Ipur013573.1
Basic Information
- Insect
- Icerya purchasi
- Gene Symbol
- -
- Assembly
- GCA_952773005.1
- Location
- OX731680.1:217964102-217968520[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.027 14 8.3 0.1 2 23 601 623 600 623 0.93 2 18 0.84 4.4e+02 3.6 0.0 1 23 630 652 630 652 0.93 3 18 2.4 1.3e+03 2.2 0.0 2 23 730 751 730 751 0.93 4 18 0.34 1.7e+02 4.9 1.0 2 23 760 781 760 781 0.94 5 18 0.027 14 8.3 1.3 1 21 793 813 793 814 0.94 6 18 0.057 30 7.3 0.6 2 23 820 841 819 841 0.94 7 18 1.2 6.1e+02 3.2 2.4 2 23 850 872 849 872 0.92 8 18 0.0003 0.16 14.5 0.2 2 23 878 899 877 899 0.96 9 18 8.6e-05 0.045 16.2 0.6 1 23 905 927 905 927 0.97 10 18 1.9e-05 0.0099 18.2 1.2 1 23 933 955 933 955 0.97 11 18 0.0078 4.1 10.0 3.2 1 23 1066 1089 1066 1089 0.97 12 18 6.4e-05 0.033 16.6 0.7 1 23 1099 1121 1099 1121 0.98 13 18 0.026 13 8.4 3.0 1 21 1150 1170 1150 1174 0.92 14 18 0.00015 0.078 15.4 1.3 1 23 1187 1210 1187 1210 0.95 15 18 5.8e-05 0.03 16.7 1.8 2 20 1281 1299 1280 1301 0.93 16 18 0.0055 2.9 10.5 0.9 3 23 1316 1336 1314 1336 0.97 17 18 0.00072 0.38 13.3 2.4 2 23 1364 1385 1363 1385 0.97 18 18 2.2e-05 0.012 18.0 3.7 1 23 1390 1412 1390 1412 0.99
Sequence Information
- Coding Sequence
- ATGGCTTACTCGTATGCCGGTGACGAAACGCACTGTCTGGAAGAACTGTTGCAGGCGAGCAATATGGAATATAACGGTAACATGATCATTCCACGAGCGGCACTGCTGACGCCATCCTCGATAGTTCCTTTTATGAGTAACGTCTGCTGTATTTGTTACTCTAACACGGCTAATCAGTATGTCCATTTATCGGATAGTTTTATAAACGCGTCTCCATTGCCCCTCATGCCGACCAATCAGTCAAACAGTATGTGCAGCGCCTGCGTTGGAATGCTGGGTTTAAACAGTGTTCttcaacagcagcagcagcagcagcagcagcaacagaATTTCAATAACGTTCTGGTAAATGCAAACTATTATCAGCAGCACGAGCTTGACAGTGCCAACGGCGGAAACAATTCGCTAATGAACATCGGCTTGTCGAATTACTGCGATCACGGCCATGAACAGTCGCAGCAGATGATTGGAGCAGCTTTTATGCCGTTTGGAAACGGAACAGCGACCGGGCAACCGTACACTAATGTTACCTCGTTCGTCGGAGGAGGTACCGGAATGCAGGCGACTAGAGAATACGAGTTCGCGAATCAGCAGTTGGCGAACGACCTGTCGGACGTTGAGATATCGGATATTTTCTCGTTGAACGAAATAACGGTGTCGGACGAAGACATTACATTTATAGCTAATTCGCTGGACTTAAACGAGGCTCCGGTAGTGATTTTAGACAGTAGCGGCAGCGAAAGTAGCTGCAGTAGCGCCAGCGGCAGCACGAGTAACCGTAACAGCCTGGAATTGATCGACAATAATAGCAGTAGCGTTCACAGTATTAGCAGCGCCAGCGACGGCAGCAGTAGTACCAACGGCAGTAACATGAACATCGAAAGCGAATACTCCTTATCACCGCAGCTGTCTCATCGTCTTACGGCCTCGGTGTCGGTTAACGGAATTGCCGACGTGCCGAATCGTCGTTGCTACTTAAATAACGGCGCGCAGCCTCTGATTGTCGGACAAAGCGGCAACGGCGACCGAAACGGCCTGCTTTCGAAGGAAGAAGCGGACGACGACGAACATAATATGCGCTCGGAAACGGACCGGCTACCGCTGCGAAGCGGTCAGTATAGAGCAACTGCACCGCCGGAACTCGCAGAGGATAACAGCGAAATGGGTGCCGTCGAACAAAAGCTGCAGCAAAACACGTTGCAACCGCTGCTGTCGCCGATGGcagttaataaattagaaattaacgACGTCTGGTCGGAAGCAGCGGATGCGGCCAGCGAACGCGGCAATTTCGAAGAAAACGACCGCTATACGATATTAAACCATCCGGTAGCGGACGAGGAATGGTCGTCGTCGGTAGCCGTAACTGATCGAAGATCGGATTACGAGTGGCCAACGGCGTCGTCGATGTCGTCGTCGTCGACAACGGGAGCGCTGCTAATCGCCGAGCAGCGGAACTCGCTGAAATTGACGGAACATCCGTCGACGCTGAAATTCGAAGCGATCGACGAACAAGTGCACGACGACGCGTCCACCGATCGATGGTCGTACGACGATGCGCAACTGGCATCCGTGGAACAATTACAAACGTTCGCCGTAGATAGTAATAATCGTAGTACGGCCGTTGTTCAGAAACGGCGCGGTCGTCCGAGAAAAAAATTGGTCGCCGATACGATAAGCGGCGGCGTGTTCGGTAGCGACCATCGTAAACCGCGCGGCCGACCGAAAGGTGTACTGAATCGTATCCGATATTCGGTGAGTAACGCGACGCCCGGAGCCGCGGCGAAGATAGAGCACATGGTGTGCAGCCTGTGCAACAGCGTGTACGACAATTCGGTCAATCTGATTCAGCACTTTATCGTCGAACATCAGTCGGAGGACGGCAGCTTTCAGTGCGGCTATTGCACGGTACGCGCGGCCAACATAGACGAACTGGTCTACCATGTGGACAATCACAACGAGGAAACGCAGAAGAAGCTGAAAATCGTCTACTTGTGCGCCATTTGCAGCGGCGAATACAACTCGAACGATCCGTGTTACGCGTTGGCCGACTATCACACTCATCTGAAGGAAAAGCACGCGCTGTTCTCCGAGACGGTGAACAACGGTTGCAGCCTGTGCGATCAGATGATACTCGGAATGAAGAATTTCACCGAGCACGTCATCGACCGTCATTTCGAGGGCGCCCGCTGCCCGATCTGTCAGTCCGATTTGCCGTCATCGGACGCCGTTTACAGTCACATCAGCGAACACTACGGGCGCGATAACGGACAGGAACGGTGCCCGTTCTGTAAGCGGGACTTTTGCGCGTACGACTTAACGGCGCACATAGCGACCAGCCACTCGGTGTACCGGCTCTATTTAAAGCCGAAGTACTTCCGATGCGTGCTGTGCGATTCCGGCTTCAGTTCGCTGAACAAGCTGACGAAGCACGTCTGCTCGAAACTGGACGAATCCGTCTGCTCCGTATGTCAGACGAGTTTCCCGTCGAAGAAACGCCTAGCATTCCATCTGATGTCGCATCTGCAAGACTTCGCGTTCAAGCTGCGCTGCGACGTCTGCTATCAGTCGTTCGACGACGAAACTACCTGCTACAATCATATCCGGTTCACGCACGAGTCGGAAACGTTGACGTGCGACCGGTGCGGCGTAGTATTCAAAACTCGCGTCGGCCTGCTCATACATCAGCAGTACCATACCGGCGAACGGAATTACCCGTGCGCCGTCTGCAAGAAGTCGTTCTACAATAATACCACGTTGCGTGAACACGAAGTCACTCATATGAGCGTTAAGCCGCACGTTTGCCACATATGCGGCATGTCGCTGTCCAGACCGTCGCGACTGCGCGTGCACCTACGCGCTCACTCGATCGTGTCCAGCAAGAACGTGCAGGTGTGTCGCCTGTGCAACTACTGCGGCTTCGCTACCCCGTTTAACGAAACCAACGATCAGCAGCCGTCGAAACACCTGTGCCTGAAGTCGGTGTTTCCGAAACTGAACGGTCCGGAACGGTCCAAGTTCGAACAAGAGATCGGACTATCGTCCGTCTATAGTAGtgaccaccaccaccaccaccaccatcaacaacaacaacaacaacaacagtcGGAAGTCATGCGATCGTTGGCGGATGACGATACAGCCAGAGACAGCGGCGTCGCTGTGCTGCAGTCGACTGTCACGTTGAAGGTGGTCTACATGTGCGAGTTCTGCAGCAATTGCTTCGCGAACCAGCTGAAATTGAACCTGCACATGAAGTATCTGCACACGCACACCGACCCGAACGACATGCCGTACGTATGCAACCAGTGCGACACGCCGTTTTCCACCTATAGTCGACTGGCCACGCACCGTCTATCGCACGGCATAACCACCGAGACGTATATAGTGCCGGATTCGAACGCTGTCGCCTACAAAAACACGAACGAATTCGTCATTCCGCGCGTCTACAGTTGCGAGATATGCTTCAAAACGTACAATCAGTACACCGCCTTCAACTATCACCGGAAATTCGGCAAGCACAAATCGAAACAGTTGGACGGCCGTAAGTTGTTGTCGCACGATTGCGGCATTTGCGGTAAACTATTCGTGAACCAGAAAAAGCTCGAAAGTCACCAGATCCGGTTTCATAACGACGTCGACGACGAGCCGAATCGACGATTTTCGGTGAATATCAAATCGAAGATTGCTGCCGTGTCGATGATGTTTAAAAAGTCGTCGTCGAGAGGTCGTAAACCGCTACGGCAGCGTAACGGCAACAGTAGCCGAACCGTCGACGATGAgtcgtcgtcgtcatcgtcAGCGGCGGCGGCGACATCGTCGTCGTCCTCGCCGCTGTTGAAATGCGACCATTGCGACAAGACATTCTCGCATAAGGCCGCCTTCGCCAGACACTCGAAAGCGGTCCAGTCGAACACGGCCAGCGCGTCCGGTCGACGCTTCGGCTGTCGCTACTGCGATAAAACGTTCGCTCAACGGGGATACCGGGACATACACGAACGGAAACATTCGAACGATAACGCGAACAACAGCCATCAGCAGCAACGGCCGGACAATGCGCGCTCGTCACGGTCCACGGTACTCATTGTGCAGTGCGAGCATTGTGATTACACGTGCACTTCGACGAACGAACTGGAGGCGCACGCCAAATCGCACGCCGTCAATTATTACCGGTGCCAGCAGTGTTCGAAACGGTTCAAGCTGGAAAGCTCGCTAAGAAGACACCTACAGAAACACGCCGAGGATAATAAGGAAAACCTGTCTCCGTCGCGCTACGACCTGAGCGATGACGGGCACCTGTACGGACCCGACAAATGTTGTCCGGTTTGTTTGCACGACTGTAACGCAGCCAACGGCTTTCACGACCACATGAACGCTGGCCACCAAGCCATTTCTGCTGTCGATCAGTGGACGTTATAA
- Protein Sequence
- MAYSYAGDETHCLEELLQASNMEYNGNMIIPRAALLTPSSIVPFMSNVCCICYSNTANQYVHLSDSFINASPLPLMPTNQSNSMCSACVGMLGLNSVLQQQQQQQQQQQNFNNVLVNANYYQQHELDSANGGNNSLMNIGLSNYCDHGHEQSQQMIGAAFMPFGNGTATGQPYTNVTSFVGGGTGMQATREYEFANQQLANDLSDVEISDIFSLNEITVSDEDITFIANSLDLNEAPVVILDSSGSESSCSSASGSTSNRNSLELIDNNSSSVHSISSASDGSSSTNGSNMNIESEYSLSPQLSHRLTASVSVNGIADVPNRRCYLNNGAQPLIVGQSGNGDRNGLLSKEEADDDEHNMRSETDRLPLRSGQYRATAPPELAEDNSEMGAVEQKLQQNTLQPLLSPMAVNKLEINDVWSEAADAASERGNFEENDRYTILNHPVADEEWSSSVAVTDRRSDYEWPTASSMSSSSTTGALLIAEQRNSLKLTEHPSTLKFEAIDEQVHDDASTDRWSYDDAQLASVEQLQTFAVDSNNRSTAVVQKRRGRPRKKLVADTISGGVFGSDHRKPRGRPKGVLNRIRYSVSNATPGAAAKIEHMVCSLCNSVYDNSVNLIQHFIVEHQSEDGSFQCGYCTVRAANIDELVYHVDNHNEETQKKLKIVYLCAICSGEYNSNDPCYALADYHTHLKEKHALFSETVNNGCSLCDQMILGMKNFTEHVIDRHFEGARCPICQSDLPSSDAVYSHISEHYGRDNGQERCPFCKRDFCAYDLTAHIATSHSVYRLYLKPKYFRCVLCDSGFSSLNKLTKHVCSKLDESVCSVCQTSFPSKKRLAFHLMSHLQDFAFKLRCDVCYQSFDDETTCYNHIRFTHESETLTCDRCGVVFKTRVGLLIHQQYHTGERNYPCAVCKKSFYNNTTLREHEVTHMSVKPHVCHICGMSLSRPSRLRVHLRAHSIVSSKNVQVCRLCNYCGFATPFNETNDQQPSKHLCLKSVFPKLNGPERSKFEQEIGLSSVYSSDHHHHHHHQQQQQQQQSEVMRSLADDDTARDSGVAVLQSTVTLKVVYMCEFCSNCFANQLKLNLHMKYLHTHTDPNDMPYVCNQCDTPFSTYSRLATHRLSHGITTETYIVPDSNAVAYKNTNEFVIPRVYSCEICFKTYNQYTAFNYHRKFGKHKSKQLDGRKLLSHDCGICGKLFVNQKKLESHQIRFHNDVDDEPNRRFSVNIKSKIAAVSMMFKKSSSRGRKPLRQRNGNSSRTVDDESSSSSSAAAATSSSSSPLLKCDHCDKTFSHKAAFARHSKAVQSNTASASGRRFGCRYCDKTFAQRGYRDIHERKHSNDNANNSHQQQRPDNARSSRSTVLIVQCEHCDYTCTSTNELEAHAKSHAVNYYRCQQCSKRFKLESSLRRHLQKHAEDNKENLSPSRYDLSDDGHLYGPDKCCPVCLHDCNAANGFHDHMNAGHQAISAVDQWTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -