Iave001935.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Idaea aversata
Gene Symbol
-
Assembly
GCA_907269075.1
Location
OU026112.1:2668961-2677347[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.54 42 5.5 1.0 1 17 42 58 42 65 0.81
2 25 0.18 14 7.0 0.2 2 23 89 111 88 111 0.91
3 25 0.0023 0.18 12.9 0.2 1 23 133 157 133 157 0.97
4 25 0.00098 0.077 14.1 0.1 1 23 161 183 161 183 0.97
5 25 0.0005 0.039 15.0 3.0 1 23 226 249 226 249 0.98
6 25 0.00077 0.06 14.4 5.4 1 23 255 277 255 277 0.98
7 25 8.4e-07 6.6e-05 23.7 2.1 1 23 283 305 283 305 0.98
8 25 1.8e-05 0.0014 19.6 0.3 1 23 311 334 311 334 0.98
9 25 0.015 1.2 10.4 2.1 1 23 387 410 387 410 0.95
10 25 1.2 97 4.3 0.0 2 23 435 457 434 457 0.94
11 25 0.0015 0.12 13.5 1.0 2 23 481 502 480 502 0.97
12 25 0.062 4.9 8.4 1.0 1 23 506 528 506 528 0.98
13 25 0.011 0.86 10.8 2.3 2 23 543 565 542 565 0.97
14 25 0.022 1.7 9.9 6.4 1 23 571 594 571 594 0.97
15 25 0.18 14 7.0 5.0 1 23 600 622 600 622 0.97
16 25 3e-06 0.00023 22.0 2.2 1 23 628 650 628 650 0.99
17 25 0.013 1 10.5 1.0 1 13 656 668 656 669 0.93
18 25 3.5 2.8e+02 2.9 1.3 1 23 707 730 707 730 0.91
19 25 0.074 5.9 8.2 0.6 2 23 800 821 799 821 0.96
20 25 0.00016 0.012 16.6 0.6 1 23 825 847 825 847 0.98
21 25 0.0054 0.43 11.8 1.2 3 23 862 883 861 883 0.95
22 25 7.5e-06 0.00059 20.8 1.0 2 23 890 912 889 912 0.97
23 25 0.0077 0.61 11.3 3.5 1 23 918 940 918 940 0.98
24 25 1.9e-06 0.00015 22.6 1.8 1 23 946 968 946 968 0.99
25 25 2.4e-06 0.00019 22.3 1.2 1 23 974 997 974 997 0.98

Sequence Information

Coding Sequence
ATGCAAAGCGAGCCTACCGATCGCGCGAAGATTCTAACCAGGAAGAGACAGAAAAAGGATACACTACAGAAGATAGTGGCTTATTCTAACGCAACACCCGTACTTAAATGCAAAGGAATGTTCTACTATTGTTCTTATTGCGATGAGAGATTCCTTAACCCTGAAAAACTAAAGTTTCACTCTTTGGAAAGTCACCAGAATGATTTTATGAAATTGAATTGTTTAGCCGGAGAATATATCATTAAGATAGATATCACTGATCTTACCTGCAAGCTTTGCAGTACTTTCGTCTCATCAATAGAAGAGTTAATCAAGCATCTAACAGATGAACATGAGATAAAGTTTGAACCGATCGATTTTACTAAGTTCTTGATTCCTTTTAAGTTTAACGGTATGTTTCGTTGCGGGGTCGATACTTGCGATGCCTCTTTTAATACTTACCAAGGTGTTATTAAACATATGAATACCCATATAGCAAATTACGTCTGCGAAATTTGCAACAACTCTTACTCTACGAAAGTGGGTCTAGCGTTGCACGTTAAAGGTCATACTGGTGACAAACCCAAGAAGGCTTCACGAGTTAAAAGAATAAAATGTCCGCATTGCGATTTTATTTCCAAACATAGTCATGGGCATGGCATTCATATGAAAGAAATGCACGGTTTGGCGACGAATTTCAAATGCACGTCGTGTGATCGCGAATTTCAGAACAGCATGCACTTACGCGTACATGTAAAGCGCGACCACTTAATGGAAAGGAACCATAAGTGTCCGTTTTGCGAGAAGAGCTTTTTCTACAGGACGAAATTGAACAATCATTTGACGACGCATACAGGAGAGAGACGGTTCCAATGTCTTATCTGCGATAAAAGATTTAAAACTAAATACAATTTGACGATCCATAATCGAATACATACCAATGACAAGCGATATAAGTGTAGAGTTTGTGGTAAAGCATATGCTCAGAGGAGCTGGGTTAATGCTCATATTAAATCTAAACATGGCGAAGTGGAAATATTAGAACATTATTGCATTGAGGAAGATATGCAATGCCATCGATTGAAGTGGATATCGCTCAAACGCAAGAAAAAGGACACAGTCAAGCTGTTGGTGATGTACACAAATGCCAACCCTGTCCAAAAGATAAAAGAAATGTTTTATTATTGTAGCTATTGCGATGCCCGTTACCATAACCCAATAAAACTAAAAGTTCACACACAAGAAAAGCATAAATTTGAATTCCACAAGTACTTTATCTCACCATCTAAAGAGTTCTTAGTCAAATTCGACATTACAAACTTAACTTGCGACCTTTGTGATGCCGAAGTGGAATCAGCCGAAGAAATTATCAAACATTTAATAAGTCAACACGAAAAGAAGTTCCCCGTTGTCGATATCAATAGTTTTCTAATTTCCTTTAAATACATAGACAATATGCTCCGTTGTGCCTACTGCGATGCCTCTTTCAACACCTTCCGAAGACTCCAGATGCATATAAACAAGCATATGGCTAATTATACCTGTGAATATTGCCAAGCCACTTACAAGGAACGGAAAATATTCATTCGCCATGTCGAAACTCATACAGACAAAGTTAGAGTAAAGAAAAAGAGGTTATACGCTTCGAAATGTCAGCATTGCAATATGAGCTTCAACTCTTATGAAACAAAAATGGATCATTTAAGAGTAGCTCATGGGTTAGCAGTCACTCACAAATGTAACTCATGCGATCGCGTATTCACTTGTAATACCACTTTACGACGCCATGTCAAAAGAGACCACTTATTAGAAAGGAACTTTAAATGTTCTTTCTGCGAGAAAAGTTTTTTCTGCAACGTGAAGTTAACCAACCATCTTACAGTGCATACGGGAGAACAGAACTTCCAGTGTGAAGTTTGCCACAAGCGGGTAAAAACTAAAGGAACTTTGCGGGTCCATATGCGAATACATACAGATGGCAAGCAGTATAAATGTGAGAAGTGTGGGAAAGCATTTGCTCAGAAGAAAATACCTAAACAGAAGAATACTCAAGCAACAAATCTTCAAAAAAAGGATACAGTTACGAAGATACTCAGCTGGTCTAACGCAACCCCAGTACGAAAATCTTCAGGGTTATTTTACCACTGTTCCTATTGCGCTGCCAAGTTCCTTAACCCTATCAAACTAAAAGAACATACCGAGGAATTCCACAAACATGAGTTAGATAAATTCTACATCAGCCCGAGTCGTAGCTTTAAGATTAATTTAGACGTCACCAATTTGACTTGTCGAATCTGCAGTGGTATCCAATACTCTATTAAGGAACTTATAACTCATCTAATAGAAGAACATGAGAAGAAATTAGACTGTATTGATGTGGAAAAATTCGTTGTACCATTTAGATATGACGGTATGCTTCGATGTGTGTACTGCGAAGCTTCTTTTAATAGTTTTAACATATTCCAAGCGCACATGAATAAGCATTTAGCCAATTACTTCTGCGATATTTGCGATTCTACTTACTCATCCCTTGAAGGTTTGAAACAACATATAAAGAAACATAGTAAAAGAATGTCCGAAAAAAAGAGAACTCGCAATAACCTATGTCCACATTGTGGTCTAAACTTCACAACTAACACGTTAAAAGTTAAACACCTAAAAGCAGAGCATGGTTTGGAGTTAAAGAAGCAATGTAACTCTTGTGATCGTTCGTTTACAAACAGCTCTCAACTTTGGGTACATGTCAAAAGAGACCATTTAATGGAAAGACGGTTTCAATGCAATTTATGCGATAGGTCCTTTTTTTGCAAAGAAAAATTAGTCAATCATATGACCGTACATACAGGGGAGCAGAAGTACCAGTGTGATGTTTGTTCTAAAGGGTTTAAGTACAAGTATAATTTGACAGTTCATAAACGTATTCATACCAATGACAAACGATTTAAATGTCATATATGTGGGTTGGCGTACGCGCAGAACAGCTGGCTGAGGATGCATATGAAATCTAGGCATATTGAAGTACTACTGACATAA
Protein Sequence
MQSEPTDRAKILTRKRQKKDTLQKIVAYSNATPVLKCKGMFYYCSYCDERFLNPEKLKFHSLESHQNDFMKLNCLAGEYIIKIDITDLTCKLCSTFVSSIEELIKHLTDEHEIKFEPIDFTKFLIPFKFNGMFRCGVDTCDASFNTYQGVIKHMNTHIANYVCEICNNSYSTKVGLALHVKGHTGDKPKKASRVKRIKCPHCDFISKHSHGHGIHMKEMHGLATNFKCTSCDREFQNSMHLRVHVKRDHLMERNHKCPFCEKSFFYRTKLNNHLTTHTGERRFQCLICDKRFKTKYNLTIHNRIHTNDKRYKCRVCGKAYAQRSWVNAHIKSKHGEVEILEHYCIEEDMQCHRLKWISLKRKKKDTVKLLVMYTNANPVQKIKEMFYYCSYCDARYHNPIKLKVHTQEKHKFEFHKYFISPSKEFLVKFDITNLTCDLCDAEVESAEEIIKHLISQHEKKFPVVDINSFLISFKYIDNMLRCAYCDASFNTFRRLQMHINKHMANYTCEYCQATYKERKIFIRHVETHTDKVRVKKKRLYASKCQHCNMSFNSYETKMDHLRVAHGLAVTHKCNSCDRVFTCNTTLRRHVKRDHLLERNFKCSFCEKSFFCNVKLTNHLTVHTGEQNFQCEVCHKRVKTKGTLRVHMRIHTDGKQYKCEKCGKAFAQKKIPKQKNTQATNLQKKDTVTKILSWSNATPVRKSSGLFYHCSYCAAKFLNPIKLKEHTEEFHKHELDKFYISPSRSFKINLDVTNLTCRICSGIQYSIKELITHLIEEHEKKLDCIDVEKFVVPFRYDGMLRCVYCEASFNSFNIFQAHMNKHLANYFCDICDSTYSSLEGLKQHIKKHSKRMSEKKRTRNNLCPHCGLNFTTNTLKVKHLKAEHGLELKKQCNSCDRSFTNSSQLWVHVKRDHLMERRFQCNLCDRSFFCKEKLVNHMTVHTGEQKYQCDVCSKGFKYKYNLTVHKRIHTNDKRFKCHICGLAYAQNSWLRMHMKSRHIEVLLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-