Ipur007938.1
Basic Information
- Insect
- Icerya purchasi
- Gene Symbol
- TIGD6
- Assembly
- GCA_952773005.1
- Location
- OX731680.1:129256193-129262863[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.18 2.3e+02 3.6 0.0 17 43 28 54 27 56 0.82 2 2 1.6e-09 2e-06 29.4 0.0 4 35 499 531 498 538 0.91
Sequence Information
- Coding Sequence
- ATGTCGTCGAAACCAAAACGTCGCGATTGCAGTGTTTcggaaaaagtaaacattttacgaAAGTATGACGCGCTTGTACCCATATCCCAACGTGAAGCAGCATCAAAATTAGGAATTTCGCAACCgctattatgtaaaattttgaagtcgagAGAAGAATTGGAAACTGCGACGATATGCAACGGGAACACTTCGCGTAAAAGAAAACGATTCGGTAAAGATGAACAAGTTGAAACAGCTTTGGTTGGATGGTTCGATCAGGTACGTGACAAGAACGCGTCAGTTAACGGTCCGATTTTACGTGCAAAAGCGGAAAGTTTAGCGAAACAGTTAGGCAAAGAAGATTTCGTTGCTACAGAAGGCTGGTTTCGTAGATTTACGAATCGGCACAACTTAGTTTATAGAAAGCCGTGCGGCGAACAAGCTGACGCTGATGTTTCTGCGGCTGAGTCGTGGATCAAAGATGTTTGGCCTACCTTAATTGATCAGTATTCTCCTGATGACATATTTAACGCTGATGAAACCGGGATTTACTACCGAGCACTGCCTGAAACCACGTACGTGTTCAAAAGTGAAGCGTTGAAGGGGTTTAAAGTAGCCAAAGATAGAATTACGGTGCTATGCTGCTGCAGTATGTCCGGTGAAAAAGAAGAACTGCTGGTTATCGGTAAGAGTAAAAATCCAAGATGCTTCAAGAACGTAAAAAACCTACCAGTTTCATATTCGGCTAATAAGAATGCCTGGATGacgttggaaatttttaaagaatggtTGGTGCAATGGGACCGACGCTTAAATCGAAACATTCTTTTGCTGGTGGACAACTGTACAGCTCATAATGTCGACCTAACTTTCCGCcacattaaaattgtttttatgcCGCCGAATACCACCTCATTAATTCAACCGTTAGATCAAGGCGTAATTAGGACCCTAAAGGCGTACTATCGCAACGAAATGAGACAACGAGTTTTGGAACAGATCGAAGGCAACATGCAAGGCTTATCGGCGGCCGAATTAAGTACGAAAACTGATCTTCTATCAGCTCTCCATCTCTTGAAGCATGGCTGGGATTCAGTTActaaattaacaatttctaactgcttcaaaaaaggaggattCTTTCCAAAATCAGAACTGGTCGAAGTGCTTTGTGAACTCCCTTGTCCCGATGACTTGTTACAAGTCGAATTTGAAGAATGGCTCGATATTGATTCCAATTTGACTACTGCTGCTCCTGTGACTGAAAAAGATGTATGCGACAACATTTTAAATCACGACGACGAAGAGCTTTCATCATCAGAGGAGGAAATGGAATATGAAAATAGTGTACCCTCTCACAAAGAAGTTATAGATGCCCTCGCAACCATTCGACGATTTGTGCAGTGCAGAGGCACTGTTGATAATTTCAATGATACTTATGCgttCATAAAAATACCACGCGATGAAAGTGATGTTGAAGCAAAGAGAAATAAGGGCACTTGGGATCTTTCCGACATGCACAAGGCCGTGGAGAaggttttaaataaagaaatgagtGCGCGTCAGGCTGCAGATCGTTTTAAGGTATCTAGAACGACATTAAATGGCAGAATCAGtgctattataaataataaagaggTGTCAATTAAGCCAGCTATGGGTTGTTTCCACGCAACATTCTTACCTGAACATGAGGAAATTTTGGTTAAACATATTAAAGACTTGGCAAATAGGTTAATATCTTTAAGTAAACAAGAATTTCTTAAACTTTCTTTTCAACTagctgaaaagttaaaaatcccACATCAATTCAATAAAGAGGAAATGTCAGCTGGCAAAAACGATTATTATGCCTTTATGAAAAGACATGGCGACTTATCACTGCGAACCGCAGAATCAATTAGTTTAATGAGAGCTGTAGCGTTTAATAGACCTCAAGTAGAACGTTTTTTTGACTGTCTTGAGAGTTTGATCGAAAAATATGATTTCACTCACTATAAAATACTGAATTGCGATGAGACTGGTGTCAGTATTGTTTCGACACATTCTAAAGTTATAGCTactaaaaaccaaaaacaaattgGAAAACTTACTTCGGCAGAGCGTGGAAAAAATGTGACAGTGCTTTTTGTAATGAGTGCCGGATGTCAATTTGTACCACCATTCTTCATGTTACCAAGATCCAGAATGAATGAGCGACTCATGATAAATGCTCCATATGAGAGCGTAGTATTCCAATCCTACAGAACAAAACCCAGTTCTGTTCTTGATGGGCATGCCAATCACAAATACTTGGATGTCATCCTATTTGCTAGAGAAAATCATATCCATATGTTGAGCACCCCACCATACAGGACTCATAAGCTGCAGCCGCTTGATCACACCTTTATGAAATCATTTAAGTCTGCTTACAGTGATGCATGTGATTTATGGATGAGGTCAAATGCTGGCATAAGGAATATCTTCAGTGACTTAGATTTCATTGCTTCAGATATGACAAATATTGCAGACAATTCACCATCGTTTTCCCAACTAACAGAACCGACACCGTCAACTTCTGCACATGCACCTCAACCTACTGCTTCTAACTTTGAACCTCATGTTAACCCTTCTCGACAATCTGAGGCACAAACTGCTAGTTCTAACACTGAATCTCAAACTGCTTATGAAAAATCCGAGCCTCAAACATCAGCTATCATTGACCAATcggTTCTCACCCAGACGCCGATTCAGGAGGAGACAATTTGTCCTTTATGTTTCGAATCCCACGATGAGGACTGGATTCAACGTGGAAACTGTAAGTCATGGGTCCATGAATCTTGTGCGAACATTTCTGAATTATCAAATCAGTATATTTGtgattattgtataataatataa
- Protein Sequence
- MSSKPKRRDCSVSEKVNILRKYDALVPISQREAASKLGISQPLLCKILKSREELETATICNGNTSRKRKRFGKDEQVETALVGWFDQVRDKNASVNGPILRAKAESLAKQLGKEDFVATEGWFRRFTNRHNLVYRKPCGEQADADVSAAESWIKDVWPTLIDQYSPDDIFNADETGIYYRALPETTYVFKSEALKGFKVAKDRITVLCCCSMSGEKEELLVIGKSKNPRCFKNVKNLPVSYSANKNAWMTLEIFKEWLVQWDRRLNRNILLLVDNCTAHNVDLTFRHIKIVFMPPNTTSLIQPLDQGVIRTLKAYYRNEMRQRVLEQIEGNMQGLSAAELSTKTDLLSALHLLKHGWDSVTKLTISNCFKKGGFFPKSELVEVLCELPCPDDLLQVEFEEWLDIDSNLTTAAPVTEKDVCDNILNHDDEELSSSEEEMEYENSVPSHKEVIDALATIRRFVQCRGTVDNFNDTYAFIKIPRDESDVEAKRNKGTWDLSDMHKAVEKVLNKEMSARQAADRFKVSRTTLNGRISAIINNKEVSIKPAMGCFHATFLPEHEEILVKHIKDLANRLISLSKQEFLKLSFQLAEKLKIPHQFNKEEMSAGKNDYYAFMKRHGDLSLRTAESISLMRAVAFNRPQVERFFDCLESLIEKYDFTHYKILNCDETGVSIVSTHSKVIATKNQKQIGKLTSAERGKNVTVLFVMSAGCQFVPPFFMLPRSRMNERLMINAPYESVVFQSYRTKPSSVLDGHANHKYLDVILFARENHIHMLSTPPYRTHKLQPLDHTFMKSFKSAYSDACDLWMRSNAGIRNIFSDLDFIASDMTNIADNSPSFSQLTEPTPSTSAHAPQPTASNFEPHVNPSRQSEAQTASSNTESQTAYEKSEPQTSAIIDQSVLTQTPIQEETICPLCFESHDEDWIQRGNCKSWVHESCANISELSNQYICDYCIII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -