Basic Information

Gene Symbol
ct
Assembly
GCA_952773005.1
Location
OX731680.1:479239652-479276438[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.8e-28 3.3e-23 83.5 0.0 2 72 523 594 522 599 0.95
2 3 2.1e-31 7.7e-27 95.1 0.1 3 77 961 1036 959 1038 0.96
3 3 1.1e-31 4.3e-27 95.9 0.1 3 76 1181 1255 1179 1258 0.96

Sequence Information

Coding Sequence
ATGATAATCTCTCTTTCAGAAGCAGCGGAATTTCCTTTTGGTGCTCTATCTGCcagcggcggcggcggcggcggcgaaCCCTTTCTTCCCTCTGTTGCGACGACCGACAGCCGTTACATTTCGCCTGTTCGGCACTGCGCTCCCGAAACAATAGACGGCCGATTGACGCGCACGGCCATCTTTCGCCATATCTCTGCTCAGTTGTACACCTATGCGAGCGGGCGCGAGTCAGAACGTGCGAGCGAGCACGTCTCCGTCTTGGACGGACTGGGCCCCGTCTCCGCGTCCGGGCCCcgcATCTCACAACTAGTAGATGACTTACATAAACTGCAGTCTAGTATGGGCAAACTGCAAGAAACCACGGCTACTCAAATAGCCAGACTAGAAGAAGAACTGAATCACCGAAGGCAACATATTCTTCGCTTGGAGGCTCGATTAGAAGCGCAGCGTGATTACGAAGAAGTTAAAAGGCAACTtggTTTGCTACGTTCAGTCGAATTACGTCCGGACAGTAGAAACCAGTTGGCTTGTCGAGCAGACTCTCCGTCAATTGCCGGCACCCTAGTAGAGGATAGATTGAAACAGGACAACAACGGTACCGTATCGAAGCGTTCTTGTAGATCGGCATCACCGTCGGATATGCAAACCGAAACGACAACCACCAATGGCTTCACCAGTCATCCTCAATCGGTTTCGCTGGCAGCGACCGACGCCAATTCCTCCTTTCCTTCCAACGCGTTGCAGAACGTCGAACAGTTCGGTTCGTTTTTGGGCGAGGAAATTGTCGCCAACTGGAGAAAATCCTTGGAGAGGGCCATCATCAGTCAGTCCTCCTCGTCTGGCACGTCTCCACCTCCAGCGACCGCCATCATGTCCAATATAACGCTTCCGACCAGTGTCGCTACTAAACCGTTTCAATTACCATCTTCGTCTCCGTCTCCGATGCCGGCCAATTTATCGTCACCGGGTTCGGTCGGCGGAGCGCGATCACCACCACCGCAACTTGACTCGTCATCTCGTAAAGTAGATTATTCGACCGAGTGTCAAGAAAGCGCCGACGAAAACGgACACTTAAAACGGAGCAGCAATCAGAGCGATATATCTGATCGCGAATCGGCTATAGTGTCGTCGAGAGATAATACGCCAAAGTCGCCGATAGGATCGGATTCGGCGGTCTCATCGATTGATCAGCATCAAGGATCGAATAGAACGGAGCCGATAACTCCGTGTAAGTCACCGGCCAGCGGTAGCGAGTCGGAAATTACAGCTAGTCGAAGTTCACCTACGTCTATGATGAATTCATCGTCGATACCGGCCGGCCTTACCAGCGGAATGATTAACGGCCTGTGCGGCCTAAACATAGCCGGCTTGAATAATAATTTGCCCATCGGTTTCGACGTACTGAAGCCCCCTTTTCGCATGGACGACATCAGACCCGCTTACAGATTTGCTGATGACAGTCCGGGGGCGATGGTTGGCAGATTCGGCGAGTCATTGATACCGAAAGGCGATCCGATGGAGGCCCGATTGCAGGAGATGTTGCGTTACAATATGGACAAATACTCCTCGCAAAACCTGGACACGTTGACGATAGCTAGAAGAGTGCGCGAACTACTTTCGATACACAATGTCGGTCAACGACTGTTCGCCAAATATGTACTAGGATTGTCCCAAGGCACCGTTTCCGAACTGCTGTCGAAACCGAAACCCTGGGACAAGCTGACGGAAAAAGGTCGAGACAGCTATCGAAAAATGCACGCCTGGGCTTGCGACGAGAATTCCGTTATGCTTCTGAAGTCGCTGATTCCGAAAAAAGGTAAAGAACCGGGAATGCAACCTGTTTTTGGCGGCGGAAGGACTGATGCGGATATCACGGACGAACGAATAGCACATATTTTGAACGAAGCCAGTCATTTGATGAAATCGTCTCATCCGTCGGGACCACCGGATCACGACAGTCGTAGTAATGACGATAATAAATCCCTCAATGATGGACAGTGTCCATCACCAGTCAGTCGAGATGGATACGGAAGtagaaaattcagaaaatacGAACATGACGACGTATCGCACGATCAAGTAATTCGAATTTATCAGGAAGAACTGGCAAAGTTGATGGGCCGACGCTTAGAAGAACATCCATTCCCGGGatttattttccCGCCCTTTTTCGGAAATGCCACGGGCGCGGTTGGCGGTACTCCGACAAATCCGGAAGACATTCGCATGACTCTGGACGCCTATCACAGAGAATTAGCAAAATTGCAGAAGTGCCCTACGAATCAAATTAGTCAAAACGTATCCGGTCTCTTGTCGATgcaacaacaacagcaacagcaacagcagcagcagcaacaacaacaacaacaacaacaacagtcTTCGTCCGGCGGAGGCCTGCAGAACGGTATCATTCAAGACCTGAGTGTACCGAAAAATGACCGGAAATCGGAGACCGGCTCGTCGGCGATTAAACTGACAAACGGCGATATATCGACGACCATAGCAGAGCATCGGAGTAACGATTCGAAAAAGGAGCAACTGCTGAACAGCGTCTGCTTAACGAGTTCCATTAGAGCGACATCGAACGGCACGGCCGAACTGAGCTCGGAATCGGCCAAACATGCTGGAAGCGCATTTTCTCTCGTCAGACCAAAAACCGAACCAGgtGTAACCTCAGCTAGCAGTTCGCCGCTAGGCAACTCAATTTTACCGCCGGAAGACTTCTCTCCATCTGCTTCAGTAAGTCCATTGCAAAGGATGGCTTCGATAACAAATTCGCTGATCTCACAACCGCCTTCCACGCATCATCATGCTCCGTCTCAAAGGCCGCTGAAAGCCGTTCTGCCGCCTATAACCCAGCAGCAGTTtgatcaatttaataatttaaatacggaAGATATCGTTCGTAAGGTGAAAGAACAGCTTAGTCAATTTTCAATTAGTCAGCGATTATTCGGAGAATCGGTACTGGGGCTGTCGCAAGGCAGCGTGTCCGATCTGTTGGCCAGACCGAAACCGTGGCACATGTTAACGCAAAAGGGCCGAGAACCGTTTATAAGGATGAAGATGTTTCTAGAGGACGAAAACGCCGTCCACAAGTTGGTAGCTTCGCAGTACAAAATCGCGCCGGAAAAACTAATGAGAACCGGCGGCTACGGAGCCCCGGCCACCTTTCCGCAGACAAATTGCAATAAATTACCGTCTTCCGGTATGGATCATATCAAATCGGAAAATAATTCGGATCGAAGTTCCATCAGTTCGCACCATAACTATCTGCAGCAACAGCAAACGCCGCAACAACAGACGCATCATCAAACGTCGCATCAAGTTCATCCGCCAACACCGTCACCGATAATCGGCGGCGCCGCTCATCATATGTCGCCgatcgaatttttcaaaaagtccTACAATCTAGCTGCAGTGAACAATCATCAGACGTGCAATAATGTCATGACGCAGTCGCAACAGCACATGAATCAGCTCAGAAGTATAGGACACCACGTTAGTCCGTCCGTCTACGAAATGGCCGCTTTAACGCAAGAATTGGACACGCAGACCATCACGACCAAAATAAAAGAAGCTCTGCTGGCAAATAACATCGGGCAAAAGATTTTCGGAGAAGTGGTGCTGGGGCTGTCGCAAGGATCGGTCAGCGAATTATTATCGAAGCCGAAACCGTGGCACATGTTAAGCATCAAAGGCAGAGAGCCGTTCATACGAATGCAGCTGTGGCTGTCCGACAGTCATAATATCGAAAGATTGCAAGCGTTGAAAACGGAACGACGAGAACTGAACAAACGGCGACGCGGCTCCGGACAGGATAACAGTAGCGATACGTCTTCCAACGACACGTCCGAATTTTACGGCAGCGGAAGCGCGAACAGTCCGCCGTCGGCCGCTAAGAAACAGCGAGTACTGTTCAGCGAGGAACAGAAAGAAGCGCTGAAATTGGCGTTCACATTGGACGCTTATCCGAGCGTGGCGACCATCGAATTTTTGGCCAGCGAACTCGGTCTCTCTTCGCGAACGATCACCAACTGGTTTCACAATCATCGCATGCGACTGAAGCAGCAGCAGTCGCCACATTCCGAATCGTCCCAGATCAACAGGGACGTGCAAGGAGCTACCGGCGGCTCCGGCTTCGATCCGGTTCAGTTCCGACTGCTGCTTAGTCAGCGACTGGGCTTCTCGGCACTGTCGTCCTTATCGTTCCCGCACCCGTACTTCCCTTCGAACCCGGAATTCGCGGCCGCCCTGATGTCGCGAAATCTCATGCCGAATAGCGAACAAATGTCCGGCCTAGATTTGAGCTTGAAACGCGAAGACGTCACCTCAGAGGATGAccaggaggaggaggaggacgAGGACGCGGCGCAGGACGACGAGAACGATAGTCACGTCGATTCCGAAGACGACATCAGCGATCTAGCGCCCGCCGCCGAAGTGACGCCTCGTTCCGCCTCGTCCGCGGTCAACGAGTCGCGGAGTTCCCGACGGAAACCGGCTGCGCCGCAATGGGTCAATCCGGACTGGCAAGAGGAGTCCGCAGCGGACGAAGTAATCATAAACGGCGTATGCGTCATGCAAACGGACGAATACGAAACCGATCGGGAACCGGACGAAGCGCATCGTGCGGTTCTGATTGAGCCGTCCTTGTCGGCTTCTTCCGGCGCCGCCTTGGCTCAAGAAGAGGAGGTGGaggacgacgacgacgacgatgacgaTCAGCCGAACGAACAAGATTGCTCGTTGTCGCCGAGTTCGTTGAATGACGGCAAAGAGGACAACAATAACCGGACGAGCGCCGTCAGTTTCGCTACCAGTCAGTCCAGTCCGGTTATTGTTAAGGAGGATCAGCGGCAAGGCGAAAATCTGTCCGTAAAATCGAAGCCAGATCAAAAGGAAACGTGGGACGACCAGTACTGA
Protein Sequence
MIISLSEAAEFPFGALSASGGGGGGEPFLPSVATTDSRYISPVRHCAPETIDGRLTRTAIFRHISAQLYTYASGRESERASEHVSVLDGLGPVSASGPRISQLVDDLHKLQSSMGKLQETTATQIARLEEELNHRRQHILRLEARLEAQRDYEEVKRQLGLLRSVELRPDSRNQLACRADSPSIAGTLVEDRLKQDNNGTVSKRSCRSASPSDMQTETTTTNGFTSHPQSVSLAATDANSSFPSNALQNVEQFGSFLGEEIVANWRKSLERAIISQSSSSGTSPPPATAIMSNITLPTSVATKPFQLPSSSPSPMPANLSSPGSVGGARSPPPQLDSSSRKVDYSTECQESADENGHLKRSSNQSDISDRESAIVSSRDNTPKSPIGSDSAVSSIDQHQGSNRTEPITPCKSPASGSESEITASRSSPTSMMNSSSIPAGLTSGMINGLCGLNIAGLNNNLPIGFDVLKPPFRMDDIRPAYRFADDSPGAMVGRFGESLIPKGDPMEARLQEMLRYNMDKYSSQNLDTLTIARRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENSVMLLKSLIPKKGKEPGMQPVFGGGRTDADITDERIAHILNEASHLMKSSHPSGPPDHDSRSNDDNKSLNDGQCPSPVSRDGYGSRKFRKYEHDDVSHDQVIRIYQEELAKLMGRRLEEHPFPGFIFPPFFGNATGAVGGTPTNPEDIRMTLDAYHRELAKLQKCPTNQISQNVSGLLSMQQQQQQQQQQQQQQQQQQQQSSSGGGLQNGIIQDLSVPKNDRKSETGSSAIKLTNGDISTTIAEHRSNDSKKEQLLNSVCLTSSIRATSNGTAELSSESAKHAGSAFSLVRPKTEPGVTSASSSPLGNSILPPEDFSPSASVSPLQRMASITNSLISQPPSTHHHAPSQRPLKAVLPPITQQQFDQFNNLNTEDIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGAPATFPQTNCNKLPSSGMDHIKSENNSDRSSISSHHNYLQQQQTPQQQTHHQTSHQVHPPTPSPIIGGAAHHMSPIEFFKKSYNLAAVNNHQTCNNVMTQSQQHMNQLRSIGHHVSPSVYEMAALTQELDTQTITTKIKEALLANNIGQKIFGEVVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSHNIERLQALKTERRELNKRRRGSGQDNSSDTSSNDTSEFYGSGSANSPPSAAKKQRVLFSEEQKEALKLAFTLDAYPSVATIEFLASELGLSSRTITNWFHNHRMRLKQQQSPHSESSQINRDVQGATGGSGFDPVQFRLLLSQRLGFSALSSLSFPHPYFPSNPEFAAALMSRNLMPNSEQMSGLDLSLKREDVTSEDDQEEEEDEDAAQDDENDSHVDSEDDISDLAPAAEVTPRSASSAVNESRSSRRKPAAPQWVNPDWQEESAADEVIINGVCVMQTDEYETDREPDEAHRAVLIEPSLSASSGAALAQEEEVEDDDDDDDDQPNEQDCSLSPSSLNDGKEDNNNRTSAVSFATSQSSPVIVKEDQRQGENLSVKSKPDQKETWDDQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00833855;
90% Identity
iTF_00833855;
80% Identity
iTF_00833855;