Iave006780.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- ZEB2
- Assembly
- GCA_907269075.1
- Location
- OU026104.1:10103993-10109979[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00076 0.06 14.4 1.5 2 21 159 178 158 179 0.94 2 28 5.1 4e+02 2.4 4.1 1 23 212 235 212 235 0.96 3 28 0.00079 0.062 14.4 1.6 1 23 240 262 240 262 0.97 4 28 0.01 0.79 10.9 2.4 2 21 266 285 266 286 0.93 5 28 0.001 0.08 14.0 0.6 2 23 324 346 323 346 0.95 6 28 0.057 4.5 8.5 0.4 3 23 354 373 352 373 0.95 7 28 0.025 2 9.6 0.2 1 23 378 400 378 400 0.98 8 28 0.0018 0.14 13.2 1.4 1 23 406 429 406 429 0.96 9 28 0.093 7.3 7.9 0.3 3 20 440 457 439 459 0.95 10 28 0.0042 0.33 12.1 2.9 2 22 556 576 555 576 0.93 11 28 1.3 1.1e+02 4.2 0.3 3 23 609 630 607 630 0.93 12 28 0.00024 0.019 16.0 0.6 1 23 635 657 635 657 0.96 13 28 0.56 44 5.4 0.6 2 20 661 679 660 681 0.92 14 28 0.00074 0.058 14.5 1.3 1 23 693 716 693 716 0.95 15 28 0.0007 0.055 14.6 1.1 1 23 722 744 722 744 0.98 16 28 0.0019 0.15 13.2 0.4 2 23 752 773 751 773 0.97 17 28 0.44 34 5.7 1.4 1 23 779 802 779 802 0.89 18 28 0.0085 0.67 11.1 0.4 3 23 812 833 811 833 0.96 19 28 4.9e-05 0.0038 18.2 0.2 3 21 947 965 945 966 0.94 20 28 2.4 1.9e+02 3.4 0.0 3 23 973 994 971 994 0.94 21 28 0.0079 0.62 11.2 1.3 1 23 999 1022 999 1022 0.92 22 28 1.6e-06 0.00012 22.9 1.4 1 23 1027 1049 1027 1049 0.98 23 28 0.096 7.5 7.8 2.9 2 20 1053 1071 1053 1073 0.93 24 28 2.5e-05 0.0019 19.1 0.6 1 23 1099 1122 1099 1122 0.95 25 28 0.0015 0.12 13.5 0.4 1 23 1128 1150 1128 1150 0.92 26 28 0.11 8.9 7.6 0.1 1 23 1156 1178 1156 1178 0.97 27 28 0.015 1.2 10.4 0.3 1 23 1184 1207 1184 1207 0.94 28 28 0.00025 0.02 16.0 0.2 2 23 1214 1236 1213 1236 0.92
Sequence Information
- Coding Sequence
- ATGACCCGGCAAGTAGACATCAAGGCTTTAGTGTCGCATATCGTAAAAGGAGACGGTATGGACAAATGCCGAATATGTATGGGGGACACATCACAAGGGCAAGTGCACCTCGGAGACACTGTGATGATGGATGGAGACAAGCCTGTAACTCTCTCTGAGTTACTAGAAACGATTACAGGAGTTCAGGTGGAGTTGGAAGCGACCTTACCCTCAACAGTATGTCTAACTTGCCACCTGTCTGCTTACGAGGCTGCCCAGTTCCGATCTCTGGTCCACAGAGCCAACGAACAATGGAACACTACCCTGCAGCTCTTAGAACACCTACCTGACCACCAGTACTCTAATAACGACAGATTAACTGCTGTACTCGAAAATAAATATATGACAGTCACTATCGAATGCACAAAGCCCCAGCCATCCTATCCAATCATAAAAATAGACGATTTCAAAAGGCTTGGTAAACAAAAAGAATGTCAATGCCCTAATTGTGGCATAAAATTCATATATCCACAGCATTTGTACAAGCATTTAAAGGAATCTGCTGATCTTATAAGAGCTTGTCATATGTGCGCTGAAATTATGAGCAGAGATGAATTAATTAAACATTTAAGTGATGACCATAGTATCGAACCATATTATTGTAGAAAATGCCCAGCTTTGTTTCTGTTTTGTAAACAATTTAAAAAGCACATGGATACAGCCCATGCATCGAATGCTCACACTTGTGTGGACTGTGGGCGCAGCTTCCAATCGTCACCAGCGTTCTGCGCTCATCTCTCCATACACTCGAACAGATCCTGTCCGAACTGCGACAAACAATTCCGCAATCAGAAATGTTATACATACCATGTAAAAGAATGTTGCAATCTAAACACCAAGGAACTTAAGACCAAAAAGGCTACAGTCACAATAAAACACAAGAATGTTAAATTGACAATCGGTAAACGAGGGAGCACAAATAAAAAATGTATTTGCGATTATTGTAACAAAGTTTTCTCTGGAAAGAAGTTTGTGGCCGCGCATATAAAAATAGTACACACAAAAGACACACATAAACCTTGTGTATTCTGTGGAAAAGTATTTGCTGCTGCCCATATGTCCACTCATGTTCGAACGCACAATGCACTTACATACAAATGTCCACAATGTGGAGCTATCATGAAATCAAAGCTTGGATTCATACAACATTTGAGACTTCATACAGGAGAACGCCCTTACACTTGTCAACACTGTGGTGAATCATTCTCAGCATCTTCGAGACGCTCAGAACATATCCGGAATGTCCATAAACAATCTGAAATAATACTTAAACATGGTTGCAAACTATGTCCAGCAAGATTCAAATTACCTTATAAATTAAAGCATCATGTAGAGGAGGAGAAGGAACTCCCACCGAGCCTGTGCCGCGCATGCTTCGAAGACGTCACCAACGCAGTTAATTTCAAGAATCTCTGCGGAAAGTCCGCCTCACAATGGGAAAACGCCATCAATTACCTTTCAGAAATACCCGAAACCAATCAGTTATCAAAAGATTTTATTGTAATTTGTCGCGAAAAACAATTTCAACTGGAAATTGACAATAATTTGTCCTCAGAATTCGTATTTTCTGATAAAGAAGATACAACTCCACAGAAAGAAACACGCCAAAAACAGCAATTTTCATGCAAGTGTCCGTTTTGTTCTAGAAAATTCTCTATTGCTAAAAATCTAAACAACCATTTGAAGAAGACAATGAAACGCTGTTGTAGACTTTGTGGGATTATAATTAACAAGAATAAATTAGCAAAACACCTTAACGAACAACATAATGAAGACGTAATTGATTGTAAAACTTGTTTTGAACTGTTCGATATGCCTGAAGATCTTAGTGTACACCGGTTTAAGTACCATGGGGCTGAATCTTTCACTTGCAAATTTTGTGGACAAGGTTTCACGAGTCTGAGAGCGCTAAGAGCCCATGAATTGTACCATTCCTTGCTTTACTGCTCAGCTTGCGGAATATCTTATGAAAACAACGCTTGTTTTCAGTACCATCAAACATCACAGTGCAAATCGAAAAAGACTCCTTTTGATTCATTCGAATGTAACCATTGTGGTTTGAAATACGATAAGAAACCTTCTTTACGTATACATATTATACAGAAACATTTAAATATATTGCCTTTTGTCTGCCAGACGTGTGGCAAACGGGCTTCCACGCTTCCTCATTTGAAATCCCACGAACTAACGCATAAGAAAGAACGGAAGACTTGGCAATGTTACAACTGCGGCAGTAGTTTTAGGACGGAGTTAGGATATCGTCTCCACATGAGAATTCATAGCGGTATAAGACCTTATAAGTGTGAGCTATGTAACGAGAGTTTTCTATCTTCATCCCGACGGTCAGACCATGTTAAAAGAAGGCATAAAAGTACTAGAGACATGCCTCATGGATGTAAAAGATGTACAGCGAAGTTTATAAGACCCTGGGAATTGAAAAAGCACTACTTAAACGTCCATAGTTCTGTTATTGTCGATGAAACCCTTTGTCCTCCCGGTGTCTGCGTGTCATGCACAAGTGCAGCTCTGTCAGCCATAAAATTTCGTTTATTTGTAAAATCTTCCGAAAGCTTCTGGTACAAAGCCATTAAGAATTTCGCGTGCATAGACTTAGAGGAATTGGATGGGAACATCTTGAAATCTTTATGCGTATTTGTATCAGACAATGATTTATCTTTGGAATTAGCAAGAGATTTCACCGGTGGTGAACCAAACATAGTAGTCAATCGGACTAAGGCGAGAACAGTTAAAAAGACTGGAAGGAAACCGAGATGTCCTAGAACTGGTCCTTCGACTATTTGCCCGGATTGTAAGAAATCGTTTTCTAGCCCGGCTATGTTACATGCTCATCTAAAGAACAGTGACCAAAAAGACGCGTGTTTGACCTGCGGAGCAGTAATTGCTAGAGGTATCGAAATGAAAAACCACATGGAAACAATTCATAATGATAAGACATTCCTATGCAGGCATTGTCCTACTATTTTTAACTCTGAAGATGACTTCAATAAACACGAGAAAGAAGCCCACAAACTAGGTTCTTATACTTGCACTCAATGCGGGCGGACATTCCCCAGAAAATCGTCTTTCGAATCTCATGTGCAAATGCATTTAGTTCGCACTTGTCGTAAATGTGGCGTCCAATTCACCAACCGTAGTTGTTACAGAGAACATAGGTCGCAATGCGAACCTGAAGCTAAACCAAACATGAAAGGTTTTGCGCGAAGTCGACGCTCAAATATCCGTGATCCAGCTACTTATATCTGCGATTACTGTCAAAAGAAATACACAACCAGACCTCAATTGAAGAACCATATCCTCTGGATCCATATGGACGTCAGACCGCATCAATGTCAATGGTGCGGTAAACGGTTCTACACACCAGCGAGACTGGCGGAACATAGTGTCGTCCATACTAGAGTCAGAAACTTTGAATGTGACATTTGCGGTGCTAAATTAGTTTCGAAAATGGCTGCCGTGTATCACAGGAGGCGACATACGGGAGAGAAGCCTTTTACTTGCGAGGATTGTGGGGCAGCCTTTATTTCTTCATCGAGAAGATTAGAACATGCTAAGCGAAAGCATAATAAAGGTGTTAGAATTCAATGTCAGAGTTGTCCGGCTAGTTTTGTTAGAAAAAGTGAACTCAAAAAGCATGTTGGAAAGGCTCATAGTAATAATCATAACGTTGATTGTATTACATAG
- Protein Sequence
- MTRQVDIKALVSHIVKGDGMDKCRICMGDTSQGQVHLGDTVMMDGDKPVTLSELLETITGVQVELEATLPSTVCLTCHLSAYEAAQFRSLVHRANEQWNTTLQLLEHLPDHQYSNNDRLTAVLENKYMTVTIECTKPQPSYPIIKIDDFKRLGKQKECQCPNCGIKFIYPQHLYKHLKESADLIRACHMCAEIMSRDELIKHLSDDHSIEPYYCRKCPALFLFCKQFKKHMDTAHASNAHTCVDCGRSFQSSPAFCAHLSIHSNRSCPNCDKQFRNQKCYTYHVKECCNLNTKELKTKKATVTIKHKNVKLTIGKRGSTNKKCICDYCNKVFSGKKFVAAHIKIVHTKDTHKPCVFCGKVFAAAHMSTHVRTHNALTYKCPQCGAIMKSKLGFIQHLRLHTGERPYTCQHCGESFSASSRRSEHIRNVHKQSEIILKHGCKLCPARFKLPYKLKHHVEEEKELPPSLCRACFEDVTNAVNFKNLCGKSASQWENAINYLSEIPETNQLSKDFIVICREKQFQLEIDNNLSSEFVFSDKEDTTPQKETRQKQQFSCKCPFCSRKFSIAKNLNNHLKKTMKRCCRLCGIIINKNKLAKHLNEQHNEDVIDCKTCFELFDMPEDLSVHRFKYHGAESFTCKFCGQGFTSLRALRAHELYHSLLYCSACGISYENNACFQYHQTSQCKSKKTPFDSFECNHCGLKYDKKPSLRIHIIQKHLNILPFVCQTCGKRASTLPHLKSHELTHKKERKTWQCYNCGSSFRTELGYRLHMRIHSGIRPYKCELCNESFLSSSRRSDHVKRRHKSTRDMPHGCKRCTAKFIRPWELKKHYLNVHSSVIVDETLCPPGVCVSCTSAALSAIKFRLFVKSSESFWYKAIKNFACIDLEELDGNILKSLCVFVSDNDLSLELARDFTGGEPNIVVNRTKARTVKKTGRKPRCPRTGPSTICPDCKKSFSSPAMLHAHLKNSDQKDACLTCGAVIARGIEMKNHMETIHNDKTFLCRHCPTIFNSEDDFNKHEKEAHKLGSYTCTQCGRTFPRKSSFESHVQMHLVRTCRKCGVQFTNRSCYREHRSQCEPEAKPNMKGFARSRRSNIRDPATYICDYCQKKYTTRPQLKNHILWIHMDVRPHQCQWCGKRFYTPARLAEHSVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGEKPFTCEDCGAAFISSSRRLEHAKRKHNKGVRIQCQSCPASFVRKSELKKHVGKAHSNNHNVDCIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -