSVKLEQEVDACFGFEEENEEDEEVFSEKVIYQLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00836829;
- 90% Identity
- iTF_00837822;
- 80% Identity
- -