Ipur025890.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Icerya purchasi
Gene Symbol
L
Assembly
GCA_952773005.1
Location
OX731680.1:418110290-418130320[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 4.7e-06 0.0025 20.1 0.3 1 23 10 32 10 32 0.98
2 20 0.00015 0.078 15.4 1.7 1 21 50 70 50 72 0.95
3 20 0.19 97 5.7 0.5 3 23 96 118 94 118 0.88
4 20 0.0059 3.1 10.4 3.8 1 23 175 198 175 198 0.96
5 20 8.7 4.5e+03 0.4 0.6 2 23 227 249 226 249 0.87
6 20 0.00086 0.45 13.0 0.3 3 23 345 365 344 365 0.98
7 20 0.038 20 7.9 0.3 1 23 390 412 390 412 0.92
8 20 0.0027 1.4 11.5 0.2 3 23 422 443 420 443 0.93
9 20 0.0049 2.5 10.7 0.1 1 23 448 471 448 471 0.92
10 20 2.7 1.4e+03 2.0 0.8 1 23 478 504 478 504 0.85
11 20 0.011 5.9 9.5 0.9 2 23 527 548 526 548 0.97
12 20 0.021 11 8.7 1.3 1 23 552 575 552 575 0.96
13 20 2.2 1.2e+03 2.3 0.2 2 23 637 660 636 660 0.81
14 20 6.6 3.5e+03 0.8 0.8 2 23 727 750 726 751 0.79
15 20 9.1e-06 0.0047 19.3 2.6 2 23 763 784 762 784 0.96
16 20 0.24 1.3e+02 5.3 0.4 1 23 794 816 794 816 0.95
17 20 1.9 9.6e+02 2.5 2.2 2 23 824 845 823 845 0.96
18 20 0.0044 2.3 10.8 0.3 1 23 932 955 932 955 0.96
19 20 0.042 22 7.7 1.1 1 23 959 981 959 981 0.97
20 20 0.016 8.4 9.0 0.2 1 23 987 1009 987 1009 0.96

Sequence Information

Coding Sequence
atgaAGACACATGACAATCAAAAGCCATTTCAGTGTACCATATGCAATCGAGGTTACAACACTGCAGCTGCTCTGACGTCCCACATGCAGAATCATAAAAAAGTGTTGGACAATATTCCGCCGGTAACTGCTGCGCCCGGGACCACATTcaagtgtctgcaatgttcggAAGTGTTCAAAAAACCGGAAGAGCtacaaGCTCACATGAACTGTCACCCTATATCCGAGAACGGCACCCAGTCAAACGGCAGAAGTTCTAAATCGTCATCTTCAGTGAAACTGAACTGCTCGTACTGCTCCAAAGATAACTTCACCAACATGGAAAGTTTACAATCGCACATACAATCCGCTCACAAATCGGCTATAAATGGCAATGCGCCGAAAACCGAATTAAACCGCAACAACAGCCCAAATAATCAAGCGTCCAAGTCGCACCCACTAACAACTGGTTCCTCGACGTCTCCGGCATCCGTGTTCAGCTCGTCGCTACAACAGTCCTCGATCGCTTCCTCCTCATCCTCTTACTACTGCGAATTGTGCACGATGCAGTTCTCGTCGTTGCACGCTCTGCACAAGCACACCAGCTCCGTACACGCAGCCCTATACAACAACAATAACGAGAGTGCCGCATTCTTCAGGTACGCGCTACCGTCCGATTTGATCCACGAAGGCAAACTTTATTGCGTCTACTGCGCCACTCATTTCCTGACTCCGGCCTCGTTCGCCGAACACTATATTTTCTTCCATAGCCCTTATCAGCCGCACTTTCTCGCCATTAATCAACCGCCGGCGTTGGCAGTAGCGGCTGCGGCCGCGGCAACTTCGGAGCAGATAAAACCGACTGATCTGTCCGTTTCAAGCAGTAAAAAATCACCTAAGCGGGCAGCCACCCTTGAAGAATCCATGTCGTCGCCTAGAAAGAAATCGCAAACTCCGAATAACGACGGTTCACCCAGCGGAAGTTCATCCAGTACTCCGCATTCGAATAGTTCCTTGGCTCAAAACCACTACAGTTATCCCGGGACGCTGTTGTGTAGTCAGTGTAACGCGGCATTTAGCGACTTTGAATCGTTTCGAGCGCACATTAAACTGCACATCGAAGAAACCAGCAATAGCGGTCTGCTCGGTAGATGCAATACGCTGGAACCGTTGAAAATGCCGATGGAATTTGCTTGTCCGCATTGCCGGTCGGTGTTTTCGTCAGTCGAGGAAATCAATCAACATGTGGTCAACCACTTTTTGTCCAGCGGTATGGAATTCGGTTGCGGAAGTTGCAACAAAATGTACGGAAAACCGGACGACCTGCAAAAGCATTTGATGGACATGCATTCGCATCACCTGTACAGCTGCACCATATGCAACGAAATATTCGAGTCGAAAGTAACCATACAGGTGCATTTTGCAGTCACCCACAGCGTTCaaacgaaaatttataaatgtaacgtGTGCCTTTCGCCGAATGCAGTATTTCACACGGAACTGGAATTTTTGGCGCACATCAGATCCGTCCATTCACACAACGCGCTCTTATCGACCACCTCTGCATTCCAGCCATTAAACaattcgTTAATACCGTTACAGTGCTCAATATGTCACTCAAATTTTCAAACGGAACTAGATTTACAGTTACACTTGGCTACACACGGTAAACAGTTTCAGTGCACGCTGTGTGCGCAGTCATTCCATATTGAATACTTACTGGACAAACACATGCAACAGGTTCATCAAAACTGCCAAGTAATAAAGGTGGAAAATGACGGTTACGACGATAAACAATCACCTAATAAAATGTACTCGCAATCCAAATCGCCGTTAATGCGACAAGACGTAgtcaatttgaaaaaacacgaaccgaacaataacaataacatcgaGAGCGGTAGCAGTAACGGAACGAACAATTTAACATACTGCGACATATGCGAGAAAAGCGAATTTATCAGTGAATTTGAATTGATCACTCACAAAAAACTAATTCACAATATAAAAGTTCAATCATTAAACCataagATGTTAAATGAAACTTCGAACGCCGAGTGTAACAGCGCAGATACGGGCGCTGCAAAAAATCTGTCTAGACTTGCTCAAAAgtgtaatttactaaaaaataagtCGGATTCTTCGAATAGCAGCAGCAGTAGCAGCAACGATCAAATCGACAATGTAAATAACGTCATCTACTGCGATATCTGCGAGAAAAAAGACTTTCTTAGTGAATCCGAGCTTTCTTCGCACAAAAAATTAGTTCATCATACAAAGGTCGGCTCGCCCGGAAAGGTTAGCTTGAACTGTGCATACTGTAATGAAACGTGCAAGTCGAGAAGCGATTTAGAAAATCACATGAAAACACACTCACATAATTCAACCACTTCCGGTAAACATAAATGTATCATATGTGACGAGATGTGTCCAACTGCCGCCGTTTTAGCAGAACATAAACTAACTCACTGCAAGGTACTCTCCGGCAAAACCTGTATGCACTGCAAAGGATCGATAACGACGGAAGAACAATTCTACTACCATATACAACAACACAGCAGCATTACAACACATAGTAATCAGAATGCCGGGAACAATAGTAATGGCGCTAAACAACTGATGCTTCCGACTGTGTGCGTAATCTGTCGTCAGACGTTAGTATCTGACATGGAAACGAGAATGCATGCTCGTTTTCATTTAAGACAATCTCCCGATACCGTACCCTGCTCAGTATGTTTGCAAATGGTTGACAAGCAAGAACTAGTGGTCGGCATATGCAAAGAATGTTACCAAAGGCACGGAAAATCGTCTCCATTTCGATGCCCAGAATGTCATCTGAAATTTGAAACTGGCACAGCCATTGAAATACACCTGTCAACTGTTCATCGGAAACTGTATCAGTGCATTAAGTGTCAACTCTCATTCGACAACGAAAAAGAAATTCAGCACCACGTCGCGACTCACCTAATGATCGACGGTCACGAATGTCGATTATGTAGACGCGTATTACCAACGCCACTACAGCTGCAAGCACATCTCATCGAACACACTTCGGATACAGTAGTGGACCAGCTACTATTTCATCGGACCACAGATGTACACTAA
Protein Sequence
MKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKVLDNIPPVTAAPGTTFKCLQCSEVFKKPEELQAHMNCHPISENGTQSNGRSSKSSSSVKLNCSYCSKDNFTNMESLQSHIQSAHKSAINGNAPKTELNRNNSPNNQASKSHPLTTGSSTSPASVFSSSLQQSSIASSSSSYYCELCTMQFSSLHALHKHTSSVHAALYNNNNESAAFFRYALPSDLIHEGKLYCVYCATHFLTPASFAEHYIFFHSPYQPHFLAINQPPALAVAAAAAATSEQIKPTDLSVSSSKKSPKRAATLEESMSSPRKKSQTPNNDGSPSGSSSSTPHSNSSLAQNHYSYPGTLLCSQCNAAFSDFESFRAHIKLHIEETSNSGLLGRCNTLEPLKMPMEFACPHCRSVFSSVEEINQHVVNHFLSSGMEFGCGSCNKMYGKPDDLQKHLMDMHSHHLYSCTICNEIFESKVTIQVHFAVTHSVQTKIYKCNVCLSPNAVFHTELEFLAHIRSVHSHNALLSTTSAFQPLNNSLIPLQCSICHSNFQTELDLQLHLATHGKQFQCTLCAQSFHIEYLLDKHMQQVHQNCQVIKVENDGYDDKQSPNKMYSQSKSPLMRQDVVNLKKHEPNNNNNIESGSSNGTNNLTYCDICEKSEFISEFELITHKKLIHNIKVQSLNHKMLNETSNAECNSADTGAAKNLSRLAQKCNLLKNKSDSSNSSSSSSNDQIDNVNNVIYCDICEKKDFLSESELSSHKKLVHHTKVGSPGKVSLNCAYCNETCKSRSDLENHMKTHSHNSTTSGKHKCIICDEMCPTAAVLAEHKLTHCKVLSGKTCMHCKGSITTEEQFYYHIQQHSSITTHSNQNAGNNSNGAKQLMLPTVCVICRQTLVSDMETRMHARFHLRQSPDTVPCSVCLQMVDKQELVVGICKECYQRHGKSSPFRCPECHLKFETGTAIEIHLSTVHRKLYQCIKCQLSFDNEKEIQHHVATHLMIDGHECRLCRRVLPTPLQLQAHLIEHTSDTVVDQLLFHRTTDVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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