Iave014760.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- -
- Assembly
- GCA_907269075.1
- Location
- OU026083.1:7154889-7156631[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.6e-07 1.3e-05 26.0 0.8 2 23 142 164 141 164 0.95 2 14 0.00029 0.023 15.8 3.4 2 23 171 193 170 193 0.95 3 14 0.0018 0.14 13.3 2.3 3 23 201 222 199 222 0.90 4 14 7.9e-07 6.2e-05 23.8 0.5 3 23 231 252 229 252 0.96 5 14 7.2e-05 0.0057 17.7 1.4 2 23 259 281 258 281 0.95 6 14 0.00098 0.077 14.1 1.4 1 23 288 311 288 311 0.96 7 14 9.9e-05 0.0078 17.2 1.6 3 23 318 339 316 339 0.95 8 14 0.0056 0.44 11.7 2.1 1 23 355 378 355 378 0.97 9 14 1.6e-05 0.0012 19.7 0.3 3 23 388 409 387 409 0.97 10 14 2.2e-06 0.00017 22.4 0.9 2 23 415 437 415 437 0.97 11 14 0.046 3.6 8.8 4.3 3 23 446 467 444 467 0.94 12 14 3.1e-06 0.00024 22.0 1.8 1 23 472 494 472 494 0.97 13 14 0.0037 0.29 12.3 1.7 1 23 500 523 500 523 0.96 14 14 0.021 1.7 9.9 0.2 1 21 528 548 528 549 0.95
Sequence Information
- Coding Sequence
- ATGGAAGAAATTTACGTAAAAATCGAGCCAATGGATGATGAAGAGATAAAGAAAGAAGTAGATATAAAAATTAAAACGGAAAACATTAAACAAGATTCTGAACAAACTCGTACAAAGCTAGAAAACAAACCAAGTTACTCACTCGAAGGATATCATGAAATAATTAAAAATCAAATATTCATTAAAGAACAAAGCGCACAAGATTACTCTGAGAATTTTGCACAGGACGGACCAAACATAGCTTTTGCACAGCACGGATCAAACCTAGCTTTTGCACAGGATGGATCAAACCTAGCTTTTGCACAGCACGGAGCAAACCTAGCTTTTGCCCAAGATGGACCAAACCTAGCTTTTGCCCAGGATGGACCAAACCATATTGAAATCACAGGAAAAGTATACGAAAACGGTCAAATAAACAGAATATCCTGTACGATTTGCGATAAAACTTTCAAAAATAGAGCCAACTTAAAAAACCACATCAAATACATACACACAGACGATCACAACATCGAATGTGACATTTGTTACCGAACATTCAAATCACACGTTCACCTAAAATCCCACACTCAGTCCGTTCACGCTGAAACCGAACTATTATTCTGTGAAATTTGCAAAAAACAATTTCAAAATAAGAGAAAACTACAAAATCATATTTACTTCACTCACCCGGAACCGGGCCAAGAATCTATATGTAATATTTGCAACAAAACATATAAAAGTCCATATAATTTGAAATTACATATTCGGCAAGTTCACCCCGAGGGCAAAGAAGTATCGTGCCCACATTGCAACAAATCATTCAAAATAGACACATTACTCCAAAGACATATTAAATGGAGTCACCCATTCGATGGGATGACATATAAATGCACACAATGCAATAAAATACTACCTTCATTAGCTTGCTTGCAAAAACACATTGAAAACACTCACTCGTACCAAAAATCTATATGTCAACTTTGCAATCGAGCATTCAAAACTAAAAAATCACTCGATAGACATTTAAAAAACTTACATGACAATGCTAGTAATAAAAGCTTAAAGGAATTCAAACCCGGTGAATTTGTATGTACTTTCTGCGATAGAAACTTCCAAACTAATACAGCTATGTACTACCATATTCAAAGATACCATACCGATAATATTATAGATACAAAATTGTGTTCGATTTGCAATAAAACATATTCGGACATTGCATCGTTGCAACGACATATGTCCTCCGTCCATTCTCTTGAAACAGCAACATGTAATATATGTTCTAAGGAGTTTAAATCACAAATAAATCTCCAAAGTCATATAAGAATAACCCACGCTCCCCCAGAATCGGCTCAAATATGTAAAATTTGCAAGAAAACATTCAAATGTGCCCTACATTTAAGAATGCACATCACTTCCGTTCACCAAAAAGGCGATTTCTTCTGCGAAATTTGCAACAAACAATTTGCCACTGCTAAATACTTAAGAAAACACGAAAGAACCCATGTTCAAACCAGAGATTTCTCCTGTAATATATGTTTAAAAACTTACAAGACTTTATTCGCTGTGAATAAACACAAGAAAAATGTACATAAAGTACCAAAATATACCTGTGTTAAATGTGGAGATAGTTTTCATATAAACAGTGAACTTAATGAGCATATTTTGAAGTGTGGAAGTGAAAATGAGAGAGTGATTACTATAGAATTTGAGCCGATACCTGAAGAAGAAATAAAAAAAGAACCGATAGAAATAATAGGAAAATAA
- Protein Sequence
- MEEIYVKIEPMDDEEIKKEVDIKIKTENIKQDSEQTRTKLENKPSYSLEGYHEIIKNQIFIKEQSAQDYSENFAQDGPNIAFAQHGSNLAFAQDGSNLAFAQHGANLAFAQDGPNLAFAQDGPNHIEITGKVYENGQINRISCTICDKTFKNRANLKNHIKYIHTDDHNIECDICYRTFKSHVHLKSHTQSVHAETELLFCEICKKQFQNKRKLQNHIYFTHPEPGQESICNICNKTYKSPYNLKLHIRQVHPEGKEVSCPHCNKSFKIDTLLQRHIKWSHPFDGMTYKCTQCNKILPSLACLQKHIENTHSYQKSICQLCNRAFKTKKSLDRHLKNLHDNASNKSLKEFKPGEFVCTFCDRNFQTNTAMYYHIQRYHTDNIIDTKLCSICNKTYSDIASLQRHMSSVHSLETATCNICSKEFKSQINLQSHIRITHAPPESAQICKICKKTFKCALHLRMHITSVHQKGDFFCEICNKQFATAKYLRKHERTHVQTRDFSCNICLKTYKTLFAVNKHKKNVHKVPKYTCVKCGDSFHINSELNEHILKCGSENERVITIEFEPIPEEEIKKEPIEIIGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -