Ipur053510.1
Basic Information
- Insect
- Icerya purchasi
- Gene Symbol
- -
- Assembly
- GCA_952773005.1
- Location
- OX731681.1:245205343-245248409[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1.2e-05 0.0065 18.8 0.6 1 23 762 785 762 785 0.98 2 22 7e-05 0.036 16.5 0.5 1 23 790 813 790 813 0.96 3 22 0.43 2.3e+02 4.5 3.2 1 23 817 839 817 839 0.97 4 22 0.0005 0.26 13.8 0.4 1 23 847 870 847 870 0.96 5 22 0.18 93 5.7 0.2 2 21 876 895 875 896 0.93 6 22 0.018 9.5 8.9 2.2 1 23 908 930 908 930 0.98 7 22 0.0025 1.3 11.6 3.5 1 23 936 958 936 958 0.98 8 22 0.00013 0.068 15.6 1.6 1 23 993 1016 993 1016 0.98 9 22 0.00022 0.11 14.9 0.8 2 23 1022 1044 1021 1044 0.94 10 22 0.00046 0.24 13.9 1.6 1 23 1048 1070 1048 1070 0.97 11 22 0.00026 0.14 14.7 4.3 1 23 1078 1101 1078 1101 0.96 12 22 2.3 1.2e+03 2.3 0.3 2 20 1107 1125 1106 1127 0.92 13 22 0.18 91 5.8 0.9 1 23 1139 1161 1139 1161 0.97 14 22 0.0038 2 11.0 3.2 1 23 1167 1189 1167 1189 0.98 15 22 0.00075 0.39 13.2 2.5 1 23 1224 1247 1224 1247 0.98 16 22 0.00018 0.092 15.2 2.7 1 23 1252 1275 1252 1275 0.95 17 22 1.3 6.7e+02 3.0 5.6 1 23 1279 1301 1279 1301 0.97 18 22 0.00035 0.18 14.3 0.6 1 23 1309 1332 1309 1332 0.96 19 22 0.035 18 8.0 0.6 2 21 1338 1357 1337 1358 0.94 20 22 1.1 5.7e+02 3.3 1.0 1 23 1370 1392 1370 1392 0.92 21 22 0.0025 1.3 11.6 3.5 1 23 1398 1420 1398 1420 0.98 22 22 0.00054 0.28 13.7 1.9 1 19 1425 1443 1425 1448 0.90
Sequence Information
- Coding Sequence
- ATGTTTTTCAATACTCGTACGAAAGTTGGAAATGGAGAAAAACTGAACACGGAATTAATTGAATCGAGATTCGTTAGCAAAGAAGCGTCTGATATTGCCTGTCCTCACGGGATACGACTCTTTTTATCAAATGCAGCTGTTCAAATGTACAATAACTCCATATTAAACATAGTAGAAAATAAACTAACTCCTGTAGCGAAAGATGTTTATACGGGCTGCCATAATGCTGAGCAAGAAGCTTTCGTAAAGCAAAAACTACATAAAATGTCGACAATTGATTCGAGAGGATTTCCTTATCAAATAATGTTCCTCATTGTGCCAAATCCAGAAAAAATGGGAAGGAAAATTCGAAGCAAAGTTTCAGGGTACATTGCGGGTCATAATATCTCAAGAAATGCTGTACCTATAGCCAGAAGATCATGTACTATACCACTTCATAATAACAAAACTATAAATGCTAAACGTAATCATTTTCCGTTGGTGTCTGCATGCGCTATAACGATTCACAAGTCACAAGGAGCAATATTCGATGAAATTGTTTATGAGTATGAGAAAACGCATTCTCAGCAATTGGCACCGTCAGAAACTATAACCGActttgtttccaaaaaaaagagtattaaaCGGAAGAATACCGATGGAAGTGACTGCGCTAAAAACGCATTATCGAAGAGACAATGTCTAAATGAATACTTAAAAGAAGATGAAATTGTGTCACCGATAACCACCGCGAGTGCCAATTCAATCGCCGTCACTTACAATGTTCCGGATACGGTGAATAATACTCAATATGTTATTAGTATAGCTCCTCCTCAAATTACGAGCAACCAGAATAACAGCGTAGTACCGTATGAGTTTATCCATAGTGATCTGTTTCAGTTGCTTCAAAAAACCATTTCAAACGAAAATATTACCAGCGTTAATTCCGATAGCGCGCTTTTGTTCGAGGTGCAAGAAAATAATAGAGATCAACGAagtttatactattttattcctCTTTTGGGAAACGATGGTAACGGCAGCggaaataatagtaaacaaataacgaataattacgCATCCAGTCTGATGAACAATACAACGCAGGTTATTGATATTACCGACGACGAATGTGTAAAAACTGATAATGATCACGGTAGAGTAAATGATGTTTTTCCGTCGAATGGTTCAGCTCATTGTAGTGTTAGTTCTAACGAAATGAAATCATCTCCTTCAATCAGTATTCGGTCAGTGGATGCGATAAATCGTGTCGATAAGGATGCTGCGTTTTCGGATGAAAATACCGCCAGCGAAACGAGAAATAAGGGAAACATCATGGAGCACAGTAGATCGACATCGGCTGATGATAGTTGTAATAGTTTTGACGTTAGTAATGGAGTTCTGTTGAAGACTTTATTAGCGAAACAAAAACATCGACTTTCATCGAAAgccaataataacaataattatcgTAGTAATAATAGGAAGAATCCGCGTGATGATACtagtaataattttgaacacaATAACAATCAAATAATGAATAGTAAAAACCAAAGCGCATATCCATTAAACACAAATACGACCAACAATGTTGAGTTCGGTAAATCGTCTTCTTCGATCAATATTCGATCGATTGATGCGATAAATCGTTTAAGCGACACTTACGATTGTAGTCATCGAAAAACGAATACCGGTTGCCAACGGCTACCGGCGAATTCGGAACTAAATGTCATCAACGGACAAAAAATCAACGTCAGTTCGATTTCCGATAATTTGCCTAAGCGTTGCAAACCCGATAGCGAATTGCTGACAACTATTAGCCCCTCCCCCAGTCTTAGAACAGGAGGATCCATTCCTCTTGCTACCCCTATCGAGATAGCTGAACTTATTGACTCGCGCCTGCTCAAGAAAAGTCCCAGCCATGATGGCATCTCCTCTGCTTTGCTAAGGAGCTGCTACAAAAAGAAGGTCGAGAAGATGTTAATGACGATTCCCAAAACTGAAAAGATCCATGAAAGGACGGAGGTTTTCCACGATTTAGGAGATAAAGACCGCATCGCAAGAAGAGCTCAAGGCCATACCAAAAatgATTTAGCGCCGGCTGAAATGAATGTTGTACAACCTTCTCGACCAGTTCAAATATCACCAGTTTATATAGTAGATTCTGATAATGAAGATGATAGAGGTTTATGGAATAATAGTGTCAACGTGCCAGTCATGATgGGTATCAATCCAGTTGTACTGCTACATAGTCAGTCAGCTGTCACGCTTCGTAGGGATGAAGAGATCAGTCAGCTGAAATACAAATGTGGTTTATGTGATACTACGTACAACACGAAAGAATCTTTAAATGGTCACATTAGAAGGCTTCATTCTGAGCGGAATTTTCAATGCTCTCGATGTTCACGAACGTTTTCCGGTAGAGGTTTATTGGCTAAACATATGGAACAGATTCACATTAGACCATATTCTTGTTCACAATGTTGTAAAACGTTCGGCATTAAAAGATTACTACAAGTTCACGAATACACTCACGTTAAATCATCACCGAATGATTACGTTTGTCAGATCTGCAATAAGACGTATAAGGCGGAATTCCTGTTGAAAATACACGTGAAAAATGTGCACGAAAACCACCCGAAGCCGTGTCCTAAATGTCAGTTGATCCTTAATACCAGAAGTGCGTTCCTTTCTCACCGTATGAAATGCATTAATAACGTCAATAGGTGCCGACAGATTTATACCTGCGATATTTGCCAGAGTAGTGTTTCGTCGAAAGAAGTGATGCGACATCATATGTACAAGCACTTGAATCTGAAGCCGTTCAAGTGTGACCAGTGTTCGGCTAAATTTTCCAGTCCGAATTATTTATACCACCATAAACTTTCTCACGGAGAGCCAGCATTTCCCTGTCCGGATTTCAATACAGCCGTCTCGCCACATTCTCCAACAGTTATCGAGCATCGTAGGAATGAAGAAATAGAACAACAAGAATATAAATGTCGCTTATGTAATACTACGTACAGCACGAAACAAGGTTTAAACGGTCACTTAAGAAGGCTTCATACCGAAGAGATCATTCAGTGTTCTCGATGTTCAAGAAAGTTTTCCACTAAAGGACGTCTAGCTAAACATATGGAGCTAATTCATATTAAACCATTTTCCTGTTCCGAATGTTATAAAACGTTCGGCGCTAAAAGAGATTTACAGAGGCACGAATATACTCACGAATCATCATCAGGGCGTAACTTTGTTTGTCAGATCTGCAATAGGACGTATAAATCGAAGTATCAGTATGAAAACCACACGAAACATGTGCATGAAAAATCTCCGAAGCAGTGTTCTAAATGCCAGTTGATTCTTAATACTCGAGCTGCTTACTATGCCCATCGCTATAAATGTCTTACCAAAAGTAAGAGTAAACGGGAAATTTATACCTGCGATATTTGCCAGAGTAGCGTTTCGTCGAAAGAAGTTTTGCGATTTCATATGTACAAGCACTTGAATTTGAAGCCGTTCAAGTGTGGCCAGTGCTCGGCCAAATTTTCCAGTCCGAATTATTTATACCACCATAAACTTTCTCACGGAGAGCCAGCATTTCCCTGCCCGGGTATCAATCCAGTTGTACTGCGACATAGTCAGTCAGCTGTCACATTTCGTAGGAATGAAGAGATCAGTCAGCTGAAATACAAATGTGGTTTATGCCATACTACGTACAACACGAAAGAAGCTTTAAATGGTCACTTCAGAAGGCTTCATTCTGAACCTAATTTTCAGTGCTCTCGATGTTCAAAGAGGTGTTCCACAAAAACACTGTTAGTTAGACATATGGAAGCAGTTCATATTAGACCTTTTTCGTGTTCGAAATGTTGCAAAAAGTTTGGTAAGAAAGAGCGATTAAAAGTTCATGAATACACTCACGTTAAACCATCGCCGAATGATTACGCTTGTCAGATGTGCAATAAGACGTATAAGGCGGAATTCCTGTTGAAAAGGCACGTGAAAATTGTACACGAAAACTATTCGAAGCAGTGTCCTAAGTGTCAGTTGATCCTTAATACCAGAAGTTCGTTCTTTGCTCACCGTATGAAATGCATTAATAACGACAATAGGCGCCGGCAGATTTATACTTGCGATATTTGCCAGAGTAGTGTCTCGTCGAAAGAAGTTATGCGATTTCATATGTACAAGCACTTGAATTTGAAGCCGTTCAAGTGTGACCAGTGTTCGGCCAAATTTTCCAGTCCGAATTATTTATACCACCATAAACTTTCTCACGGAGAGCCAGCATTTCCCTGCCCGGTTTGCAAGATACGTTTTAATCGTCGGGACAATATGAAAAAGCATTGCTCGATGGCGCATAAACAATCGGAGGGAATTTCGTAA
- Protein Sequence
- MFFNTRTKVGNGEKLNTELIESRFVSKEASDIACPHGIRLFLSNAAVQMYNNSILNIVENKLTPVAKDVYTGCHNAEQEAFVKQKLHKMSTIDSRGFPYQIMFLIVPNPEKMGRKIRSKVSGYIAGHNISRNAVPIARRSCTIPLHNNKTINAKRNHFPLVSACAITIHKSQGAIFDEIVYEYEKTHSQQLAPSETITDFVSKKKSIKRKNTDGSDCAKNALSKRQCLNEYLKEDEIVSPITTASANSIAVTYNVPDTVNNTQYVISIAPPQITSNQNNSVVPYEFIHSDLFQLLQKTISNENITSVNSDSALLFEVQENNRDQRSLYYFIPLLGNDGNGSGNNSKQITNNYASSLMNNTTQVIDITDDECVKTDNDHGRVNDVFPSNGSAHCSVSSNEMKSSPSISIRSVDAINRVDKDAAFSDENTASETRNKGNIMEHSRSTSADDSCNSFDVSNGVLLKTLLAKQKHRLSSKANNNNNYRSNNRKNPRDDTSNNFEHNNNQIMNSKNQSAYPLNTNTTNNVEFGKSSSSINIRSIDAINRLSDTYDCSHRKTNTGCQRLPANSELNVINGQKINVSSISDNLPKRCKPDSELLTTISPSPSLRTGGSIPLATPIEIAELIDSRLLKKSPSHDGISSALLRSCYKKKVEKMLMTIPKTEKIHERTEVFHDLGDKDRIARRAQGHTKNDLAPAEMNVVQPSRPVQISPVYIVDSDNEDDRGLWNNSVNVPVMMGINPVVLLHSQSAVTLRRDEEISQLKYKCGLCDTTYNTKESLNGHIRRLHSERNFQCSRCSRTFSGRGLLAKHMEQIHIRPYSCSQCCKTFGIKRLLQVHEYTHVKSSPNDYVCQICNKTYKAEFLLKIHVKNVHENHPKPCPKCQLILNTRSAFLSHRMKCINNVNRCRQIYTCDICQSSVSSKEVMRHHMYKHLNLKPFKCDQCSAKFSSPNYLYHHKLSHGEPAFPCPDFNTAVSPHSPTVIEHRRNEEIEQQEYKCRLCNTTYSTKQGLNGHLRRLHTEEIIQCSRCSRKFSTKGRLAKHMELIHIKPFSCSECYKTFGAKRDLQRHEYTHESSSGRNFVCQICNRTYKSKYQYENHTKHVHEKSPKQCSKCQLILNTRAAYYAHRYKCLTKSKSKREIYTCDICQSSVSSKEVLRFHMYKHLNLKPFKCGQCSAKFSSPNYLYHHKLSHGEPAFPCPGINPVVLRHSQSAVTFRRNEEISQLKYKCGLCHTTYNTKEALNGHFRRLHSEPNFQCSRCSKRCSTKTLLVRHMEAVHIRPFSCSKCCKKFGKKERLKVHEYTHVKPSPNDYACQMCNKTYKAEFLLKRHVKIVHENYSKQCPKCQLILNTRSSFFAHRMKCINNDNRRRQIYTCDICQSSVSSKEVMRFHMYKHLNLKPFKCDQCSAKFSSPNYLYHHKLSHGEPAFPCPVCKIRFNRRDNMKKHCSMAHKQSEGIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -