Iave025779.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- -
- Assembly
- GCA_907269075.1
- Location
- OU026088.1:13023489-13023863[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-08 3.6e-05 24.0 0.0 18 40 31 53 21 57 0.89 2 2 0.47 2.9e+02 1.9 0.0 25 34 110 119 106 123 0.85
Sequence Information
- Coding Sequence
- ATGCCGAGAGTACGCGTAAGAAAGACTTCGAGAGGAAAAATAGACATGTCAAAGTACAGCGACGCTTATGAAGAGGTGAAAGCAGGTAATTCATTACGAAAAGCGGCAGAAAAGTATGGAGTAAACCACTGTACGCTCCTAAGATATATTCGAAAACGAGATGCATCTGGTGAGGACCACAATAAACTCATTGGATATAAACCACATAACCGAGTGTTTAATGAGGAGCAAGAGCGACGCCTTTCAGAGTACTTGATTCAAAGCGCAGATATATTGTTTGGTTTACCAAAGATAGAGGTAAGAAAATTAGCCTATGAACTTACAGTTTTATATAATTTACCACGACCCACTTTCGAGGTCGTGAGCAAAAGTTAG
- Protein Sequence
- MPRVRVRKTSRGKIDMSKYSDAYEEVKAGNSLRKAAEKYGVNHCTLLRYIRKRDASGEDHNKLIGYKPHNRVFNEEQERRLSEYLIQSADILFGLPKIEVRKLAYELTVLYNLPRPTFEVVSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -