Basic Information

Gene Symbol
ncor1
Assembly
GCA_952773005.1
Location
OX731681.1:405560705-405589504[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-08 0.00017 23.6 0.0 4 44 431 471 430 473 0.97

Sequence Information

Coding Sequence
ATGGGCAGAGTTGAAAGAGGAGATGGTTCTGGAAGTACGATTTTGGATTTCGTAACATCTAAAAGACCGCTGCTTGCCACGGAATATATGTCAACTCCTCGACGAAGGCATTCACTGTTGGAGGTTGATGAAAATGATGCCGATTACGGTGACAGCGGTAATCAAGCTTTGGAAGAGTATTTAACGGATAGCTGGGCAGATCGTTATACTTCCAGTCGAAATAGTTTGCTGCACGCGAAGAAACCATGTAAACTAAGAAATAAAAGGAATGAATCGTATTTCGACAGTCTGAACGCTTTAGAATTAACGGCTCCTCCTATAAAAAGGCATCGATTCAGTAACGATTACAGGTTATACGATTCGTTTCCGCTAAATCAAGCTGTTAGTCCGGAGTCAGAAAGACGATCATCAGGAGCAGAGTCATATAAACCAGTAATAGAACCAGTATCTCCTACGCTGCCTTCAACTTCACCGGAGCCATGTCCGCCGCCAGATCCAGAAAATGCTGCCGAACCACCTTCCTTAACCGATGACAAATTGATCGAGGAAGCAAATGCGCTGACGTTAGTGGAAGAAGAATTGACCAATAATCCGACCGAATTAGTCAATACGCTTTGCAGTCTGGAACAGCGCATAAAGACCACTAGCAGTGACATAGAGCGGCTAGAAGAGAAACAGaaAAAACTGCAAGAGTCAATAACTGCCAACAAATTCGACGAGGAAGATGACATGGAGTATTTTCCACGTCGCATACAAATATACAAGTCCATATTCACTACAAACTGGCCAATGTACAATCAAGCCTCCGATACTATTGTATACCATCAAAACCGAAAGAAgtTTTTAGAATTTAAGCCGTTGCTGTTAGAAAAGATTAAGCGCGAAAAACTGTCTAAAGCAAGCAGGGAGATGGTTATTTCTAGCGCGTACAGTAGATTGTCTGCCGATTGGAGAAGAAAAGTCGAAAAGgTTGAAAGTTCTCAGAAAAGAAAAGCTAAGGAAGCGAAGAACAGAGAAGTTTTCGAAAAAGTGTTTCCAGAATTAAGAAAGTTGCGAGAAGATCGTGAAAGATTTAGTAGATGCGGCGGACGAATCAAAAGTGAAGCCGATTTGGAAGAAATAATGGACGGTTTGCAAGAACAAGAATTAGAAGATAAAAAGATGAGGTCGTATGCTGTGATACCTCCATTGCTGTTAGATCAAACGCAAAAGCGGTTTCCGTTTATCAATACGAACGGCAAGGTTTTCGATTTCGAATACCAGTATAGGGAAAGGCAGCATTTGAATTTCTGGACAAAAGAAGAGAAGGAGGTGTTTAAAGAAAAGTTCCTGCAGCACCCGAAACAGTTCGGCATAATAGCTAGTTTTCTGGAAAAGAAAACGCCCGGAGATTGCGTGGCATTTTATTATAGCAGCAAGAAAACGGAGAATTATAAACGGCTTTTAAAAAGATCTCGACAAAGAACAAGGACGAAAAACGTTCACAGTAAAGTCAGTGGTGCTGGAAACGGGCTCGGTTTGGACGGCTTATTTAGTAATACATCCGGTGTTACTACGCGCCAGCAAATTCAAGCTCAACAGAAACTCGAACAACCTCAACAGAATTTGTACACAAGTACAACTACTGCCATAGCCAATACAACAGTTACCTCCACCAGCGCTGCCAACGATGTTAATAACGTTGACAGTGTCGATAATGCTGCCGATAGTACGGTTTGCGAATCTGCGTTCCCTGATAGTAATGTTTCTTCGCCAGCTCAAACTCCGCCGCCTAGTATGTCGACTAACGCATCTTCTTTACTAAATAATCGGATACGTGCTCCAGCCGCTGCATCAGTTGATAGTAAAACGTCCGTTCCAAACAGTCCGTTAAACGAAGATGCCGAACAGCCGGCTGCGATGTTAGAAGATGACGCGGTAGTCGATCATGAAGGTGTTAAATCTTCAGCCGAAGAAAGTTCCGTCCCGTTACAAACTTCTGAGGCCGTTACTGCTGTCGTcaagaaggaaaaagaggacGAAGAAAATGAATCCAGTAGCATTCCGATTGATATTAAACCAGTTATTAAAACGGAACTAGAAACGAGTGATAGCAATATGCATAGGTAA
Protein Sequence
MGRVERGDGSGSTILDFVTSKRPLLATEYMSTPRRRHSLLEVDENDADYGDSGNQALEEYLTDSWADRYTSSRNSLLHAKKPCKLRNKRNESYFDSLNALELTAPPIKRHRFSNDYRLYDSFPLNQAVSPESERRSSGAESYKPVIEPVSPTLPSTSPEPCPPPDPENAAEPPSLTDDKLIEEANALTLVEEELTNNPTELVNTLCSLEQRIKTTSSDIERLEEKQKKLQESITANKFDEEDDMEYFPRRIQIYKSIFTTNWPMYNQASDTIVYHQNRKKFLEFKPLLLEKIKREKLSKASREMVISSAYSRLSADWRRKVEKVESSQKRKAKEAKNREVFEKVFPELRKLREDRERFSRCGGRIKSEADLEEIMDGLQEQELEDKKMRSYAVIPPLLLDQTQKRFPFINTNGKVFDFEYQYRERQHLNFWTKEEKEVFKEKFLQHPKQFGIIASFLEKKTPGDCVAFYYSSKKTENYKRLLKRSRQRTRTKNVHSKVSGAGNGLGLDGLFSNTSGVTTRQQIQAQQKLEQPQQNLYTSTTTAIANTTVTSTSAANDVNNVDSVDNAADSTVCESAFPDSNVSSPAQTPPPSMSTNASSLLNNRIRAPAAASVDSKTSVPNSPLNEDAEQPAAMLEDDAVVDHEGVKSSAEESSVPLQTSEAVTAVVKKEKEDEENESSSIPIDIKPVIKTELETSDSNMHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-