Basic Information

Insect: Idaea aversata
Gene Symbol: -
Assembly: GCA_907269075.1
Location: OU026110.1:7381181-7391015[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.04 3.1 9.0 0.4 5 21 185 201 183 202 0.93

2 12 0.00077 0.06 14.4 1.2 3 23 226 246 224 246 0.97

3 12 2.9e-05 0.0023 18.9 5.6 1 23 261 283 261 283 0.98

4 12 0.00048 0.038 15.1 6.4 1 23 291 314 291 314 0.95

5 12 0.0086 0.68 11.1 0.3 2 23 320 342 319 342 0.91

6 12 0.13 11 7.4 8.0 1 23 347 369 347 369 0.97

7 12 1.6e-06 0.00012 22.9 1.6 1 23 375 397 375 397 0.95

8 12 2.8e-06 0.00022 22.1 0.6 1 23 403 425 403 425 0.99

9 12 1.6e-06 0.00013 22.8 0.2 1 23 431 453 431 453 0.98

10 12 5.3e-05 0.0042 18.1 0.3 1 23 459 481 459 481 0.99

11 12 4.4e-05 0.0034 18.3 2.1 1 21 487 507 487 509 0.96

12 12 4.6e-07 3.6e-05 24.6 0.4 1 23 515 537 515 537 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.04	3.1	9.0	0.4	5	21	185	201	183	202	0.93
2	12	0.00077	0.06	14.4	1.2	3	23	226	246	224	246	0.97
3	12	2.9e-05	0.0023	18.9	5.6	1	23	261	283	261	283	0.98
4	12	0.00048	0.038	15.1	6.4	1	23	291	314	291	314	0.95
5	12	0.0086	0.68	11.1	0.3	2	23	320	342	319	342	0.91
6	12	0.13	11	7.4	8.0	1	23	347	369	347	369	0.97
7	12	1.6e-06	0.00012	22.9	1.6	1	23	375	397	375	397	0.95
8	12	2.8e-06	0.00022	22.1	0.6	1	23	403	425	403	425	0.99
9	12	1.6e-06	0.00013	22.8	0.2	1	23	431	453	431	453	0.98
10	12	5.3e-05	0.0042	18.1	0.3	1	23	459	481	459	481	0.99
11	12	4.4e-05	0.0034	18.3	2.1	1	21	487	507	487	509	0.96
12	12	4.6e-07	3.6e-05	24.6	0.4	1	23	515	537	515	537	0.99

Sequence Information

Coding Sequence: ATGGATATAAGTGTAGAAACGTTTAATAGAATATGTCGGACTTGTCTTAGTGAGTCTAGTGACTTGAAATCCTTGCTAACAAAACTAGAAGGCGAAGAAAGAAACTTACTCGATATGTTTACGTTTACTGCTAATATTACCTTTGAAACCGAAGATATACTACCTAAACAGGTTTGTGGAGACTGCCAGTACAATATTCAGAAAGCAGATGAGTTTAAAAGACGATGCTTACAGTCCCAGAGCGTTTTAAAAAAGATCGCCGAACCTCACGACTCGAGTGATAATATCACCGATTTTGACCTAAAAAAAGATATTCACAAGCATTTTATGGACATATCACCTGATTTAGATGTTAAAGAAGGCGATAGTAAAGTTTTTAGCGACATATCTCAAAGTTTTAACTGTTTGAACAACTTGAAACGCGACGAGAAAGTTGTAAAAGAAGAACTAGATATAGAATACGAAGAAGACTATTCAAATCATGATGACGATGATTATAAACCTTTTCCTGAACTAAGCCACGAGCTAATAATCAAGAAAATACATACATGTGTCTGCAATCAACAGTTTACTTCAAAACAATCATTAAAAGAACATCTAAAAGTGTTTAACTGTAAAACTAACAAGAAAAAGCAAGTGAAAGCTTTAGGAATCAAAATAAAGACTAGTTTAGCATGTCACAAGTGTGATTTAGTATTTACCAACTTCCCCGATTACAGGGAACATGAGAAAACCCATCCGGAAACATCGACAATCGTTTCAACAGATGACGGACCGAAATTTGAATGCTCCAAATGTTTCCGGAAGTTTAAAACTAAAAAACTTCTCAACCGTCACCTAAAGAGACATGAAAACAGCGATAATATCTCTCATACATGTCATAAATGTAAGCGAGACTTTAAATATGCCGCCCATTTAAAAACCCACATGGTTTCTGTCCATATGATCAATGAAATTACCTGTGATATTTGTAATGAGAAGTTTCTAACGAAATCAGGATTGGAAACCCATCGAGATGAGAATCATTCAAAGAAGAAACACTATTGTCATATGTGTAACAAGTCATTTTTGATGCTCTGTACTTTGAAAGACCATATCAGGTCCCATACTGGCGAGAAGCCATTCCTATGTTCCACATGTGGTAAAGGCTTCAGTCAGAAGACCAACTTGGCGCAGCACACCAGGCGGCATATGGGGTTGAAGCCATTTAAATGTGATACTTGTTCAAAAGGTTTCGTATCGAAAGGTGAACTAGAAGCTCACACCCGTAAACACAGCGGAGCACATCCGTTCGTGTGCGACGAATGTGGTAACGGGTTCACGACGTCCAGCGCTCTCGTGAAACACAGACGTATACACACTGGGGAACGGCCGTACCAGTGCGATCTGTGCCCTATGAAGTTCGCTGCGTCGGGTACACTAATGAACCATCGTCGTACGCATACAGGCGAACGTCCCTATCAATGCTCGTATTGTGAGAAGGCGTTCGTACAGCGGACTGACTTGGTCAGTCATATTAGATGTCATACAGGTGAAAGGCCATACGTGTGCACTCAGTGTGGCCAGTCGTTCAGGAAAGCGGCAACACTGAAGGCTCACATCAAAATGCACGGCAAAGACTCAATGTTGCAAGGTGTTAATGCTTTATGCGCGCATCTTAAAATTTCACTTCCGCAGCTTCGACCTGTATTACTTATGGGGAACGCAGCTGGACCATGTGACTTTTGTGTTACAGTAATGCGCGCGCATCTTAAAATTTCACTTCCGCAGCTTCGACCTGTATTACTTATGGGGAACGCAGCTGGAACATGTGACTTTTGTGTTACAGATGCGCGCATCTTAAAATTTCACTTCCGCAGCTTCGACCTGTATTACTTATGGGGAACGCAGCTGGACCATGTGACTTTTGTGTTACAGTAA
Protein Sequence: MDISVETFNRICRTCLSESSDLKSLLTKLEGEERNLLDMFTFTANITFETEDILPKQVCGDCQYNIQKADEFKRRCLQSQSVLKKIAEPHDSSDNITDFDLKKDIHKHFMDISPDLDVKEGDSKVFSDISQSFNCLNNLKRDEKVVKEELDIEYEEDYSNHDDDDYKPFPELSHELIIKKIHTCVCNQQFTSKQSLKEHLKVFNCKTNKKKQVKALGIKIKTSLACHKCDLVFTNFPDYREHEKTHPETSTIVSTDDGPKFECSKCFRKFKTKKLLNRHLKRHENSDNISHTCHKCKRDFKYAAHLKTHMVSVHMINEITCDICNEKFLTKSGLETHRDENHSKKKHYCHMCNKSFLMLCTLKDHIRSHTGEKPFLCSTCGKGFSQKTNLAQHTRRHMGLKPFKCDTCSKGFVSKGELEAHTRKHSGAHPFVCDECGNGFTTSSALVKHRRIHTGERPYQCDLCPMKFAASGTLMNHRRTHTGERPYQCSYCEKAFVQRTDLVSHIRCHTGERPYVCTQCGQSFRKAATLKAHIKMHGKDSMLQGVNALCAHLKISLPQLRPVLLMGNAAGPCDFCVTVMRAHLKISLPQLRPVLLMGNAAGTCDFCVTDARILKFHFRSFDLYYLWGTQLDHVTFVLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00835835;
90% Identity: iTF_00837785;
80% Identity: -