Ipur004513.1
Basic Information
- Insect
- Icerya purchasi
- Gene Symbol
- -
- Assembly
- GCA_952773005.1
- Location
- OX731680.1:73865396-73866046[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-10 4.4e-07 31.5 0.0 2 38 16 52 15 59 0.86 2 2 1.2 1.6e+03 0.9 0.1 11 20 145 154 143 155 0.87
Sequence Information
- Coding Sequence
- ATGCCTAGAAGTTAtaaaatgacaacagaacgagCTCAGTGGACTGCAGATGACTTAAGAGCTGCTATTAGCGACGTCAAAAATGGGATATCTATAAGAAAAGCTGCCAAGAATCGCAATTTACCATTCAGCACATTGCAAGAAAGGCTGAAAAATATGCAAATGAGTGCGCCTCGTCTAGGAAGAAAATCTGTTTTCACTAAAGAACAAGAATCTGACATAGCTGAGCATTTAATGCAAATCGACAAGTTTAAACAGAGATTAAGAGGATTTAATAAAGATGAGGTTAACcgattttttaataaccttgaagaggttatggataaatttaaatttggtccAAACAAAGTATATAATATGGACGAAACTGATATAAGCGCAGTTCATGAAACGAACAAAATTTTAGCCTCCAAAAGACAGAAAAGAGTTGGTGCTGTGTCCTCAGGAGAAATGGGGACAAACAACTACAGTTATTTATGCATTTAA
- Protein Sequence
- MPRSYKMTTERAQWTADDLRAAISDVKNGISIRKAAKNRNLPFSTLQERLKNMQMSAPRLGRKSVFTKEQESDIAEHLMQIDKFKQRLRGFNKDEVNRFFNNLEEVMDKFKFGPNKVYNMDETDISAVHETNKILASKRQKRVGAVSSGEMGTNNYSYLCI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -