Iave014643.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- -
- Assembly
- GCA_907269075.1
- Location
- OU026083.1:6068723-6071035[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.8e-05 0.0014 19.6 5.1 1 23 8 31 8 31 0.94 2 20 0.0042 0.33 12.1 0.1 2 23 37 59 36 59 0.95 3 20 5e-06 0.00039 21.3 0.3 2 23 68 90 68 90 0.97 4 20 1.1e-05 0.00085 20.2 1.0 2 23 99 121 98 121 0.94 5 20 0.00033 0.026 15.6 1.4 2 23 129 151 129 151 0.92 6 20 9e-07 7.1e-05 23.6 0.6 2 23 159 181 158 181 0.96 7 20 8.4e-07 6.6e-05 23.7 2.7 1 23 187 210 187 210 0.98 8 20 1.6e-05 0.0013 19.7 0.6 3 23 234 255 232 255 0.96 9 20 0.00055 0.043 14.9 1.7 1 23 283 306 283 306 0.98 10 20 0.18 14 7.0 0.7 2 21 314 333 313 334 0.92 11 20 0.023 1.8 9.8 4.2 1 23 342 365 342 365 0.95 12 20 0.067 5.3 8.3 6.1 1 23 387 410 387 410 0.97 13 20 0.00042 0.033 15.2 0.5 2 23 417 439 416 439 0.96 14 20 3.1e-05 0.0025 18.8 2.2 2 23 446 468 445 468 0.94 15 20 0.0073 0.58 11.3 2.2 1 23 474 497 474 497 0.97 16 20 1.3 1e+02 4.3 8.1 2 23 505 527 505 527 0.95 17 20 9.6e-05 0.0075 17.3 0.2 1 23 534 557 534 557 0.97 18 20 0.0055 0.43 11.7 1.0 1 23 564 587 564 587 0.95 19 20 0.029 2.3 9.4 2.6 5 23 604 623 602 623 0.92 20 20 1.6 1.2e+02 4.0 0.9 1 10 673 682 673 683 0.92
Sequence Information
- Coding Sequence
- ATGTACGTAAACCAGTTAGATTTCTTCTGCGACTACTGCAGTCGCTCTTTTACAAGAAAATACAATTTACAAACTCACATAGAAAACTGCCATATCACCAGTTCGAGTTCTTGTGATATTTGCGAACAGAAATTCGGCAGTCCTGCAGGTTTGCAGCTACATTTAACTAGAGGACATAATTCTAATGATCAGCCATTTCCGGAATGCGACATTTGTGGGCGTACGTTCACACGAAAACAAAACATTGTATCCCATATGATAACAGTGCATCTCCAAGGTGTTGGTCCTGTTATCCGTTGCAGTTTATGCGACAAGACTTTTACTACAGATAGGAATTTACGTCGACATGTCAATTTGCTACATAATCCAGATATCGAATATCCAACTTGTGAATTCTGTACAAAAATCTTTAAAAGTAAACATTCACTTTACGCGCACATGGATGCGGTTCATAATGGGGCAGACAAGGCTATAAAATGTTACATATGCGATAAAGTATATACGAATAATAGAAATCTAAAAAGGCATATAGAAATGTTGCACGGTGAGAAGGAAGAGCATAAGTGTGATATTTGTCCTAAAGTATACACTTCTAACCAAAGCTTGAAGAGGCATATAAAGACTAGACACACAGATGATAATACTAAATCTCCAGACGAAGTATTATACGAATCTGATTGTGAAGAAGAAACTATTATATGTGAAACATGCAATAAAACATTCAAAGAGGAATCGTTGTTGCGCCAACATATAAAAAGAGATCACTCTTTTGATATATTTTACGAATACTGCAAGAACTATTTACAGAAACAAGTTTACCAGGAAAACGACTCGAAAAAAGTCACCTATAAATGCGAATTTTGCTTCTCTTCGTTCATAACTGTGTATGAATTGAAATACCATATGCGAGTCAATCATGACACCGAATACAACCTCTCGTCTTGCAATGTTTGTTTCAACAAGTTTTATAGCAAAGAATCTATGATAAAACATAAGATGATGTGCCTTCCGCCACCTAACGCACACTCGTGCAGCCACTGCGATAAATTATTTACAGATATCTCTAGTTTGGAGTTCCACACACGTATATTTCATCCCCAAGCTCAAATAGCCGATTCTAATATAACCTCTACAGATGAAGCTACAGACATAAATCCATTTAAATGCGGACATTGTAACAGATTGTATTACAGCGATAGATCGCTAAAACATCATATTAAGCTAAAACATTCAACTGATGAAGAAGTCGAATGTGAACTTTGCGGGAAACTATGCAACAATAAGTATTACTTAGCATCGCATATAAAAATTGTTCACACAAGTGTTACTTGGTCGAAATGTGATTACTGCGATAAACAATTTAAATCTAAACGGAATATAAGACGCCATATTGAATACACACATTTGGGCATGCAGAGGTACAAGTGTATAGAATGCGAAACTTTATTTAAAGAGAAGAGGAGTCTACGTAAGCATGTCCGGACTAAACATCCTGATTCCACAACATTTCCACAATGCCATTTTTGTCACAAACGCTTCGAGTCAGCGAAATCTTGCAAAATACATTTAAAACTTTTACATTCCTTTAATATGAACACATACCCTTGCGATCTCTGCTCGGTATCGTTCAACTCAAAAGAAGCTTTGAAAATTCATTTGGAAACGAAGCATTTAGCTGAAGATGAGATTTACAAATGCGAGGAATGCAATCTCGTCTTCAAGGGACTGCAGAAGTTCGAGCAACACAACGAAACTCGACATGTCAGCCTAATATCCAGTTTGAAAAACAAATCTTTACCCCTTTGTATAATCTGTATGAAATACTTTAGCACGCGGAAGACCCTAAAGCGGCATATAAAGAAGTTTCACCTAGAGTTTGAGGTAGATGAACTAGCAAACTACGGATCTAAGAAGCAAATCGTCACTGTCGAATGCGAAGAATGCATTAAAAATCTAAACGACGAATATTACTTTACATATTACAATAAGCTTAAATCGACGCGCGAAGCAATAATTTTCAAATGCGAAATATGTAGAACATCTTTTAATTGCCTAGATTACGCGATTCAAAGGCAAAAGTTACTTAATTTTGATACGTCTAAAACTAAAATGGTGTTAAGTGAGCTATGTACGGCTGAAATGAGTGAAGACGAACCTTGTTATTCCGGTTTTGGGACGCTAAAAATGAAGCCGGAAAGTACGACCTCTGATCTGATTGAAAATCTCGACTATGTAATGGCTGACCAAGAAATAAAACAAGAAATAATTGATTTGGATGACTGCGAGGTAAAAACTGAACCGGTGTCTCCTTAG
- Protein Sequence
- MYVNQLDFFCDYCSRSFTRKYNLQTHIENCHITSSSSCDICEQKFGSPAGLQLHLTRGHNSNDQPFPECDICGRTFTRKQNIVSHMITVHLQGVGPVIRCSLCDKTFTTDRNLRRHVNLLHNPDIEYPTCEFCTKIFKSKHSLYAHMDAVHNGADKAIKCYICDKVYTNNRNLKRHIEMLHGEKEEHKCDICPKVYTSNQSLKRHIKTRHTDDNTKSPDEVLYESDCEEETIICETCNKTFKEESLLRQHIKRDHSFDIFYEYCKNYLQKQVYQENDSKKVTYKCEFCFSSFITVYELKYHMRVNHDTEYNLSSCNVCFNKFYSKESMIKHKMMCLPPPNAHSCSHCDKLFTDISSLEFHTRIFHPQAQIADSNITSTDEATDINPFKCGHCNRLYYSDRSLKHHIKLKHSTDEEVECELCGKLCNNKYYLASHIKIVHTSVTWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPDSTTFPQCHFCHKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFNSKEALKIHLETKHLAEDEIYKCEECNLVFKGLQKFEQHNETRHVSLISSLKNKSLPLCIICMKYFSTRKTLKRHIKKFHLEFEVDELANYGSKKQIVTVECEECIKNLNDEYYFTYYNKLKSTREAIIFKCEICRTSFNCLDYAIQRQKLLNFDTSKTKMVLSELCTAEMSEDEPCYSGFGTLKMKPESTTSDLIENLDYVMADQEIKQEIIDLDDCEVKTEPVSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837776; iTF_00835818; iTF_00836784;
- 90% Identity
- iTF_00837776;
- 80% Identity
- -