Iave020574.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- -
- Assembly
- GCA_907269075.1
- Location
- OU026086.1:14474755-14491501[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1 82 4.6 0.7 2 11 262 271 262 283 0.82 2 12 0.01 0.82 10.9 0.1 1 21 288 310 288 314 0.92 3 12 0.00057 0.045 14.8 2.1 2 23 416 438 415 438 0.96 4 12 0.0023 0.18 12.9 0.0 1 23 444 466 444 466 0.96 5 12 0.023 1.8 9.8 0.1 1 23 475 498 475 498 0.89 6 12 3.1e-06 0.00025 21.9 4.4 1 23 503 525 503 525 0.98 7 12 1.8e-05 0.0014 19.6 0.4 1 23 531 553 531 553 0.97 8 12 3.4e-05 0.0027 18.7 2.3 1 23 559 581 559 581 0.98 9 12 2.6e-08 2e-06 28.5 0.2 1 23 587 609 587 609 0.98 10 12 0.016 1.3 10.2 7.8 1 23 615 637 615 637 0.99 11 12 0.0081 0.64 11.2 0.1 1 23 687 709 687 709 0.98 12 12 0.00017 0.013 16.5 1.4 2 23 715 737 714 737 0.94
Sequence Information
- Coding Sequence
- ATGGAAGTATTTCTGTATAATTCAACTGTTTGTAGATTATGTGGAGAAGAAAACGATAATGGGACATTCTTATATTCAAGTGAAGATAGTCATCAAAATATTAGTGATTTAGTTAATGCGTATTTGCCAATCAAGGTGTCTGACGATGGCCAGCTGCCTCGGACCATCTGTCCTGGATGCACCATACAGTTGGAAGCCACCGTGGAATTCATCAACCTAATTATCAATGGCCAGAAAGCCATCCGTTCATTGTATCAAAGAGAAAAGGAATACAAAAAGAATATTCTCAAAACAACTGAGGAAGAGGAAGTCTTTAGAGAGAATGGGACCAAAGAAGTAATTGAAACCCCCATCTATACTGAGGAACACCCAGCTTCCCTCCAAGTGGCTGGTCTTGACAAGCCCAAACGCAAGCGTGGCCGACCTCCTAAAAAACACAAGACTCCTGAAGAACTGGCACAGGAGGCCGCTGCGAAACAGGAGGAGATAAAAGTAGTAGAGGAGGTCAGAAATGAGGAACCTATGGGGAAAAGGAAACGAAGACATCCGGAGAGGTTCAAAGAAGTTGTTCAGGGCAAGGAACTTGAAAAGATATTCCTAGAAGAAGGTGTAATAGACAAAGAGGAGAATGAACAAGAAGTTCAACAAGAGAAGGAAGATGTGAAGCCGGCACCCCCGAAAGTGCCTGAGGTTATTGGACACACTGAGTCGGGGGAACTAGTGGTTGTTGTCAAGGGAAAAGGCAGGGGCAGACCTAAAGGTCGTCTCCGTCAAACGCGCGAGAAGTGCGCGATATGCGGTAAAGAGTTCTCGTGCGTGGGTCGGTACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGTCCCGCCGCCGGCTGCGGACGGGAGTTCACCGCGAGGCTCGACTTCACTCATCATCAGGCTGAAGAGGGGCATCAAGGACAACTCGTTATACCTAAGAAGGAGAAAGTAGATTCACAAGATCTGTTGGACGTCCAAGAGCCAGAAGCCACTCTAGCAGAGAAGCCAACCGAAGCTATCGATTCTTTACCTGACTTGAATCCAACACCACTTGTTGAAGACCTGACTTCCACTGAAGACTTCTTGAAGATGCCTGACTTAACTCCCGAGAGTAATACGCTGGAGGATAATATTGAAGTTACCGATCCGGAAGCTACCGCAACAACGGAAGTTGGTGAGAGAGATGAGTCTGAATCACCGAGTAAATCTAAGAAGTTGAAATGTCCGCATTGCGACAAGAGATATAGCAGTAAACAGAGCAAGTCGCTGCATATTAAGGTGGCCCACAAAGGAGAGCGGGCTTACATTTGCAGCGAGTGCGGAGCAGCGTTCGCGTACCCTCGAGCCCTGGCGTTACACACTCTTGCGCACGCTCGACGCAAGCCGACCAAGGGATTCGCGTGTGATCTGTGTGGGAAGGTGTTAAATCACCCGTCATCGGTAGCGTATCACAAGGAGGCGGAACACGCGAACCAGCGCTACGTATGCAACAAGTGCAGCAAGTCGTTCAAACACAAGCAGCTGTTGCAGCGGCACCAGCTCGTACACTCGCAGCACAGGCCTTATGCTTGCAAGAGTTGTGGTGCTAAATTTAAGACGAAAGCGAATCTAATAAACCACCAGCTACTTCACTCTGGTATCAAGAAGTTCCAATGTGAGATATGTAAGCAGAGGTTCGCGCACAAGACCAGTCTTACGCTGCACGTCAGGTGGCATAATGGTCAAAAACCGTACGTATGCAAAATATGCGGCAAAGCATTCAGTCAGAAGGGCAACCTGTCCGAACACCTGCGTATACACACGGGAGAGAAGCCGTACCGCTGCGTGCATTGCTCTCGGAGGTTCACTACCTCGTCGCAACATAGGCTGCATCTTAGGAGACATATGGTTGGCGGCAGTCTAACACAACCAGAAACTGAAATAGAAGTATCCCTCAGCGATCCGTTATACGTAGAGACAAGCGAAGACGGCGCCGAAGCTGCGAGCGAAGTGTCCATTCCCGAAGTGACAGTGAGCGAAGCGCACGCGAAGTTCCCCTGCGACTTGTGCGGAAGTGTGTTGGCTTCGGAGCGAGCCTTGATTAGACATAAGAAGAGACATTCACAGCCGCTGCTTAACTGTCCCTATTGTTCGAAGACGTTCGTCGATGTTATTAACCTTAATAAACATAAAAAGCATGTACACAAACAGCCTCCCATCAGCCTAAGCCTGCTAGCTCCCCAAGACATACCCGAACGTATCGAGATAATCGAAGGAGACAACGACGAGTACACCATCGTCGAGGAAGACAACGACAACGAGATCGACATCGATGACGACGACAAACAAGACGAACGTGTTATATACGTCACGTATGAGATGGATGATGACAACTCGCCCGCTTACCAGATTATTGATCCTACTGAACAGGAGCAGTCAATAGAATTAGAGAGCGAGAAGCTTGTATCGGCGCCATTGTTCACTACCGGCGCGAGCGGCGCTATGCTGTTGCAAGAACCGAAACTCATTGACACGCTCGTTCACCACGATATCCCGCAAGTGACGGACGAGCAAGGCAACCCGCTACACTTCACGATGCAGGATGGCACGCAGCTCGCCATTACCTCGCTGGATGGACACTCTCTACACGTAATAACTCAAGATGGGCAGACAATACCTGTTGAAATCAACAGCTTCACAGAACCGGTACGATTTTAA
- Protein Sequence
- MEVFLYNSTVCRLCGEENDNGTFLYSSEDSHQNISDLVNAYLPIKVSDDGQLPRTICPGCTIQLEATVEFINLIINGQKAIRSLYQREKEYKKNILKTTEEEEVFRENGTKEVIETPIYTEEHPASLQVAGLDKPKRKRGRPPKKHKTPEELAQEAAAKQEEIKVVEEVRNEEPMGKRKRRHPERFKEVVQGKELEKIFLEEGVIDKEENEQEVQQEKEDVKPAPPKVPEVIGHTESGELVVVVKGKGRGRPKGRLRQTREKCAICGKEFSCVGRYMSHVAAHGPVLYRCPAAGCGREFTARLDFTHHQAEEGHQGQLVIPKKEKVDSQDLLDVQEPEATLAEKPTEAIDSLPDLNPTPLVEDLTSTEDFLKMPDLTPESNTLEDNIEVTDPEATATTEVGERDESESPSKSKKLKCPHCDKRYSSKQSKSLHIKVAHKGERAYICSECGAAFAYPRALALHTLAHARRKPTKGFACDLCGKVLNHPSSVAYHKEAEHANQRYVCNKCSKSFKHKQLLQRHQLVHSQHRPYACKSCGAKFKTKANLINHQLLHSGIKKFQCEICKQRFAHKTSLTLHVRWHNGQKPYVCKICGKAFSQKGNLSEHLRIHTGEKPYRCVHCSRRFTTSSQHRLHLRRHMVGGSLTQPETEIEVSLSDPLYVETSEDGAEAASEVSIPEVTVSEAHAKFPCDLCGSVLASERALIRHKKRHSQPLLNCPYCSKTFVDVINLNKHKKHVHKQPPISLSLLAPQDIPERIEIIEGDNDEYTIVEEDNDNEIDIDDDDKQDERVIYVTYEMDDDNSPAYQIIDPTEQEQSIELESEKLVSAPLFTTGASGAMLLQEPKLIDTLVHHDIPQVTDEQGNPLHFTMQDGTQLAITSLDGHSLHVITQDGQTIPVEINSFTEPVRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00835851; iTF_00837790;
- 90% Identity
- iTF_00837790;
- 80% Identity
- -