Iave008695.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- -
- Assembly
- GCA_907269075.1
- Location
- OU026094.1:13092975-13101742[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-08 7.8e-06 26.1 0.1 1 44 14 57 14 58 0.93 2 4 1e-14 6.3e-12 45.6 0.1 1 37 88 124 88 131 0.89 3 4 8.3e-12 5.2e-09 36.3 0.2 1 39 152 190 152 195 0.92 4 4 2.6e-10 1.6e-07 31.5 0.1 1 43 237 279 237 281 0.93
Sequence Information
- Coding Sequence
- ATGGGATCGCGCAAACCTCATCGAAGATACGGCCTATGGACTGAAGAAGATCTACAAGCTGCCATAACTTCGATAAAAACTAAAGAAATGACGGAGAGCAGAGCTGTAAAATTTTATGGAATATCTCAACCAACAATTCGACGCCATATGCAATCTGGTAGCACAGTGAAAAAAATGGGAAGGAGCGCTATTTTCACTCAAGAAGAAGAAGAGAATTTTGTCATAAGTTTGTTCCAACTTCCTCGGCGACGCGCCCAATGGACAGAGGAAACTCTCCAAGCTGCTTTAACAGCGATACAAACAAAAAAACTAACACAAAGAAATGCTGCTAAACATTATGGTATACCAAGATCAACACTTAGTAACCATATTCTTTCTGGTAGCACAGAGAAAGTTATAGGCAGGAAAAATCTTTTAAGTTTACACCCAATACGGCAGAAACGTGCTCAATGGACAGAAGAAACTCTTCAAGCAGCTTTAAGTGCAATTAACACTAAGGAACTTACAGCGGCAGAAGCTGCTAATGTTTATGGTATACCTAGACAGACGCTGCAAAATCATATCAAATCAGGTAGTGCACAGAAAGTTATGGGAAGAAAGTCTCTTCTTAATCAGGAAGAAGAAGAGGAGTTTGTCGAAGAGCTGTTCGGATTAAAAGACAGTAGTACACAACTGACTAATTTGCGCCAACTACGTCTGAGACGATGGACGGAAGAAACTCTTCAAGCTGCTTTAAATACTATCAAAACTAAGGAACTAACAGTGACAGCGGCTGCCAAATTTTATGGTATATCTAGAAGAACTCTCCAAAAGTATATACAATCAGGTGGTGGTAAAATGAAAGGAATAGGAAGGCAGTCTCTTCTTAATAAGAAAGAAGAAGCGGATTTTGTCAAAGATCTGATAGGATTTAAAGACAGTGGCACACCACTGACTAGTGTTTTTGTACGACGGCAAGCGTTTCTTTTTTCCAAAAAATACAAGAAAAAGATAAGACTTGAAAACCAAAGGACTGGTTTGATTGGAAAAGATTGGCTCAGATGTTTTCTAAGAAGACACCCTGAAATTAAAATTGACAGTTTAAAGAAGGCCGTACAATCGAAAATTGGTGAAACTGTGAATGTCGAAAAACCCTAA
- Protein Sequence
- MGSRKPHRRYGLWTEEDLQAAITSIKTKEMTESRAVKFYGISQPTIRRHMQSGSTVKKMGRSAIFTQEEEENFVISLFQLPRRRAQWTEETLQAALTAIQTKKLTQRNAAKHYGIPRSTLSNHILSGSTEKVIGRKNLLSLHPIRQKRAQWTEETLQAALSAINTKELTAAEAANVYGIPRQTLQNHIKSGSAQKVMGRKSLLNQEEEEEFVEELFGLKDSSTQLTNLRQLRLRRWTEETLQAALNTIKTKELTVTAAAKFYGISRRTLQKYIQSGGGKMKGIGRQSLLNKKEEADFVKDLIGFKDSGTPLTSVFVRRQAFLFSKKYKKKIRLENQRTGLIGKDWLRCFLRRHPEIKIDSLKKAVQSKIGETVNVEKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -