Iave001890.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- -
- Assembly
- GCA_907269075.1
- Location
- OU026112.1:2379379-2384664[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 1.2 94 4.4 2.5 3 23 2 22 1 22 0.97 2 28 0.0067 0.53 11.5 0.3 3 23 48 69 46 69 0.96 3 28 0.002 0.16 13.1 2.6 2 23 92 113 91 113 0.97 4 28 4.5e-06 0.00035 21.5 0.1 1 23 117 139 117 139 0.98 5 28 0.0032 0.25 12.5 2.1 1 23 173 196 173 196 0.95 6 28 0.048 3.8 8.8 0.9 1 23 202 225 202 225 0.94 7 28 0.95 75 4.7 0.2 2 23 315 337 314 337 0.95 8 28 0.00074 0.058 14.5 2.8 1 23 359 381 359 381 0.95 9 28 0.00064 0.051 14.7 0.1 2 23 386 407 385 407 0.96 10 28 0.00029 0.023 15.7 1.3 1 23 415 437 415 437 0.98 11 28 0.0062 0.49 11.6 3.0 1 23 442 465 442 465 0.95 12 28 0.25 20 6.5 2.3 1 23 471 494 471 494 0.97 13 28 1.3e-05 0.001 20.0 0.3 1 23 500 522 500 522 0.98 14 28 2.8e-06 0.00022 22.1 2.6 1 23 528 550 528 550 0.98 15 28 1 80 4.6 0.1 2 23 661 683 660 683 0.92 16 28 5.3e-05 0.0042 18.1 1.5 1 23 705 727 705 727 0.98 17 28 3.7e-05 0.0029 18.5 0.8 2 23 732 753 731 753 0.97 18 28 0.0033 0.26 12.4 4.3 1 23 757 779 757 779 0.96 19 28 0.2 16 6.8 2.9 1 23 783 806 783 806 0.92 20 28 3 2.3e+02 3.1 0.1 2 23 893 915 892 915 0.91 21 28 0.0036 0.28 12.3 3.1 1 23 937 959 937 959 0.95 22 28 3.1e-05 0.0024 18.8 2.4 2 23 964 985 963 985 0.97 23 28 0.00034 0.027 15.5 0.8 2 23 996 1017 995 1017 0.96 24 28 0.026 2 9.6 2.9 2 23 1023 1045 1023 1045 0.95 25 28 1.3 1e+02 4.3 0.7 1 23 1051 1074 1051 1074 0.82 26 28 0.00013 0.01 16.8 0.1 1 23 1080 1102 1080 1102 0.98 27 28 7.7e-06 0.0006 20.7 2.5 1 23 1108 1130 1108 1130 0.98 28 28 0.0014 0.11 13.6 5.4 1 23 1136 1158 1136 1159 0.95
Sequence Information
- Coding Sequence
- ATGTGTGCCTATTGTCCAAAAATCTGTGTTAGCATCCACGAGACCAGATTACACACACAAACTCATAACAGACTCGATATATTTGAAAATCCACAAGTGAGACAAATATTCCCGCTGAAAGTTGATATTTCTGATCTGGCTTGTACTATCTGTGATCTGAAAATAAGAAATTTTAATGATTTAAAATCACATTTGAAGACTGCTCATGAAATAATTATTAATAGTACTTACACTGACGGCGTCATACCTTTCTCTTTAACTGACAAGGAGTTAAAGTGTACCGTTTGCGATCTCCATTTCGATAGATTCATGACACTATTTGTCCATATGAATAAACATTACCAGAGTTACGTTTGTGATATATGTGGGAAGGCTTATTCTAGCCAGCAGAAGTTGAGGGCTCACACAGCAATGCATGAAACAGGTGACTTTGCCTGTAGCCAATGTGATGCAGTGTTACCCAATCGCGTTGTGAGACATAGGCATGTCAACGACGTTCACGGACCTAAAGAGAGATACAGGTGTCCGATATGCGATGAACATTTTGATTCCTACCACAGTCGCATGAAACATTTAGATATTATTCACGGAGAGAAGACTGAGTACAAGTGTGGATATTGTCCGGCTGTTTTTATCAGTTGCACGTCTAAATACTCGCATATACAAGGCGTCCATTTAAAAAAGCGAGTCAGCAACCTCGATAAGAAATGGAAATGGGTTCGCAAGCATTACGATCATAGGGACAATGCTGCCATCATTGTCGAATGTTCAAACGTCACTCCATTCAAATGGAAGAGCGGATGCTTCATTTGCGCTTACTGCTCTCTATCCTCAGCAGATTTCGATGTCATAAAAGAACATATACTAACCAAACCGCATAAAACAGATTCGTCGACAAATTCTCGTAACAAAATCTTTCTCAAAGTAGAAGTAACCGATCTTAAATGCGAGCTCTGTTCTAAAAATATGCCAGACGTCGAAGAGCTGTTCGAACACCTATTAAAAAAACACGATAAGCCATTAATTAGAGAATACGGTATCGGCGTGATGCCCTTCCTACTAACAGGCCCAGAATATAGTTGCATTAAATGCGATGAGTCTTTTAAACACTTTACCAATTTGAATAGGCATGTCAACATTCATTATCCGAATACTACCTGCCCCTTATGCGGGAAATCGTTCGCCGATTCAAATAGAATGGATGCTCATGTGAAAATACATGAAACTGACGCTAACGAGCTGTTTAAATGTCCAAAATGCGACGAGTTTTTCCCCACGAGATATGAAAAGAACAAACATGTTGCTAAGCACAATACTTTCAAACATCGTTGTCCATACTGCAGTGAAGCTTTTAAGAGTTACTCTTCAAAGTTGAATCACTTAAAAGAGTTTCATGGTAAAAATATCAAGTACCCCTGTAACTTCTGTTCGTCCGTCTTCGCGATGTGCAATCAGAGAACGAAACATATCCGCCAGGTCCATATAAAAAAGAAGACGTTTGTTTGTGAACTCTGTCCTTACGCTTTTGTAACACATGCTCAATTACGAGCTCATATGATTAGGCATGGAGGGGAGAAGAAACACCAATGCCAAATATGTAAGAAGGCATACGCTAGAAAATACACTTTACGCGAACACATGCGGATTCATGAAAACGATAGACGATTTAAGTGGGAAAGTGAAAGCGGTTTATTCCCAACTGGGCACCTTCCCGACCCGGCACCCCAAAACACCCCCGACTTGCGAAAATCGATAATCAAGCATAATGATCATAGGGACAATGCCGCTATCATCGTAGAATGTTCAAACGTCACTCCATTTAAATTGAAAAATGGTCGTTTCGTTTGCACCTACTGCCCAATTATATCACCATTATTTAGCGTAATAAAGGAGCACGCGTTAACCGAATCACACAATAAAATTTGTGCTAAGACCATTTATGATAAGAGATTCTTTCTTAGAGTAGAAGTAAGTGATCTTAAATGCGAGATTTGCTCCGAAAGTATCCAAGATACTGAAAAATTGTTCGATCATCTAATAGAGATACATAACAAACCACTTGTTAGAGAGTACGGTGTTGGCGTTATGCCTTTCTTGCTGTCAGGTCCTAAATACAGTTGCATGAAATGCGATAAGATTTTTAATAATTTTACCAGTTTGACCCGACATGTTAACATTCACTATGCTAACACTGTCTGCTCGTTGTGCGGGAAGTCCTTTTCCGATACAAGAAGAATGGAAAATCATATGCGAATACACGAATCGGGGCATAAATGTTCTAAATGCGACAAGTATTTCTCTACAAAAGAGGAGAAAAAGAATCATGCCGTGACGCACCAATTTAAACACCATTGCCCACGCTGCAATGAAGTTTTTAAGAACTACACTCTCAAATTAGATCACTTAATAAAAATTCATGGACAAAACAAGGATGATATGAAATGGAGTTTGGTACGCAGGCATTACGATCATAGAGACAATGCCGCCATCATTGTCGACTGCTCAAACGTCACTCCATTCCGGTGGAAGACCGGATTCTTCTATTGCGCGTCCTGCGAGCTAGCATCAGCTGAGTTCGATGTCATAAAACAGCATACGTTAAACAACCAGCATCAAACTGAGTCTAGATCAATATTTAATAAACAAATATACCTCAAAGTCGAAGTAACTGGTCTTAAATGTGAGCTCTGCTCCGAAAGTATTGAAGATATCGAAAAATTGTTTGAACATCTAATTGAACAACACAATAAACCGCTTATTAAAGATTATGGCATTGGGGTTTTACCTTTCGTTATATCAGGTTCGGAATACAGCTGCATAAAGTGCGATGAGACTTTTAAGTTTTTCAGCCACTTGAATAAGCACGCTAACGTACATTACCCGAACACTGTTTGCCCTTTATGCGGCAAATCCTTCGTGTACAGACACAGGATGCAAACGCATATGAAAACTCACGAAGTTGATGGGATGGGGTCTGAACAATTGAAATGTCCAAAATGCGACCTGACTTTCACTACAAGATACGAAAGAGCAAAGCACGTTGCTAAACATAACATCTACAAAAACCGTTGTCAATACTGCAACGAGTCGTTTAAAAGCCACCCTGCAAAACTGAAACATCTAAGAGAGTTTCATGATAAAAAGATCAACTATCCTTGTACCTATTGTCCGGCTGTTTTCGGTGCTTGCAATTTTAGAACCAAGCACATTGCTCAAGTGCATAAAGTTGAGAAATCTTACTCATGTGAACTTTGTCCTTTTGCTTCCGTAACATCGTCTCAACTTAGAGCCCATATGATTAAACATAGTGGGGAAAAGAAACACCAATGCCAAGTTTGCAAAAAGGCGTACGCTCGCAGATATACACTACGCGAACACATGCGTATTCATGAAAACGATAGACGTTTTGCGTGCATGTATTGCAACAGTGCTTTTGTCCAAAAGTGTAGCCTCAAAAGCCATATGAAAACACACCATCCGCACGAACCGATGGAACCTTTGCTGGATCTTAAACCTTTTGAGAAATTGGAAGATCATTTACCGCCCCCAACTTTATAA
- Protein Sequence
- MCAYCPKICVSIHETRLHTQTHNRLDIFENPQVRQIFPLKVDISDLACTICDLKIRNFNDLKSHLKTAHEIIINSTYTDGVIPFSLTDKELKCTVCDLHFDRFMTLFVHMNKHYQSYVCDICGKAYSSQQKLRAHTAMHETGDFACSQCDAVLPNRVVRHRHVNDVHGPKERYRCPICDEHFDSYHSRMKHLDIIHGEKTEYKCGYCPAVFISCTSKYSHIQGVHLKKRVSNLDKKWKWVRKHYDHRDNAAIIVECSNVTPFKWKSGCFICAYCSLSSADFDVIKEHILTKPHKTDSSTNSRNKIFLKVEVTDLKCELCSKNMPDVEELFEHLLKKHDKPLIREYGIGVMPFLLTGPEYSCIKCDESFKHFTNLNRHVNIHYPNTTCPLCGKSFADSNRMDAHVKIHETDANELFKCPKCDEFFPTRYEKNKHVAKHNTFKHRCPYCSEAFKSYSSKLNHLKEFHGKNIKYPCNFCSSVFAMCNQRTKHIRQVHIKKKTFVCELCPYAFVTHAQLRAHMIRHGGEKKHQCQICKKAYARKYTLREHMRIHENDRRFKWESESGLFPTGHLPDPAPQNTPDLRKSIIKHNDHRDNAAIIVECSNVTPFKLKNGRFVCTYCPIISPLFSVIKEHALTESHNKICAKTIYDKRFFLRVEVSDLKCEICSESIQDTEKLFDHLIEIHNKPLVREYGVGVMPFLLSGPKYSCMKCDKIFNNFTSLTRHVNIHYANTVCSLCGKSFSDTRRMENHMRIHESGHKCSKCDKYFSTKEEKKNHAVTHQFKHHCPRCNEVFKNYTLKLDHLIKIHGQNKDDMKWSLVRRHYDHRDNAAIIVDCSNVTPFRWKTGFFYCASCELASAEFDVIKQHTLNNQHQTESRSIFNKQIYLKVEVTGLKCELCSESIEDIEKLFEHLIEQHNKPLIKDYGIGVLPFVISGSEYSCIKCDETFKFFSHLNKHANVHYPNTVCPLCGKSFVYRHRMQTHMKTHEVDGMGSEQLKCPKCDLTFTTRYERAKHVAKHNIYKNRCQYCNESFKSHPAKLKHLREFHDKKINYPCTYCPAVFGACNFRTKHIAQVHKVEKSYSCELCPFASVTSSQLRAHMIKHSGEKKHQCQVCKKAYARRYTLREHMRIHENDRRFACMYCNSAFVQKCSLKSHMKTHHPHEPMEPLLDLKPFEKLEDHLPPPTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -