Iave016158.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- bab1
- Assembly
- GCA_907269075.1
- Location
- OU026083.1:26411045-26414123[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-17 1.3e-14 54.2 0.0 1 43 31 74 31 76 0.95
Sequence Information
- Coding Sequence
- ATGCAGTCGCTGTGGCAGCAATGCTGGAGCACAAACCAGAACATGGTCCACAACCTGCGGCTCCGAGAGCGCGGCCCACTCAAGTCTTGGCGCCCTGAGACCATGGCCGAGGCGATTTTCTCCGTGCTCAAGGAAGGCTTGTCGCTCTCTCAAGCGGCTAGGAAGTACGATATACCATACCCGACGTTCGTGCTCTATGCCAACCGCGTGCACAACATGCTCGGACCAAGCGCTGATGGTGGAGCAGATCTGAGACCGAAGGGAAGGGGACGTCCACAGAGAATATTGTTGGGCTCATGGCCGGACAATCACATCCGTGGCGTGATCCGCGCCGTCGTGTTCCGTGAGAACCACTCCGCACCGCACCCACAACAGCACCTACGCGAGATGGAAATGCCTGTCTACCCCGCCATCACGGACGGCACAACCACTGGCACCGTAGGTGGGAACGGTTGCGGAGGCGGCGGCGATGGACGCGAAGGACACGTCTCCCCGAACGCAGCGGCCGCCGCAGCCGTGGCTGCTGTCGCTCACAATCTGCGCCGATCAATGTGCAACATGGTGGTTGCGGCGCAGCGGCCTGCGGAACACGGCGTGCACGTTACGATGCCCTCGCTGCCGCTGCACTCTCCGCGCCTGGCGTCTCCGCTGACCGCCGGGCTCGAGTCCCCGCTGTGCTCGCCCCCACCGCCGCCGGGGCATGAAGCGGCTCGCCCCGCTGATCCGTTCCGCCCGTTCGCGGACCCGCCGCCGGAACGGCACGCGCCCGGAGGGCCCCACGAGATGGGCCCGCCTGAGACACCGGTATCACGTAACAACGGACAAGGTGCCTCGCCACTCGAGGCCGGCTCCCCGCCGGTCATCTGA
- Protein Sequence
- MQSLWQQCWSTNQNMVHNLRLRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGSWPDNHIRGVIRAVVFRENHSAPHPQQHLREMEMPVYPAITDGTTTGTVGGNGCGGGGDGREGHVSPNAAAAAAVAAVAHNLRRSMCNMVVAAQRPAEHGVHVTMPSLPLHSPRLASPLTAGLESPLCSPPPPPGHEAARPADPFRPFADPPPERHAPGGPHEMGPPETPVSRNNGQGASPLEAGSPPVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837399; iTF_00835471;
- 90% Identity
- iTF_00837399; iTF_00835471;
- 80% Identity
- -