Ipur011069.1
Basic Information
- Insect
- Icerya purchasi
- Gene Symbol
- -
- Assembly
- GCA_952773005.1
- Location
- OX731680.1:178113036-178113464[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-10 3.4e-07 31.9 0.0 5 36 1 32 1 40 0.91
Sequence Information
- Coding Sequence
- ATGCACAAGGCCGTGGAGAaggttttaaataaagaaatgagtGCGCGTCAGGCTGCAGATCGTTTTAAGGTATCTAAAACGACATTAAATGACAGAATCAgtgctattaaaaataataaagaggtGTCAATTAAGCCAGCTATGGGTTGCTTCCACGCAACATTCTTACCTGAACACAAGGAAATTTTGGTTAAACATGTTAAAGATTTGGCAAATAGATTAATGCCTTTAAGTAAACAAGAATTTCTTAAACTTGCTTTTCAACTagctgaaaagttaaaaatcctACATCAATTCAATAAAGAGGAGATGTCAGCTGGCAAAAACGATTGTTATGCCTTTATGAAAAGACATGGCGACTTATCACTGCGAACTGCAGAATCAACTAGTTTAATGAGAGCTGTAGCGTTTAATAGACCTCAAGTATAG
- Protein Sequence
- MHKAVEKVLNKEMSARQAADRFKVSKTTLNDRISAIKNNKEVSIKPAMGCFHATFLPEHKEILVKHVKDLANRLMPLSKQEFLKLAFQLAEKLKILHQFNKEEMSAGKNDCYAFMKRHGDLSLRTAESTSLMRAVAFNRPQV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00833895; iTF_00833918; iTF_00833917;
- 90% Identity
- iTF_00833918;
- 80% Identity
- -