Hcos001417.1
Basic Information
- Insect
- Hypsopygia costalis
- Gene Symbol
- GATA-B
- Assembly
- GCA_937001695.2
- Location
- CAKZJU020000026.1:169646-185028[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3 7.2e+03 -2.1 0.1 11 16 37 42 36 43 0.80 2 3 7.4e-18 4e-14 53.1 3.9 1 34 187 219 187 221 0.97 3 3 7.1e-19 3.8e-15 56.4 7.0 1 34 256 288 256 290 0.97
Sequence Information
- Coding Sequence
- ATGCATCTATTGTACGTGGTGCCGGCGATAACAGGCGACGATTGCATCTCGTCGACGACCAGCTCTACACGTACTGCGGAATTCTTTCCATACCACGAATGGAAATTTAATTGGAGACGTGGCGACACTCTTGTcggcggcggcggcgcggtgTTCTCGCGCGGCGCGTACGGCGGCGGCTCCCCGTACTTCACCGGCGCAGAGCTGGCCGCGCAGCCCGCGGCCTGGCCGCCCGGACAAGGTTCCCCGACGTACCGGGTGTCGGAGAGCGGCGCGGGCAGCGGCGCGGGCACGCCCGCCTTCTCGTCGGAGTACGGcgagggcggcgcggcggcgggggcgggcggcggcggcgagggCTGCGCGCCGCTGCCCGCCTTCAGCGCGCGCTTCGGCGGCGCCTTCGCCTGCTCCGCCGCGCGGCCCGCCGTCTACAGCGCCGCCAACACCTACACACAGGACGTGTGGAGCCTGGACAACAGCCGCCGGCCGCAGCTGTCCGCCGCTGCCAGCCTCTCTGCAATCGAGATGGCGGAGTTTTTCACGGACGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGGCACGCCGCGCTCGCGCTCGCCGCGCCCGCCCACGACATGGGGTCGAAGCGGCCCGGCATGTCGTGCACCAACTGCCACACGACCACGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTGTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAGCATCAACAGGCCCATGGCCATGAAGAAGGACTCCATACAGACGAGAAAGCGGAAGCCTAAGAACAGTATGAAAACAGAAAGAAATATCAAGAACACGGTGCAGCGCAGCATCGCCTCAGGAGTCAAAATTGAAAACTTGTTGGAGACGGGGTCCGCGACGGGCGCGGGCGTGGCGCGGTCGCCGGGCGGGCTGTACTACGTGCAGCACGCCATGAAGCTGGAGGAGCCCCCGCCGGCGCACGCGCACGTGCACGGGCACGCGCACGCGCACGGGCACGCGCACGCGcacggcgcggcggcgggcgcgctcTACGACGACGAGTACCGGCGCGAGCCCGAGCGCGTGGAGCGGCCCACCGTGGTCTCCCTCGGCAGCTGA
- Protein Sequence
- MHLLYVVPAITGDDCISSTTSSTRTAEFFPYHEWKFNWRRGDTLVGGGGAVFSRGAYGGGSPYFTGAELAAQPAAWPPGQGSPTYRVSESGAGSGAGTPAFSSEYGEGGAAAGAGGGGEGCAPLPAFSARFGGAFACSAARPAVYSAANTYTQDVWSLDNSRRPQLSAAASLSAIEMAEFFTDGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAALALAAPAHDMGSKRPGMSCTNCHTTTTSLWRRNAHGETVCNACGLYYKLHSINRPMAMKKDSIQTRKRKPKNSMKTERNIKNTVQRSIASGVKIENLLETGSATGAGVARSPGGLYYVQHAMKLEEPPPAHAHVHGHAHAHGHAHAHGAAAGALYDDEYRREPERVERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -